RNA–Protein interactions for RNA: ENST00000448152.2

GAPDHP16-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 16, humanhuman

BASIC

Gene GAPDHP16, Length 962 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP16-201ENST00000448152 SHANK2Q9UPX8 1470 aa10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 SEMA3EO15041 775 aa10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 PRIM1P49642 420 aaKnown RBP10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 HDGFP51858 240 aaKnown RBP10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 NEURL4Q96JN8 1562 aa10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 POLR1AO95602 1720 aaPredicted RBP10.3□□□□□ -0.76
GAPDHP16-201ENST00000448152 CLTCQ00610 1675 aaKnown RBP10.29□□□□□ -0.76
GAPDHP16-201ENST00000448152 LRCH3Q96II8 777 aa10.29□□□□□ -0.76
GAPDHP16-201ENST00000448152 ABCC1P33527 1531 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 NUTM2FA1L443 756 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 SOWAHBA6NEL2 793 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 RANGAP1P46060 587 aaPredicted RBP10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 ANP32EQ9BTT0 268 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 DNMT1P26358 1616 aaKnown RBP10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 ITSN2Q9NZM3 1697 aa10.28□□□□□ -0.76
GAPDHP16-201ENST00000448152 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.76
GAPDHP16-201ENST00000448152 VWDEQ8N2E2 1590 aa10.27□□□□□ -0.76
GAPDHP16-201ENST00000448152 TATDN2Q93075 761 aa10.27□□□□□ -0.77
GAPDHP16-201ENST00000448152 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.27□□□□□ -0.77
GAPDHP16-201ENST00000448152 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
GAPDHP16-201ENST00000448152 KDM2AQ9Y2K7 1162 aa10.27□□□□□ -0.77
GAPDHP16-201ENST00000448152 A2ML1A8K2U0 1454 aa10.26□□□□□ -0.77
GAPDHP16-201ENST00000448152 TESPA1A2RU30 521 aaPredicted RBP10.26□□□□□ -0.77
GAPDHP16-201ENST00000448152 NECTIN2Q92692 538 aa10.26□□□□□ -0.77
GAPDHP16-201ENST00000448152 PNMA3Q9UL41 463 aa10.26□□□□□ -0.77
GAPDHP16-201ENST00000448152 SETD1AO15047 1707 aaKnown RBP10.25□□□□□ -0.77
GAPDHP16-201ENST00000448152 FCHSD2O94868 740 aa10.25□□□□□ -0.77
GAPDHP16-201ENST00000448152 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
GAPDHP16-201ENST00000448152 PTGDRQ13258 359 aa10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 POTEAQ6S8J7 498 aa10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 PREX2Q70Z35 1606 aa10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 RNF17Q9BXT8 1623 aaKnown RBP10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 TROQ12816 1431 aaPredicted RBP10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 RRBP1Q9P2E9 1410 aaKnown RBP10.24□□□□□ -0.77
GAPDHP16-201ENST00000448152 BCAMP50895 628 aa10.23□□□□□ -0.77
GAPDHP16-201ENST00000448152 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
GAPDHP16-201ENST00000448152 NPDC1Q9NQX5 325 aaPredicted RBP10.23□□□□□ -0.77
GAPDHP16-201ENST00000448152 TSR3Q9UJK0 312 aaKnown RBP10.23□□□□□ -0.77
GAPDHP16-201ENST00000448152 PLXNC1O60486 1568 aa10.22□□□□□ -0.77
GAPDHP16-201ENST00000448152 NUDT18Q6ZVK8 323 aa10.22□□□□□ -0.77
GAPDHP16-201ENST00000448152 DHX57Q6P158 1386 aaKnown RBP10.22□□□□□ -0.77
GAPDHP16-201ENST00000448152 MAP3K1Q13233 1512 aa10.22□□□□□ -0.77
GAPDHP16-201ENST00000448152 SAMD9LQ8IVG5 1584 aa10.22□□□□□ -0.77
GAPDHP16-201ENST00000448152 STRCP1A6NGW2 1772 aa10.21□□□□□ -0.77
GAPDHP16-201ENST00000448152 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
GAPDHP16-201ENST00000448152 SYNMO15061 1565 aa10.21□□□□□ -0.78
GAPDHP16-201ENST00000448152 SMAPO00193 183 aa10.2□□□□□ -0.78
GAPDHP16-201ENST00000448152 LRRC7Q96NW7 1537 aa10.2□□□□□ -0.78
GAPDHP16-201ENST00000448152 HPS5Q9UPZ3 1129 aa10.2□□□□□ -0.78
GAPDHP16-201ENST00000448152 DEPDC5O75140 1603 aa10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 PPP4CP60510 307 aa10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 HIC1Q14526 733 aa10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 ERICH6BQ5W0A0 696 aa10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 RBM46Q8TBY0 533 aaKnown RBP10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
GAPDHP16-201ENST00000448152 MED14O60244 1454 aa10.18□□□□□ -0.78
GAPDHP16-201ENST00000448152 SAMD7Q7Z3H4 446 aa10.18□□□□□ -0.78
GAPDHP16-201ENST00000448152 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
GAPDHP16-201ENST00000448152 ATP7AQ04656 1500 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 NPHP4O75161 1426 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 CCER2I3L3R5 266 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 NEFLP07196 543 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 SLF2Q8IX21 1173 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 ATP1B4Q9UN42 357 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 IQGAP1P46940 1657 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 INO80Q9ULG1 1556 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 A2MP01023 1474 aa10.17□□□□□ -0.78
GAPDHP16-201ENST00000448152 CDC42BPAQ5VT25 1732 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 IFFO2Q5TF58 517 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 ANKLE2Q86XL3 938 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 WBP1LQ9NX94 342 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
GAPDHP16-201ENST00000448152 TNRQ92752 1358 aa10.15□□□□□ -0.78
GAPDHP16-201ENST00000448152 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.78
GAPDHP16-201ENST00000448152 RNF40O75150 1001 aa10.15□□□□□ -0.78
GAPDHP16-201ENST00000448152 GGT6Q6P531 493 aa10.15□□□□□ -0.78
GAPDHP16-201ENST00000448152 OATP04181 439 aa10.14□□□□□ -0.79
GAPDHP16-201ENST00000448152 DNAJB2P25686 324 aa10.14□□□□□ -0.79
GAPDHP16-201ENST00000448152 RBM26Q5T8P6 1007 aaKnown RBP10.14□□□□□ -0.79
GAPDHP16-201ENST00000448152 XIRP1Q702N8 1843 aaKnown RBP10.13□□□□□ -0.79
GAPDHP16-201ENST00000448152 GPIHBP1Q8IV16 184 aa10.13□□□□□ -0.79
GAPDHP16-201ENST00000448152 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
GAPDHP16-201ENST00000448152 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
GAPDHP16-201ENST00000448152 FBXO31Q5XUX0 539 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP16-201ENST00000448152 EYA1Q99502 592 aa10.12□□□□□ -0.79
GAPDHP16-201ENST00000448152 ADGRG1Q9Y653 693 aa10.12□□□□□ -0.79
GAPDHP16-201ENST00000448152 UGGT1Q9NYU2 1555 aa10.12□□□□□ -0.79
GAPDHP16-201ENST00000448152 ADGBQ8N7X0 1667 aa10.12□□□□□ -0.79
GAPDHP16-201ENST00000448152 PZPP20742 1482 aa10.11□□□□□ -0.79
GAPDHP16-201ENST00000448152 FAM135BQ49AJ0 1406 aa10.11□□□□□ -0.79
GAPDHP16-201ENST00000448152 GNPATO15228 680 aa10.11□□□□□ -0.79
GAPDHP16-201ENST00000448152 ITGBL1O95965 494 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms