RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 ILDR2Q71H61 639 aa28.83■■■□□ 2.21
CCHCR1-206ENST00000448141 USP6P35125 1406 aa28.83■■■□□ 2.21
CCHCR1-206ENST00000448141 CRYBG1Q9Y4K1 1723 aa28.83■■■□□ 2.21
CCHCR1-206ENST00000448141 TMC1Q8TDI8 760 aa28.82■■■□□ 2.2
CCHCR1-206ENST00000448141 PUS7Q96PZ0 661 aaKnown RBP28.82■■■□□ 2.2
CCHCR1-206ENST00000448141 AFF2P51816 1311 aa28.81■■■□□ 2.2
CCHCR1-206ENST00000448141 TMF1P82094 1093 aa28.81■■■□□ 2.2
CCHCR1-206ENST00000448141 NGLY1Q96IV0 654 aa28.81■■■□□ 2.2
CCHCR1-206ENST00000448141 MON2Q7Z3U7 1717 aa28.8■■■□□ 2.2
CCHCR1-206ENST00000448141 BRD4O60885 1362 aaPredicted RBP28.79■■■□□ 2.2
CCHCR1-206ENST00000448141 POTEAQ6S8J7 498 aa28.79■■■□□ 2.2
CCHCR1-206ENST00000448141 CPSF1Q10570 1443 aaKnown RBP28.78■■■□□ 2.2
CCHCR1-206ENST00000448141 EIF4G2P78344 907 aaKnown RBP eCLIP28.78■■■□□ 2.2
CCHCR1-206ENST00000448141 NUTM2GQ5VZR2 741 aa28.78■■■□□ 2.2
CCHCR1-206ENST00000448141 SLC12A5Q9H2X9 1139 aa28.78■■■□□ 2.2
CCHCR1-206ENST00000448141 ZNF772Q68DY9 489 aaPredicted RBP28.77■■■□□ 2.2
CCHCR1-206ENST00000448141 ABTB2Q8N961 1025 aa28.77■■■□□ 2.2
CCHCR1-206ENST00000448141 ZNF692Q9BU19 519 aaPredicted RBP28.77■■■□□ 2.2
CCHCR1-206ENST00000448141 KTN1Q86UP2 1357 aaKnown RBP28.76■■■□□ 2.2
CCHCR1-206ENST00000448141 PHRF1Q9P1Y6 1649 aaKnown RBP28.76■■■□□ 2.2
CCHCR1-206ENST00000448141 NRKQ7Z2Y5 1582 aa28.76■■■□□ 2.19
CCHCR1-206ENST00000448141 CD163L1Q9NR16 1453 aa28.76■■■□□ 2.19
CCHCR1-206ENST00000448141 SSH2Q76I76 1423 aa28.76■■■□□ 2.19
CCHCR1-206ENST00000448141 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
CCHCR1-206ENST00000448141 PIK3C2AO00443 1686 aa28.74■■■□□ 2.19
CCHCR1-206ENST00000448141 NINLQ9Y2I6 1382 aa28.72■■■□□ 2.19
CCHCR1-206ENST00000448141 CDCA8Q53HL2 280 aa28.71■■■□□ 2.19
CCHCR1-206ENST00000448141 HDGFL2Q7Z4V5 671 aaPredicted RBP28.71■■■□□ 2.19
CCHCR1-206ENST00000448141 FNBP4Q8N3X1 1017 aaPredicted RBP28.71■■■□□ 2.19
CCHCR1-206ENST00000448141 PLCH1Q4KWH8 1693 aa28.7■■■□□ 2.19
CCHCR1-206ENST00000448141 TTC21BQ7Z4L5 1316 aa28.7■■■□□ 2.19
CCHCR1-206ENST00000448141 TERF2IPQ9NYB0 399 aa28.7■■■□□ 2.18
CCHCR1-206ENST00000448141 USP21Q9UK80 565 aa28.69■■■□□ 2.18
CCHCR1-206ENST00000448141 A0A1W2PP64 1363 aa28.69■■■□□ 2.18
CCHCR1-206ENST00000448141 NLRP13Q86W25 1043 aa28.68■■■□□ 2.18
CCHCR1-206ENST00000448141 MYOM1P52179 1685 aa28.67■■■□□ 2.18
CCHCR1-206ENST00000448141 USP19O94966 1318 aa28.67■■■□□ 2.18
CCHCR1-206ENST00000448141 TTC21AQ8NDW8 1320 aa28.67■■■□□ 2.18
CCHCR1-206ENST00000448141 NLRP6P59044 892 aa28.66■■■□□ 2.18
CCHCR1-206ENST00000448141 BCL9LQ86UU0 1499 aa28.66■■■□□ 2.18
CCHCR1-206ENST00000448141 COL14A1Q05707 1796 aaKnown RBP28.65■■■□□ 2.18
CCHCR1-206ENST00000448141 SLIT2O94813 1529 aa28.65■■■□□ 2.18
CCHCR1-206ENST00000448141 QTRT2Q9H974 415 aaKnown RBP28.65■■■□□ 2.18
CCHCR1-206ENST00000448141 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.65■■■□□ 2.18
CCHCR1-206ENST00000448141 NWD2Q9ULI1 1742 aa28.65■■■□□ 2.18
CCHCR1-206ENST00000448141 EDC4Q6P2E9 1401 aaKnown RBP28.64■■■□□ 2.18
CCHCR1-206ENST00000448141 FAM83GA6ND36 823 aa28.64■■■□□ 2.18
CCHCR1-206ENST00000448141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.64■■■□□ 2.18
CCHCR1-206ENST00000448141 SLIT3O75094 1523 aa28.61■■■□□ 2.17
CCHCR1-206ENST00000448141 ANKRD36BQ8N2N9 1353 aa28.61■■■□□ 2.17
CCHCR1-206ENST00000448141 KIAA0232Q92628 1395 aa28.61■■■□□ 2.17
CCHCR1-206ENST00000448141 RXRBP28702 533 aa28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 ZC3H6P61129 1189 aaKnown RBP28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 POLR3GLQ9BT43 218 aa28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 PRDM11Q9NQV5 511 aa28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 TRPC5Q9UL62 973 aaPredicted RBP28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 ATRNO75882 1429 aa28.6■■■□□ 2.17
CCHCR1-206ENST00000448141 GCP02774 474 aa28.59■■■□□ 2.17
CCHCR1-206ENST00000448141 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
CCHCR1-206ENST00000448141 NME9Q86XW9 330 aa28.58■■■□□ 2.17
CCHCR1-206ENST00000448141 USP54Q70EL1 1684 aa28.58■■■□□ 2.16
CCHCR1-206ENST00000448141 NRAPQ86VF7 1730 aa28.57■■■□□ 2.16
CCHCR1-206ENST00000448141 ZRANB1Q9UGI0 708 aa28.57■■■□□ 2.16
CCHCR1-206ENST00000448141 CHRNA2Q15822 529 aa28.56■■■□□ 2.16
CCHCR1-206ENST00000448141 RBM6P78332 1123 aaKnown RBP28.55■■■□□ 2.16
CCHCR1-206ENST00000448141 BTG4Q9NY30 223 aa28.55■■■□□ 2.16
CCHCR1-206ENST00000448141 CPDO75976 1380 aa28.54■■■□□ 2.16
CCHCR1-206ENST00000448141 USP31Q70CQ4 1352 aa28.53■■■□□ 2.16
CCHCR1-206ENST00000448141 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
CCHCR1-206ENST00000448141 SOX12O15370 315 aa28.51■■■□□ 2.15
CCHCR1-206ENST00000448141 ZBTB7CA1YPR0 619 aa28.5■■■□□ 2.15
CCHCR1-206ENST00000448141 KCNH5Q8NCM2 988 aa28.5■■■□□ 2.15
CCHCR1-206ENST00000448141 LMO7Q8WWI1 1683 aa28.5■■■□□ 2.15
CCHCR1-206ENST00000448141 NFAT5O94916 1531 aa28.49■■■□□ 2.15
CCHCR1-206ENST00000448141 CDK12Q9NYV4 1490 aaPredicted RBP28.49■■■□□ 2.15
CCHCR1-206ENST00000448141 VPS72Q15906 364 aa28.48■■■□□ 2.15
CCHCR1-206ENST00000448141 GJD4Q96KN9 370 aaPredicted RBP28.48■■■□□ 2.15
CCHCR1-206ENST00000448141 GLI3P10071 1580 aa28.48■■■□□ 2.15
CCHCR1-206ENST00000448141 KIF20BQ96Q89 1820 aa28.48■■■□□ 2.15
CCHCR1-206ENST00000448141 OVOS2A0A0J9YW53 1432 aa28.47■■■□□ 2.15
CCHCR1-206ENST00000448141 OVOS2Q6IE36 1432 aa28.47■■■□□ 2.15
CCHCR1-206ENST00000448141 CAMTA1Q9Y6Y1 1673 aa28.47■■■□□ 2.15
CCHCR1-206ENST00000448141 SOCS7O14512 581 aa28.46■■■□□ 2.15
CCHCR1-206ENST00000448141 CARD14Q9BXL6 1004 aa28.46■■■□□ 2.15
CCHCR1-206ENST00000448141 CCDC9Q9Y3X0 531 aaKnown RBP28.46■■■□□ 2.15
CCHCR1-206ENST00000448141 RGS12O14924 1447 aa28.45■■■□□ 2.15
CCHCR1-206ENST00000448141 COL18A1P39060 1754 aa28.45■■■□□ 2.14
CCHCR1-206ENST00000448141 NSD3Q9BZ95 1437 aa28.44■■■□□ 2.14
CCHCR1-206ENST00000448141 LTN1O94822 1766 aa28.43■■■□□ 2.14
CCHCR1-206ENST00000448141 STRN4Q9NRL3 753 aa28.43■■■□□ 2.14
CCHCR1-206ENST00000448141 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
CCHCR1-206ENST00000448141 AATKQ6ZMQ8 1374 aa28.42■■■□□ 2.14
CCHCR1-206ENST00000448141 ARHGEF25Q86VW2 580 aa28.42■■■□□ 2.14
CCHCR1-206ENST00000448141 RGPD5Q99666 1765 aa28.42■■■□□ 2.14
CCHCR1-206ENST00000448141 COG3Q96JB2 828 aa28.41■■■□□ 2.14
CCHCR1-206ENST00000448141 FYB1O15117 783 aa28.4■■■□□ 2.14
CCHCR1-206ENST00000448141 EVA1CP58658 441 aa28.4■■■□□ 2.14
CCHCR1-206ENST00000448141 GGNBP2Q9H3C7 697 aa28.39■■■□□ 2.14
CCHCR1-206ENST00000448141 COL5A2P05997 1499 aaPredicted RBP28.38■■■□□ 2.13
CCHCR1-206ENST00000448141 SPATA31A5Q5VU36 1347 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms