RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 SOCS7O14512 581 aa35.27■■■■□ 3.24
UFD1-204ENST00000447868 USP21Q9UK80 565 aa35.25■■■■□ 3.23
UFD1-204ENST00000447868 ATAD2Q6PL18 1390 aa35.25■■■■□ 3.23
UFD1-204ENST00000447868 USP47Q96K76 1375 aa35.24■■■■□ 3.23
UFD1-204ENST00000447868 FNBP4Q8N3X1 1017 aaPredicted RBP35.23■■■■□ 3.23
UFD1-204ENST00000447868 NUTM2GQ5VZR2 741 aa35.22■■■■□ 3.23
UFD1-204ENST00000447868 QTRT2Q9H974 415 aaKnown RBP35.22■■■■□ 3.23
UFD1-204ENST00000447868 TESK2Q96S53 571 aa35.2■■■■□ 3.23
UFD1-204ENST00000447868 RXRBP28702 533 aa35.19■■■■□ 3.22
UFD1-204ENST00000447868 USP6P35125 1406 aa35.17■■■■□ 3.22
UFD1-204ENST00000447868 ABTB2Q8N961 1025 aa35.17■■■■□ 3.22
UFD1-204ENST00000447868 CRYBG1Q9Y4K1 1723 aa35.17■■■■□ 3.22
UFD1-204ENST00000447868 TMC1Q8TDI8 760 aa35.14■■■■□ 3.22
UFD1-204ENST00000447868 BCL9LQ86UU0 1499 aa35.14■■■■□ 3.22
UFD1-204ENST00000447868 AKAP12Q02952 1782 aa35.13■■■■□ 3.21
UFD1-204ENST00000447868 TRPC5Q9UL62 973 aaPredicted RBP35.13■■■■□ 3.21
UFD1-204ENST00000447868 BRD4O60885 1362 aaPredicted RBP35.13■■■■□ 3.21
UFD1-204ENST00000447868 SLIT2O94813 1529 aa35.11■■■■□ 3.21
UFD1-204ENST00000447868 ZNF692Q9BU19 519 aaPredicted RBP35.11■■■■□ 3.21
UFD1-204ENST00000447868 PHRF1Q9P1Y6 1649 aaKnown RBP35.1■■■■□ 3.21
UFD1-204ENST00000447868 FAM83GA6ND36 823 aa35.1■■■■□ 3.21
UFD1-204ENST00000447868 RBM6P78332 1123 aaKnown RBP35.1■■■■□ 3.21
UFD1-204ENST00000447868 PLCH1Q4KWH8 1693 aa35.1■■■■□ 3.21
UFD1-204ENST00000447868 ATRNO75882 1429 aa35.09■■■■□ 3.21
UFD1-204ENST00000447868 SLC24A1O60721 1099 aa35.09■■■■□ 3.21
UFD1-204ENST00000447868 CPSF1Q10570 1443 aaKnown RBP35.08■■■■□ 3.21
UFD1-204ENST00000447868 UNC5CLQ8IV45 518 aa35.08■■■■□ 3.21
UFD1-204ENST00000447868 SSH2Q76I76 1423 aa35.07■■■■□ 3.21
UFD1-204ENST00000447868 PUS7Q96PZ0 661 aaKnown RBP35.07■■■■□ 3.2
UFD1-204ENST00000447868 KTN1Q86UP2 1357 aaKnown RBP35.07■■■■□ 3.2
UFD1-204ENST00000447868 NLRP13Q86W25 1043 aa35.06■■■■□ 3.2
UFD1-204ENST00000447868 SLC12A5Q9H2X9 1139 aa35.06■■■■□ 3.2
UFD1-204ENST00000447868 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.06■■■■□ 3.2
UFD1-204ENST00000447868 TMF1P82094 1093 aa35.05■■■■□ 3.2
UFD1-204ENST00000447868 TTC21BQ7Z4L5 1316 aa35.04■■■■□ 3.2
UFD1-204ENST00000447868 NLRP6P59044 892 aa35.03■■■■□ 3.2
UFD1-204ENST00000447868 NWD2Q9ULI1 1742 aa35.03■■■■□ 3.2
UFD1-204ENST00000447868 CD163L1Q9NR16 1453 aa35.03■■■■□ 3.2
UFD1-204ENST00000447868 COL14A1Q05707 1796 aaKnown RBP35.02■■■■□ 3.2
UFD1-204ENST00000447868 PIK3C2AO00443 1686 aa35.02■■■■□ 3.2
UFD1-204ENST00000447868 ZC3H6P61129 1189 aaKnown RBP35.02■■■■□ 3.2
UFD1-204ENST00000447868 MON2Q7Z3U7 1717 aa35.02■■■■□ 3.2
UFD1-204ENST00000447868 PRDM11Q9NQV5 511 aa35.02■■■■□ 3.2
UFD1-204ENST00000447868 CDK12Q9NYV4 1490 aaPredicted RBP35.02■■■■□ 3.2
UFD1-204ENST00000447868 USP19O94966 1318 aa35.02■■■■□ 3.2
UFD1-204ENST00000447868 KIAA0232Q92628 1395 aa35.01■■■■□ 3.2
UFD1-204ENST00000447868 NRKQ7Z2Y5 1582 aa35.01■■■■□ 3.2
UFD1-204ENST00000447868 HDGFL2Q7Z4V5 671 aaPredicted RBP35.01■■■■□ 3.2
UFD1-204ENST00000447868 BTG4Q9NY30 223 aa35■■■■□ 3.19
UFD1-204ENST00000447868 RGS12O14924 1447 aa34.99■■■■□ 3.19
UFD1-204ENST00000447868 CHRNA2Q15822 529 aa34.97■■■■□ 3.19
UFD1-204ENST00000447868 GJD4Q96KN9 370 aaPredicted RBP34.97■■■■□ 3.19
UFD1-204ENST00000447868 TERF2IPQ9NYB0 399 aa34.97■■■■□ 3.19
UFD1-204ENST00000447868 TTC21AQ8NDW8 1320 aa34.97■■■■□ 3.19
UFD1-204ENST00000447868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.96■■■■□ 3.19
UFD1-204ENST00000447868 GCP02774 474 aa34.95■■■■□ 3.19
UFD1-204ENST00000447868 CCDC9Q9Y3X0 531 aaKnown RBP34.95■■■■□ 3.19
UFD1-204ENST00000447868 A0A1W2PP64 1363 aa34.95■■■■□ 3.19
UFD1-204ENST00000447868 NRAPQ86VF7 1730 aa34.95■■■■□ 3.18
UFD1-204ENST00000447868 NINLQ9Y2I6 1382 aa34.94■■■■□ 3.18
UFD1-204ENST00000447868 VPS72Q15906 364 aa34.93■■■■□ 3.18
UFD1-204ENST00000447868 EIF4G2P78344 907 aaKnown RBP eCLIP34.92■■■■□ 3.18
UFD1-204ENST00000447868 CDCA8Q53HL2 280 aa34.91■■■■□ 3.18
UFD1-204ENST00000447868 GLI3P10071 1580 aa34.91■■■■□ 3.18
UFD1-204ENST00000447868 SLIT3O75094 1523 aa34.91■■■■□ 3.18
UFD1-204ENST00000447868 ZBTB7CA1YPR0 619 aa34.89■■■■□ 3.18
UFD1-204ENST00000447868 HSPA5P11021 654 aaKnown RBP34.89■■■■□ 3.18
UFD1-204ENST00000447868 EDC4Q6P2E9 1401 aaKnown RBP34.89■■■■□ 3.18
UFD1-204ENST00000447868 NME9Q86XW9 330 aa34.88■■■■□ 3.17
UFD1-204ENST00000447868 CPDO75976 1380 aa34.87■■■■□ 3.17
UFD1-204ENST00000447868 ZRANB1Q9UGI0 708 aa34.87■■■■□ 3.17
UFD1-204ENST00000447868 SOX12O15370 315 aa34.86■■■■□ 3.17
UFD1-204ENST00000447868 STRN4Q9NRL3 753 aa34.84■■■■□ 3.17
UFD1-204ENST00000447868 ANKRD36BQ8N2N9 1353 aa34.82■■■■□ 3.16
UFD1-204ENST00000447868 KCNH5Q8NCM2 988 aa34.81■■■■□ 3.16
UFD1-204ENST00000447868 LMO7Q8WWI1 1683 aa34.8■■■■□ 3.16
UFD1-204ENST00000447868 USP31Q70CQ4 1352 aa34.8■■■■□ 3.16
UFD1-204ENST00000447868 POLR3GLQ9BT43 218 aa34.8■■■■□ 3.16
UFD1-204ENST00000447868 CAMTA1Q9Y6Y1 1673 aa34.79■■■■□ 3.16
UFD1-204ENST00000447868 EVA1CP58658 441 aa34.79■■■■□ 3.16
UFD1-204ENST00000447868 MYOM1P52179 1685 aa34.77■■■■□ 3.16
UFD1-204ENST00000447868 SPATA31A5Q5VU36 1347 aa34.77■■■■□ 3.16
UFD1-204ENST00000447868 SPATA31A7Q8IWB4 1347 aa34.77■■■■□ 3.16
UFD1-204ENST00000447868 USP54Q70EL1 1684 aa34.76■■■■□ 3.16
UFD1-204ENST00000447868 FAM98CQ17RN3 349 aaKnown RBP34.74■■■■□ 3.15
UFD1-204ENST00000447868 SEPT12Q8IYM1 358 aa34.74■■■■□ 3.15
UFD1-204ENST00000447868 NFAT5O94916 1531 aa34.74■■■■□ 3.15
UFD1-204ENST00000447868 AATKQ6ZMQ8 1374 aa34.74■■■■□ 3.15
UFD1-204ENST00000447868 A0A0G2JS52 829 aa34.73■■■■□ 3.15
UFD1-204ENST00000447868 MYT1Q01538 1121 aa34.73■■■■□ 3.15
UFD1-204ENST00000447868 ARHGEF25Q86VW2 580 aa34.72■■■■□ 3.15
UFD1-204ENST00000447868 LARP1Q6PKG0 1096 aaKnown RBP34.71■■■■□ 3.15
UFD1-204ENST00000447868 COL18A1P39060 1754 aa34.7■■■■□ 3.15
UFD1-204ENST00000447868 BRWD3Q6RI45 1802 aa34.7■■■■□ 3.15
UFD1-204ENST00000447868 ONECUT3O60422 494 aaPredicted RBP34.7■■■■□ 3.15
UFD1-204ENST00000447868 UPF1Q92900 1129 aaKnown RBP eCLIP34.7■■■■□ 3.15
UFD1-204ENST00000447868 SPATA31A1Q5TZJ5 1347 aa34.7■■■■□ 3.15
UFD1-204ENST00000447868 OVOS2A0A0J9YW53 1432 aa34.7■■■■□ 3.15
UFD1-204ENST00000447868 OVOS2Q6IE36 1432 aa34.7■■■■□ 3.15
UFD1-204ENST00000447868 COL5A2P05997 1499 aaPredicted RBP34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms