RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 MLECQ14165 292 aa12.15□□□□□ -0.46
LINC00578-204ENST00000446548 TESK2Q96S53 571 aa12.15□□□□□ -0.46
LINC00578-204ENST00000446548 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
LINC00578-204ENST00000446548 C3P01024 1663 aa12.14□□□□□ -0.47
LINC00578-204ENST00000446548 KDM5AP29375 1690 aaKnown RBP12.14□□□□□ -0.47
LINC00578-204ENST00000446548 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
LINC00578-204ENST00000446548 DISP3Q9P2K9 1392 aa12.14□□□□□ -0.47
LINC00578-204ENST00000446548 ARHGEF28Q8N1W1 1705 aaKnown RBP12.14□□□□□ -0.47
LINC00578-204ENST00000446548 MYOM1P52179 1685 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 ASXL1Q8IXJ9 1541 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 ANP32CO43423 234 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 PDE4AP27815 886 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 CFAP70Q5T0N1 1121 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
LINC00578-204ENST00000446548 A2ML1A8K2U0 1454 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
LINC00578-204ENST00000446548 UBR1Q8IWV7 1749 aa12.12□□□□□ -0.47
LINC00578-204ENST00000446548 ZMYM3Q14202 1370 aa12.12□□□□□ -0.47
LINC00578-204ENST00000446548 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
LINC00578-204ENST00000446548 ST18O60284 1047 aa12.11□□□□□ -0.47
LINC00578-204ENST00000446548 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
LINC00578-204ENST00000446548 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
LINC00578-204ENST00000446548 CRISPLD2Q9H0B8 497 aa12.1□□□□□ -0.47
LINC00578-204ENST00000446548 C14orf93Q9H972 538 aaKnown RBP12.1□□□□□ -0.47
LINC00578-204ENST00000446548 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
LINC00578-204ENST00000446548 FOXK1P85037 733 aa12.09□□□□□ -0.47
LINC00578-204ENST00000446548 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.48
LINC00578-204ENST00000446548 TNRQ92752 1358 aa12.07□□□□□ -0.48
LINC00578-204ENST00000446548 POLR3GLQ9BT43 218 aa12.07□□□□□ -0.48
LINC00578-204ENST00000446548 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
LINC00578-204ENST00000446548 ALKQ9UM73 1620 aa12.07□□□□□ -0.48
LINC00578-204ENST00000446548 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
LINC00578-204ENST00000446548 RIMS2Q9UQ26 1411 aa12.06□□□□□ -0.48
LINC00578-204ENST00000446548 DSG2Q14126 1118 aa12.06□□□□□ -0.48
LINC00578-204ENST00000446548 PLPP6Q8IY26 295 aa12.06□□□□□ -0.48
LINC00578-204ENST00000446548 LARP6Q9BRS8 491 aaKnown RBP12.06□□□□□ -0.48
LINC00578-204ENST00000446548 PRKRIP1Q9H875 184 aaPredicted RBP12.06□□□□□ -0.48
LINC00578-204ENST00000446548 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
LINC00578-204ENST00000446548 TMF1P82094 1093 aa12.05□□□□□ -0.48
LINC00578-204ENST00000446548 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
LINC00578-204ENST00000446548 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
LINC00578-204ENST00000446548 PTPRMP28827 1452 aa12.05□□□□□ -0.48
LINC00578-204ENST00000446548 RIMS1Q86UR5 1692 aaKnown RBP12.05□□□□□ -0.48
LINC00578-204ENST00000446548 ADAMTSL3P82987 1691 aa12.04□□□□□ -0.48
LINC00578-204ENST00000446548 CENPBP07199 599 aaPredicted RBP12.04□□□□□ -0.48
LINC00578-204ENST00000446548 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
LINC00578-204ENST00000446548 LCE2DQ5TA82 110 aaPredicted RBP12.04□□□□□ -0.48
LINC00578-204ENST00000446548 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
LINC00578-204ENST00000446548 DDX27Q96GQ7 796 aaKnown RBP12.04□□□□□ -0.48
LINC00578-204ENST00000446548 NLRP1Q9C000 1473 aa12.03□□□□□ -0.48
LINC00578-204ENST00000446548 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
LINC00578-204ENST00000446548 TMEM132EQ6IEE7 984 aa12.02□□□□□ -0.49
LINC00578-204ENST00000446548 TULP4Q9NRJ4 1543 aa12.01□□□□□ -0.49
LINC00578-204ENST00000446548 POTEMA6NI47 508 aa12.01□□□□□ -0.49
LINC00578-204ENST00000446548 SLC34A2O95436 690 aa12.01□□□□□ -0.49
LINC00578-204ENST00000446548 PLCB2Q00722 1185 aa12.01□□□□□ -0.49
LINC00578-204ENST00000446548 CENPJQ9HC77 1338 aaPredicted RBP12.01□□□□□ -0.49
LINC00578-204ENST00000446548 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
LINC00578-204ENST00000446548 CCDC184Q52MB2 194 aa12□□□□□ -0.49
LINC00578-204ENST00000446548 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
LINC00578-204ENST00000446548 YTHDC2Q9H6S0 1430 aaKnown RBP12□□□□□ -0.49
LINC00578-204ENST00000446548 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
LINC00578-204ENST00000446548 EMP3P54852 163 aa11.99□□□□□ -0.49
LINC00578-204ENST00000446548 MFSD10Q14728 455 aa11.99□□□□□ -0.49
LINC00578-204ENST00000446548 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
LINC00578-204ENST00000446548 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
LINC00578-204ENST00000446548 ZNF142P52746 1687 aaPredicted RBP11.98□□□□□ -0.49
LINC00578-204ENST00000446548 SLIT1O75093 1534 aa11.98□□□□□ -0.49
LINC00578-204ENST00000446548 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
LINC00578-204ENST00000446548 CEBPAP49715 358 aaPredicted RBP11.98□□□□□ -0.49
LINC00578-204ENST00000446548 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
LINC00578-204ENST00000446548 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
LINC00578-204ENST00000446548 TMEM2Q9UHN6 1383 aa11.97□□□□□ -0.49
LINC00578-204ENST00000446548 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
LINC00578-204ENST00000446548 MARVELD3Q96A59 401 aa11.97□□□□□ -0.49
LINC00578-204ENST00000446548 TBC1D12O60347 775 aa11.96□□□□□ -0.49
LINC00578-204ENST00000446548 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
LINC00578-204ENST00000446548 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
LINC00578-204ENST00000446548 PANK3Q9H999 370 aa11.96□□□□□ -0.49
LINC00578-204ENST00000446548 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.5
LINC00578-204ENST00000446548 ARSIQ5FYB1 569 aa11.95□□□□□ -0.5
LINC00578-204ENST00000446548 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00578-204ENST00000446548 CPS1P31327 1500 aa11.95□□□□□ -0.5
LINC00578-204ENST00000446548 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
LINC00578-204ENST00000446548 USP32Q8NFA0 1604 aa11.94□□□□□ -0.5
LINC00578-204ENST00000446548 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
LINC00578-204ENST00000446548 WDR70Q9NW82 654 aa11.94□□□□□ -0.5
LINC00578-204ENST00000446548 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
LINC00578-204ENST00000446548 ADAMTS13Q76LX8 1427 aa11.94□□□□□ -0.5
LINC00578-204ENST00000446548 RALBP1Q15311 655 aa11.93□□□□□ -0.5
LINC00578-204ENST00000446548 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
LINC00578-204ENST00000446548 MED14O60244 1454 aa11.93□□□□□ -0.5
LINC00578-204ENST00000446548 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
LINC00578-204ENST00000446548 MRS2Q9HD23 443 aa11.92□□□□□ -0.5
LINC00578-204ENST00000446548 STK26Q9P289 416 aa11.92□□□□□ -0.5
LINC00578-204ENST00000446548 TECPR2O15040 1411 aa11.92□□□□□ -0.5
LINC00578-204ENST00000446548 METP08581 1390 aa11.92□□□□□ -0.5
LINC00578-204ENST00000446548 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
LINC00578-204ENST00000446548 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
LINC00578-204ENST00000446548 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms