RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 MYOM1P52179 1685 aa16.75■□□□□ 0.27
RFC4-208ENST00000447345 PLCH1Q4KWH8 1693 aa16.74■□□□□ 0.27
RFC4-208ENST00000447345 USP6P35125 1406 aa16.73■□□□□ 0.27
RFC4-208ENST00000447345 TMC1Q8TDI8 760 aa16.73■□□□□ 0.27
RFC4-208ENST00000447345 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
RFC4-208ENST00000447345 C8orf37Q96NL8 207 aa16.73■□□□□ 0.27
RFC4-208ENST00000447345 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
RFC4-208ENST00000447345 TMF1P82094 1093 aa16.71■□□□□ 0.27
RFC4-208ENST00000447345 NUTM2GQ5VZR2 741 aa16.71■□□□□ 0.27
RFC4-208ENST00000447345 CD163L1Q9NR16 1453 aa16.7■□□□□ 0.26
RFC4-208ENST00000447345 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
RFC4-208ENST00000447345 EIF4G2P78344 907 aaKnown RBP eCLIP16.7■□□□□ 0.26
RFC4-208ENST00000447345 RGS17Q9UGC6 210 aaPredicted RBP16.7■□□□□ 0.26
RFC4-208ENST00000447345 AFF2P51816 1311 aa16.69■□□□□ 0.26
RFC4-208ENST00000447345 KTN1Q86UP2 1357 aaKnown RBP16.68■□□□□ 0.26
RFC4-208ENST00000447345 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
RFC4-208ENST00000447345 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
RFC4-208ENST00000447345 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
RFC4-208ENST00000447345 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.67■□□□□ 0.26
RFC4-208ENST00000447345 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
RFC4-208ENST00000447345 A0A1W2PP64 1363 aa16.66■□□□□ 0.26
RFC4-208ENST00000447345 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
RFC4-208ENST00000447345 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
RFC4-208ENST00000447345 NGLY1Q96IV0 654 aa16.66■□□□□ 0.26
RFC4-208ENST00000447345 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
RFC4-208ENST00000447345 COL14A1Q05707 1796 aaKnown RBP16.66■□□□□ 0.26
RFC4-208ENST00000447345 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
RFC4-208ENST00000447345 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
RFC4-208ENST00000447345 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
RFC4-208ENST00000447345 POTEAQ6S8J7 498 aa16.64■□□□□ 0.25
RFC4-208ENST00000447345 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
RFC4-208ENST00000447345 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
RFC4-208ENST00000447345 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
RFC4-208ENST00000447345 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
RFC4-208ENST00000447345 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.25
RFC4-208ENST00000447345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
RFC4-208ENST00000447345 TTC21BQ7Z4L5 1316 aa16.63■□□□□ 0.25
RFC4-208ENST00000447345 SLIT3O75094 1523 aa16.62■□□□□ 0.25
RFC4-208ENST00000447345 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
RFC4-208ENST00000447345 ZNF772Q68DY9 489 aaPredicted RBP16.62■□□□□ 0.25
RFC4-208ENST00000447345 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
RFC4-208ENST00000447345 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
RFC4-208ENST00000447345 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
RFC4-208ENST00000447345 LTN1O94822 1766 aa16.61■□□□□ 0.25
RFC4-208ENST00000447345 USP21Q9UK80 565 aa16.61■□□□□ 0.25
RFC4-208ENST00000447345 RGPD5Q99666 1765 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 NLRP6P59044 892 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 USP19O94966 1318 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 ANKRD36BQ8N2N9 1353 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 SLIT2O94813 1529 aa16.6■□□□□ 0.25
RFC4-208ENST00000447345 KIAA0232Q92628 1395 aa16.59■□□□□ 0.25
RFC4-208ENST00000447345 SOX12O15370 315 aa16.58■□□□□ 0.24
RFC4-208ENST00000447345 ZC3H6P61129 1189 aaKnown RBP16.58■□□□□ 0.24
RFC4-208ENST00000447345 NME9Q86XW9 330 aa16.58■□□□□ 0.24
RFC4-208ENST00000447345 BCL9LQ86UU0 1499 aa16.58■□□□□ 0.24
RFC4-208ENST00000447345 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
RFC4-208ENST00000447345 ZBTB7CA1YPR0 619 aa16.57■□□□□ 0.24
RFC4-208ENST00000447345 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
RFC4-208ENST00000447345 PRDM11Q9NQV5 511 aa16.57■□□□□ 0.24
RFC4-208ENST00000447345 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
RFC4-208ENST00000447345 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
RFC4-208ENST00000447345 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
RFC4-208ENST00000447345 NFAT5O94916 1531 aa16.55■□□□□ 0.24
RFC4-208ENST00000447345 ATRNO75882 1429 aa16.55■□□□□ 0.24
RFC4-208ENST00000447345 C11orf95C9JLR9 678 aaPredicted RBP16.55■□□□□ 0.24
RFC4-208ENST00000447345 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
RFC4-208ENST00000447345 GLI3P10071 1580 aa16.55■□□□□ 0.24
RFC4-208ENST00000447345 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
RFC4-208ENST00000447345 COL18A1P39060 1754 aa16.54■□□□□ 0.24
RFC4-208ENST00000447345 ANKRD26Q9UPS8 1709 aa16.54■□□□□ 0.24
RFC4-208ENST00000447345 GCP02774 474 aa16.54■□□□□ 0.24
RFC4-208ENST00000447345 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
RFC4-208ENST00000447345 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
RFC4-208ENST00000447345 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
RFC4-208ENST00000447345 TRPC5Q9UL62 973 aaPredicted RBP16.53■□□□□ 0.24
RFC4-208ENST00000447345 USP31Q70CQ4 1352 aa16.52■□□□□ 0.24
RFC4-208ENST00000447345 RXRBP28702 533 aa16.52■□□□□ 0.24
RFC4-208ENST00000447345 UNC5CLQ8IV45 518 aa16.52■□□□□ 0.24
RFC4-208ENST00000447345 CAMTA1Q9Y6Y1 1673 aa16.52■□□□□ 0.23
RFC4-208ENST00000447345 CPDO75976 1380 aa16.51■□□□□ 0.23
RFC4-208ENST00000447345 KIF7Q2M1P5 1343 aa16.51■□□□□ 0.23
RFC4-208ENST00000447345 CCDC9Q9Y3X0 531 aaKnown RBP16.51■□□□□ 0.23
RFC4-208ENST00000447345 BRWD3Q6RI45 1802 aa16.51■□□□□ 0.23
RFC4-208ENST00000447345 RGS12O14924 1447 aa16.51■□□□□ 0.23
RFC4-208ENST00000447345 RBM6P78332 1123 aaKnown RBP16.49■□□□□ 0.23
RFC4-208ENST00000447345 KCNH5Q8NCM2 988 aa16.49■□□□□ 0.23
RFC4-208ENST00000447345 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
RFC4-208ENST00000447345 WNK3Q9BYP7 1800 aa16.48■□□□□ 0.23
RFC4-208ENST00000447345 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
RFC4-208ENST00000447345 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
RFC4-208ENST00000447345 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
RFC4-208ENST00000447345 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
RFC4-208ENST00000447345 COG3Q96JB2 828 aa16.47■□□□□ 0.23
RFC4-208ENST00000447345 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
RFC4-208ENST00000447345 VPS72Q15906 364 aa16.46■□□□□ 0.23
RFC4-208ENST00000447345 MAP2P11137 1827 aaKnown RBP16.45■□□□□ 0.22
RFC4-208ENST00000447345 PANK3Q9H999 370 aa16.45■□□□□ 0.22
RFC4-208ENST00000447345 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms