RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 KRT27Q7Z3Y8 459 aa28.54■■■□□ 2.16
CCHCR1-207ENST00000448162 TONSLQ96HA7 1378 aa28.53■■■□□ 2.16
CCHCR1-207ENST00000448162 WASLO00401 505 aaPredicted RBP28.53■■■□□ 2.16
CCHCR1-207ENST00000448162 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
CCHCR1-207ENST00000448162 NRAPQ86VF7 1730 aa28.52■■■□□ 2.16
CCHCR1-207ENST00000448162 CLSPNQ9HAW4 1339 aa28.51■■■□□ 2.15
CCHCR1-207ENST00000448162 CCDC9Q9Y3X0 531 aaKnown RBP28.51■■■□□ 2.15
CCHCR1-207ENST00000448162 TULP4Q9NRJ4 1543 aa28.51■■■□□ 2.15
CCHCR1-207ENST00000448162 ALS2Q96Q42 1657 aa28.5■■■□□ 2.15
CCHCR1-207ENST00000448162 BTG4Q9NY30 223 aa28.48■■■□□ 2.15
CCHCR1-207ENST00000448162 SF3B2Q13435 895 aaKnown RBP28.47■■■□□ 2.15
CCHCR1-207ENST00000448162 ROCK2O75116 1388 aaKnown RBP28.47■■■□□ 2.15
CCHCR1-207ENST00000448162 EIF3AQ14152 1382 aaKnown RBP28.46■■■□□ 2.15
CCHCR1-207ENST00000448162 CENPJQ9HC77 1338 aaPredicted RBP28.45■■■□□ 2.15
CCHCR1-207ENST00000448162 FAM98CQ17RN3 349 aaKnown RBP28.45■■■□□ 2.14
CCHCR1-207ENST00000448162 ATP7BP35670 1465 aa28.44■■■□□ 2.14
CCHCR1-207ENST00000448162 CRYBG1Q9Y4K1 1723 aa28.43■■■□□ 2.14
CCHCR1-207ENST00000448162 COL14A1Q05707 1796 aaKnown RBP28.42■■■□□ 2.14
CCHCR1-207ENST00000448162 QRICH2Q9H0J4 1663 aa28.42■■■□□ 2.14
CCHCR1-207ENST00000448162 CDK19Q9BWU1 502 aa28.41■■■□□ 2.14
CCHCR1-207ENST00000448162 SPATA31A5Q5VU36 1347 aa28.41■■■□□ 2.14
CCHCR1-207ENST00000448162 SPATA31A7Q8IWB4 1347 aa28.41■■■□□ 2.14
CCHCR1-207ENST00000448162 NUDT16Q96DE0 195 aaKnown RBP28.38■■■□□ 2.13
CCHCR1-207ENST00000448162 TIMELESSQ9UNS1 1208 aa28.38■■■□□ 2.13
CCHCR1-207ENST00000448162 LRP5O75197 1615 aa28.38■■■□□ 2.13
CCHCR1-207ENST00000448162 TOPAZ1Q8N9V7 1692 aa28.38■■■□□ 2.13
CCHCR1-207ENST00000448162 A0A0G2JS52 829 aa28.37■■■□□ 2.13
CCHCR1-207ENST00000448162 MYT1Q01538 1121 aa28.37■■■□□ 2.13
CCHCR1-207ENST00000448162 BAG6P46379 1132 aa28.36■■■□□ 2.13
CCHCR1-207ENST00000448162 FAM182BQ5T319 152 aa28.36■■■□□ 2.13
CCHCR1-207ENST00000448162 THSD7AQ9UPZ6 1657 aa28.35■■■□□ 2.13
CCHCR1-207ENST00000448162 ITSN1Q15811 1721 aa28.35■■■□□ 2.13
CCHCR1-207ENST00000448162 NGDNQ8NEJ9 315 aaKnown RBP28.35■■■□□ 2.13
CCHCR1-207ENST00000448162 PSDA5PKW4 1024 aaPredicted RBP28.34■■■□□ 2.13
CCHCR1-207ENST00000448162 CARD11Q9BXL7 1154 aa28.33■■■□□ 2.13
CCHCR1-207ENST00000448162 EN1Q05925 392 aaPredicted RBP28.32■■■□□ 2.12
CCHCR1-207ENST00000448162 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
CCHCR1-207ENST00000448162 PLEKHG3A1L390 1219 aa28.31■■■□□ 2.12
CCHCR1-207ENST00000448162 PAK3O75914 559 aaPredicted RBP28.31■■■□□ 2.12
CCHCR1-207ENST00000448162 PRDM11Q9NQV5 511 aa28.31■■■□□ 2.12
CCHCR1-207ENST00000448162 CCDC61Q9Y6R9 512 aa28.31■■■□□ 2.12
CCHCR1-207ENST00000448162 DISP2A7MBM2 1401 aa28.3■■■□□ 2.12
CCHCR1-207ENST00000448162 POLR3AO14802 1390 aaPredicted RBP28.3■■■□□ 2.12
CCHCR1-207ENST00000448162 KIAA0232Q92628 1395 aa28.29■■■□□ 2.12
CCHCR1-207ENST00000448162 SPATA31A1Q5TZJ5 1347 aa28.29■■■□□ 2.12
CCHCR1-207ENST00000448162 RGPD1P0DJD0 1748 aa28.27■■■□□ 2.12
CCHCR1-207ENST00000448162 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
CCHCR1-207ENST00000448162 CHRNA2Q15822 529 aa28.25■■■□□ 2.11
CCHCR1-207ENST00000448162 TNS1Q9HBL0 1735 aaKnown RBP28.25■■■□□ 2.11
CCHCR1-207ENST00000448162 EVC2Q86UK5 1308 aa28.24■■■□□ 2.11
CCHCR1-207ENST00000448162 PHRF1Q9P1Y6 1649 aaKnown RBP28.24■■■□□ 2.11
CCHCR1-207ENST00000448162 SRPK2P78362 688 aaKnown RBP28.23■■■□□ 2.11
CCHCR1-207ENST00000448162 CCER1Q8TC90 406 aaPredicted RBP28.23■■■□□ 2.11
CCHCR1-207ENST00000448162 ACEP12821 1306 aa28.22■■■□□ 2.11
CCHCR1-207ENST00000448162 PPIP5K1Q6PFW1 1433 aa28.21■■■□□ 2.11
CCHCR1-207ENST00000448162 ZC3H6P61129 1189 aaKnown RBP28.2■■■□□ 2.1
CCHCR1-207ENST00000448162 R3HDM1Q15032 1099 aaKnown RBP28.2■■■□□ 2.1
CCHCR1-207ENST00000448162 EZH2Q15910 746 aaKnown RBP28.2■■■□□ 2.1
CCHCR1-207ENST00000448162 NUTM2GQ5VZR2 741 aa28.2■■■□□ 2.1
CCHCR1-207ENST00000448162 CAMKK2Q96RR4 588 aa28.2■■■□□ 2.1
CCHCR1-207ENST00000448162 TESK2Q96S53 571 aa28.18■■■□□ 2.1
CCHCR1-207ENST00000448162 STRN4Q9NRL3 753 aa28.18■■■□□ 2.1
CCHCR1-207ENST00000448162 TRIM37O94972 964 aa28.16■■■□□ 2.1
CCHCR1-207ENST00000448162 FAM196AQ6ZSG2 479 aa28.16■■■□□ 2.1
CCHCR1-207ENST00000448162 SSH2Q76I76 1423 aa28.16■■■□□ 2.1
CCHCR1-207ENST00000448162 CAMTA1Q9Y6Y1 1673 aa28.16■■■□□ 2.1
CCHCR1-207ENST00000448162 BARGINQ6ZT62 677 aa28.15■■■□□ 2.1
CCHCR1-207ENST00000448162 CABP1Q9NZU7 370 aa28.15■■■□□ 2.1
CCHCR1-207ENST00000448162 NRKQ7Z2Y5 1582 aa28.15■■■□□ 2.1
CCHCR1-207ENST00000448162 ST20-MTHFSA0A0A6YYL1 179 aa28.13■■■□□ 2.09
CCHCR1-207ENST00000448162 USP19O94966 1318 aa28.13■■■□□ 2.09
CCHCR1-207ENST00000448162 CPDO75976 1380 aa28.12■■■□□ 2.09
CCHCR1-207ENST00000448162 USP35Q9P2H5 1018 aa28.12■■■□□ 2.09
CCHCR1-207ENST00000448162 LMO7Q8WWI1 1683 aa28.12■■■□□ 2.09
CCHCR1-207ENST00000448162 BRD4O60885 1362 aaPredicted RBP28.11■■■□□ 2.09
CCHCR1-207ENST00000448162 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
CCHCR1-207ENST00000448162 PUS7Q96PZ0 661 aaKnown RBP28.11■■■□□ 2.09
CCHCR1-207ENST00000448162 ABTB2Q8N961 1025 aa28.09■■■□□ 2.09
CCHCR1-207ENST00000448162 PARD3Q8TEW0 1356 aa28.09■■■□□ 2.09
CCHCR1-207ENST00000448162 USP47Q96K76 1375 aa28.09■■■□□ 2.09
CCHCR1-207ENST00000448162 USP6P35125 1406 aa28.09■■■□□ 2.09
CCHCR1-207ENST00000448162 CPSF1Q10570 1443 aaKnown RBP28.09■■■□□ 2.09
CCHCR1-207ENST00000448162 APBA3O96018 575 aa28.08■■■□□ 2.09
CCHCR1-207ENST00000448162 AKAP12Q02952 1782 aa28.07■■■□□ 2.08
CCHCR1-207ENST00000448162 EVA1CP58658 441 aa28.07■■■□□ 2.08
CCHCR1-207ENST00000448162 TCP11L2Q8N4U5 519 aa28.06■■■□□ 2.08
CCHCR1-207ENST00000448162 CD163L1Q9NR16 1453 aa28.04■■■□□ 2.08
CCHCR1-207ENST00000448162 GCP02774 474 aa28.04■■■□□ 2.08
CCHCR1-207ENST00000448162 PDE3BQ13370 1112 aa28.04■■■□□ 2.08
CCHCR1-207ENST00000448162 RREB1Q92766 1687 aa28.03■■■□□ 2.08
CCHCR1-207ENST00000448162 SLC24A1O60721 1099 aa28.02■■■□□ 2.08
CCHCR1-207ENST00000448162 ZNF692Q9BU19 519 aaPredicted RBP28.02■■■□□ 2.08
CCHCR1-207ENST00000448162 COL5A2P05997 1499 aaPredicted RBP28.02■■■□□ 2.08
CCHCR1-207ENST00000448162 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
CCHCR1-207ENST00000448162 THRAP3Q9Y2W1 955 aaKnown RBP28.01■■■□□ 2.07
CCHCR1-207ENST00000448162 NUP188Q5SRE5 1749 aa27.99■■■□□ 2.07
CCHCR1-207ENST00000448162 MON2Q7Z3U7 1717 aa27.98■■■□□ 2.07
CCHCR1-207ENST00000448162 PARP4Q9UKK3 1724 aaKnown RBP27.97■■■□□ 2.07
CCHCR1-207ENST00000448162 PIK3C2AO00443 1686 aa27.97■■■□□ 2.07
CCHCR1-207ENST00000448162 SLC12A5Q9H2X9 1139 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms