RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 PKNOX2Q96KN3 472 aa20.81■□□□□ 0.92
BRF1-206ENST00000446501 WDR63Q8IWG1 891 aa20.79■□□□□ 0.92
BRF1-206ENST00000446501 NSD2O96028 1365 aa20.78■□□□□ 0.92
BRF1-206ENST00000446501 NAP1L5Q96NT1 182 aaPredicted RBP20.78■□□□□ 0.92
BRF1-206ENST00000446501 CD163L1Q9NR16 1453 aa20.78■□□□□ 0.92
BRF1-206ENST00000446501 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
BRF1-206ENST00000446501 PDE3AQ14432 1141 aa20.78■□□□□ 0.92
BRF1-206ENST00000446501 RIMBP3CA6NJZ7 1639 aa20.77■□□□□ 0.92
BRF1-206ENST00000446501 RIMBP3BA6NNM3 1639 aa20.77■□□□□ 0.92
BRF1-206ENST00000446501 RIMBP3Q9UFD9 1639 aa20.77■□□□□ 0.92
BRF1-206ENST00000446501 ALKQ9UM73 1620 aa20.77■□□□□ 0.92
BRF1-206ENST00000446501 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
BRF1-206ENST00000446501 NCKAP5LQ9HCH0 1330 aa20.77■□□□□ 0.92
BRF1-206ENST00000446501 USP32Q8NFA0 1604 aa20.76■□□□□ 0.91
BRF1-206ENST00000446501 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
BRF1-206ENST00000446501 PLEKHF1Q96S99 279 aa20.75■□□□□ 0.91
BRF1-206ENST00000446501 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
BRF1-206ENST00000446501 TXNDC2Q86VQ3 553 aa20.75■□□□□ 0.91
BRF1-206ENST00000446501 CCDC27Q2M243 656 aa20.74■□□□□ 0.91
BRF1-206ENST00000446501 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
BRF1-206ENST00000446501 SEC24BO95487 1268 aa20.73■□□□□ 0.91
BRF1-206ENST00000446501 TRIM35Q9UPQ4 493 aa20.73■□□□□ 0.91
BRF1-206ENST00000446501 MAPK8IP3Q9UPT6 1336 aa20.73■□□□□ 0.91
BRF1-206ENST00000446501 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
BRF1-206ENST00000446501 GZF1Q9H116 711 aaPredicted RBP20.73■□□□□ 0.91
BRF1-206ENST00000446501 ZRANB1Q9UGI0 708 aa20.73■□□□□ 0.91
BRF1-206ENST00000446501 PCDHB15Q9Y5E8 787 aa20.73■□□□□ 0.91
BRF1-206ENST00000446501 MYH16Q9H6N6 1097 aa20.72■□□□□ 0.91
BRF1-206ENST00000446501 A2ML1A8K2U0 1454 aa20.72■□□□□ 0.91
BRF1-206ENST00000446501 RIMS2Q9UQ26 1411 aa20.72■□□□□ 0.91
BRF1-206ENST00000446501 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
BRF1-206ENST00000446501 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 SPRYD3Q8NCJ5 442 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 NINLQ9Y2I6 1382 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 NLRP1Q9C000 1473 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 ARHGEF40Q8TER5 1519 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 CLTCQ00610 1675 aaKnown RBP20.71■□□□□ 0.91
BRF1-206ENST00000446501 RIPK4P57078 832 aa20.71■□□□□ 0.91
BRF1-206ENST00000446501 L1TD1Q5T7N2 865 aaKnown RBP20.71■□□□□ 0.91
BRF1-206ENST00000446501 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
BRF1-206ENST00000446501 METP08581 1390 aa20.69■□□□□ 0.9
BRF1-206ENST00000446501 BECN1Q14457 450 aa20.69■□□□□ 0.9
BRF1-206ENST00000446501 HMOX1P09601 288 aa20.69■□□□□ 0.9
BRF1-206ENST00000446501 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 USP19O94966 1318 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 NME9Q86XW9 330 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 PNNQ9H307 717 aaKnown RBP20.68■□□□□ 0.9
BRF1-206ENST00000446501 SMC4Q9NTJ3 1288 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 POLKQ9UBT6 870 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
BRF1-206ENST00000446501 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
BRF1-206ENST00000446501 NUTM2FA1L443 756 aa20.66■□□□□ 0.9
BRF1-206ENST00000446501 THUMPD2Q9BTF0 503 aaKnown RBP20.66■□□□□ 0.9
BRF1-206ENST00000446501 PANK2Q9BZ23 570 aa20.66■□□□□ 0.9
BRF1-206ENST00000446501 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
BRF1-206ENST00000446501 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
BRF1-206ENST00000446501 FTSJ3Q8IY81 847 aaKnown RBP20.64■□□□□ 0.9
BRF1-206ENST00000446501 ZMYM3Q14202 1370 aa20.64■□□□□ 0.9
BRF1-206ENST00000446501 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.892e-6■■□□□ 12.3
BRF1-206ENST00000446501 PHACTR3Q96KR7 559 aa20.64■□□□□ 0.89
BRF1-206ENST00000446501 ZMYND15Q9H091 742 aa20.64■□□□□ 0.89
BRF1-206ENST00000446501 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
BRF1-206ENST00000446501 GOLGA6L3A6NEY3 463 aa20.63■□□□□ 0.89
BRF1-206ENST00000446501 HSP90AA2PQ14568 343 aaPredicted RBP20.63■□□□□ 0.89
BRF1-206ENST00000446501 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
BRF1-206ENST00000446501 RRS1Q15050 365 aaKnown RBP20.62■□□□□ 0.89
BRF1-206ENST00000446501 ZKSCAN2Q63HK3 967 aa20.62■□□□□ 0.89
BRF1-206ENST00000446501 TRIM27P14373 513 aa20.61■□□□□ 0.89
BRF1-206ENST00000446501 ADGRB2O60241 1585 aa20.61■□□□□ 0.89
BRF1-206ENST00000446501 DZIP1LQ8IYY4 767 aaKnown RBP20.61■□□□□ 0.89
BRF1-206ENST00000446501 AGLP35573 1532 aa20.6■□□□□ 0.89
BRF1-206ENST00000446501 HSP90AA1P07900 732 aaKnown RBP20.6■□□□□ 0.89
BRF1-206ENST00000446501 MVPQ14764 893 aaKnown RBP20.6■□□□□ 0.89
BRF1-206ENST00000446501 NUDT16Q96DE0 195 aaKnown RBP20.6■□□□□ 0.89
BRF1-206ENST00000446501 NOB1Q9ULX3 412 aaKnown RBP20.6■□□□□ 0.89
BRF1-206ENST00000446501 SPATA31D1Q6ZQQ2 1576 aa20.6■□□□□ 0.89
BRF1-206ENST00000446501 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
BRF1-206ENST00000446501 PPIP5K1Q6PFW1 1433 aa20.59■□□□□ 0.89
BRF1-206ENST00000446501 ITPRIPQ8IWB1 547 aa20.59■□□□□ 0.89
BRF1-206ENST00000446501 PDZRN3Q9UPQ7 1066 aa20.59■□□□□ 0.89
BRF1-206ENST00000446501 CEBPAP49715 358 aaPredicted RBP20.58■□□□□ 0.89
BRF1-206ENST00000446501 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
BRF1-206ENST00000446501 PMFBP1Q8TBY8 1022 aa20.57■□□□□ 0.88
BRF1-206ENST00000446501 MED14O60244 1454 aa20.57■□□□□ 0.88
BRF1-206ENST00000446501 FCHSD2O94868 740 aa20.56■□□□□ 0.88
BRF1-206ENST00000446501 ANTXR1Q9H6X2 564 aa20.56■□□□□ 0.88
BRF1-206ENST00000446501 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
BRF1-206ENST00000446501 SOX12O15370 315 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 ATF7IPQ6VMQ6 1270 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
BRF1-206ENST00000446501 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 NCBP3Q53F19 620 aaKnown RBP20.54■□□□□ 0.88
BRF1-206ENST00000446501 TMEM57Q8N5G2 664 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 CCDC61Q9Y6R9 512 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 REREQ9P2R6 1566 aa20.54■□□□□ 0.88
BRF1-206ENST00000446501 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
BRF1-206ENST00000446501 RWDD1Q9H446 243 aaPredicted RBP20.53■□□□□ 0.88
BRF1-206ENST00000446501 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
BRF1-206ENST00000446501 IL13P35225 146 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms