RNA–Protein interactions for RNA: ENST00000447379.1

NEK6-210, Transcript of NIMA related kinase 6, humanhuman

TSL 5

Gene NEK6, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-210ENST00000447379 NGLY1Q96IV0 654 aa23.28■■□□□ 1.32
NEK6-210ENST00000447379 PUS7Q96PZ0 661 aaKnown RBP23.28■■□□□ 1.32
NEK6-210ENST00000447379 BRD4O60885 1362 aaPredicted RBP23.27■■□□□ 1.31
NEK6-210ENST00000447379 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
NEK6-210ENST00000447379 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
NEK6-210ENST00000447379 USP6P35125 1406 aa23.23■■□□□ 1.31
NEK6-210ENST00000447379 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
NEK6-210ENST00000447379 SSH2Q76I76 1423 aa23.22■■□□□ 1.31
NEK6-210ENST00000447379 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
NEK6-210ENST00000447379 HAP1P54257 671 aaPredicted RBP23.21■■□□□ 1.31
NEK6-210ENST00000447379 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
NEK6-210ENST00000447379 CRYBG1Q9Y4K1 1723 aa23.21■■□□□ 1.31
NEK6-210ENST00000447379 AKAP12Q02952 1782 aa23.2■■□□□ 1.3
NEK6-210ENST00000447379 USP21Q9UK80 565 aa23.2■■□□□ 1.3
NEK6-210ENST00000447379 ABTB2Q8N961 1025 aa23.19■■□□□ 1.3
NEK6-210ENST00000447379 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
NEK6-210ENST00000447379 BCL9LQ86UU0 1499 aa23.18■■□□□ 1.3
NEK6-210ENST00000447379 SOCS7O14512 581 aa23.18■■□□□ 1.3
NEK6-210ENST00000447379 SLIT2O94813 1529 aa23.18■■□□□ 1.3
NEK6-210ENST00000447379 NUTM2GQ5VZR2 741 aa23.17■■□□□ 1.3
NEK6-210ENST00000447379 SLC12A5Q9H2X9 1139 aa23.17■■□□□ 1.3
NEK6-210ENST00000447379 FAM83GA6ND36 823 aa23.16■■□□□ 1.3
NEK6-210ENST00000447379 RXRBP28702 533 aa23.16■■□□□ 1.3
NEK6-210ENST00000447379 TMF1P82094 1093 aa23.16■■□□□ 1.3
NEK6-210ENST00000447379 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
NEK6-210ENST00000447379 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
NEK6-210ENST00000447379 ATRNO75882 1429 aa23.15■■□□□ 1.3
NEK6-210ENST00000447379 KTN1Q86UP2 1357 aaKnown RBP23.14■■□□□ 1.3
NEK6-210ENST00000447379 USP19O94966 1318 aa23.14■■□□□ 1.3
NEK6-210ENST00000447379 TTC21BQ7Z4L5 1316 aa23.14■■□□□ 1.3
NEK6-210ENST00000447379 NLRP13Q86W25 1043 aa23.14■■□□□ 1.29
NEK6-210ENST00000447379 TRPC5Q9UL62 973 aaPredicted RBP23.14■■□□□ 1.29
NEK6-210ENST00000447379 PHRF1Q9P1Y6 1649 aaKnown RBP23.13■■□□□ 1.29
NEK6-210ENST00000447379 RBM6P78332 1123 aaKnown RBP23.13■■□□□ 1.29
NEK6-210ENST00000447379 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
NEK6-210ENST00000447379 MON2Q7Z3U7 1717 aa23.13■■□□□ 1.29
NEK6-210ENST00000447379 NINLQ9Y2I6 1382 aa23.13■■□□□ 1.29
NEK6-210ENST00000447379 TTC21AQ8NDW8 1320 aa23.12■■□□□ 1.29
NEK6-210ENST00000447379 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
NEK6-210ENST00000447379 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
NEK6-210ENST00000447379 NRKQ7Z2Y5 1582 aa23.11■■□□□ 1.29
NEK6-210ENST00000447379 CDCA8Q53HL2 280 aa23.11■■□□□ 1.29
NEK6-210ENST00000447379 TERF2IPQ9NYB0 399 aa23.11■■□□□ 1.29
NEK6-210ENST00000447379 PIK3C2AO00443 1686 aa23.1■■□□□ 1.29
NEK6-210ENST00000447379 PLCH1Q4KWH8 1693 aa23.1■■□□□ 1.29
NEK6-210ENST00000447379 NLRP6P59044 892 aa23.1■■□□□ 1.29
NEK6-210ENST00000447379 EIF4G2P78344 907 aaKnown RBP eCLIP23.1■■□□□ 1.29
NEK6-210ENST00000447379 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
NEK6-210ENST00000447379 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
NEK6-210ENST00000447379 COL14A1Q05707 1796 aaKnown RBP23.09■■□□□ 1.29
NEK6-210ENST00000447379 GCP02774 474 aa23.08■■□□□ 1.29
NEK6-210ENST00000447379 HSPA5P11021 654 aaKnown RBP23.08■■□□□ 1.29
NEK6-210ENST00000447379 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
NEK6-210ENST00000447379 KIAA0232Q92628 1395 aa23.08■■□□□ 1.29
NEK6-210ENST00000447379 PRDM11Q9NQV5 511 aa23.07■■□□□ 1.28
NEK6-210ENST00000447379 CPDO75976 1380 aa23.06■■□□□ 1.28
NEK6-210ENST00000447379 ZC3H6P61129 1189 aaKnown RBP23.06■■□□□ 1.28
NEK6-210ENST00000447379 GJD4Q96KN9 370 aaPredicted RBP23.06■■□□□ 1.28
NEK6-210ENST00000447379 SLIT3O75094 1523 aa23.06■■□□□ 1.28
NEK6-210ENST00000447379 EDC4Q6P2E9 1401 aaKnown RBP23.06■■□□□ 1.28
NEK6-210ENST00000447379 VPS72Q15906 364 aa23.05■■□□□ 1.28
NEK6-210ENST00000447379 BTG4Q9NY30 223 aa23.05■■□□□ 1.28
NEK6-210ENST00000447379 NRAPQ86VF7 1730 aa23.04■■□□□ 1.28
NEK6-210ENST00000447379 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
NEK6-210ENST00000447379 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
NEK6-210ENST00000447379 ANKRD36BQ8N2N9 1353 aa23.02■■□□□ 1.28
NEK6-210ENST00000447379 CHRNA2Q15822 529 aa23.02■■□□□ 1.28
NEK6-210ENST00000447379 RGS12O14924 1447 aa23.01■■□□□ 1.27
NEK6-210ENST00000447379 NME9Q86XW9 330 aa23.01■■□□□ 1.27
NEK6-210ENST00000447379 USP54Q70EL1 1684 aa23■■□□□ 1.27
NEK6-210ENST00000447379 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
NEK6-210ENST00000447379 GLI3P10071 1580 aa23■■□□□ 1.27
NEK6-210ENST00000447379 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
NEK6-210ENST00000447379 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
NEK6-210ENST00000447379 MYOM1P52179 1685 aa22.97■■□□□ 1.27
NEK6-210ENST00000447379 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
NEK6-210ENST00000447379 AATKQ6ZMQ8 1374 aa22.96■■□□□ 1.27
NEK6-210ENST00000447379 ONECUT3O60422 494 aaPredicted RBP22.95■■□□□ 1.26
NEK6-210ENST00000447379 NFAT5O94916 1531 aa22.95■■□□□ 1.26
NEK6-210ENST00000447379 ARHGEF25Q86VW2 580 aa22.95■■□□□ 1.26
NEK6-210ENST00000447379 SPATA31A5Q5VU36 1347 aa22.94■■□□□ 1.26
NEK6-210ENST00000447379 SPATA31A7Q8IWB4 1347 aa22.94■■□□□ 1.26
NEK6-210ENST00000447379 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
NEK6-210ENST00000447379 COL18A1P39060 1754 aa22.94■■□□□ 1.26
NEK6-210ENST00000447379 OVOS2A0A0J9YW53 1432 aa22.92■■□□□ 1.26
NEK6-210ENST00000447379 OVOS2Q6IE36 1432 aa22.92■■□□□ 1.26
NEK6-210ENST00000447379 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
NEK6-210ENST00000447379 CARD14Q9BXL6 1004 aa22.92■■□□□ 1.26
NEK6-210ENST00000447379 SOX12O15370 315 aa22.91■■□□□ 1.26
NEK6-210ENST00000447379 EVA1CP58658 441 aa22.91■■□□□ 1.26
NEK6-210ENST00000447379 STRN4Q9NRL3 753 aa22.91■■□□□ 1.26
NEK6-210ENST00000447379 SPATA31A1Q5TZJ5 1347 aa22.89■■□□□ 1.26
NEK6-210ENST00000447379 ZBTB7CA1YPR0 619 aa22.89■■□□□ 1.25
NEK6-210ENST00000447379 FYB1O15117 783 aa22.89■■□□□ 1.25
NEK6-210ENST00000447379 AXIN2Q9Y2T1 843 aa22.89■■□□□ 1.25
NEK6-210ENST00000447379 COL5A2P05997 1499 aaPredicted RBP22.88■■□□□ 1.25
NEK6-210ENST00000447379 POLR3GLQ9BT43 218 aa22.88■■□□□ 1.25
NEK6-210ENST00000447379 LARP1Q6PKG0 1096 aaKnown RBP22.87■■□□□ 1.25
NEK6-210ENST00000447379 SEPT12Q8IYM1 358 aa22.87■■□□□ 1.25
NEK6-210ENST00000447379 COG3Q96JB2 828 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms