RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 SPATA31A5Q5VU36 1347 aa22.06■■□□□ 1.12
UBE2F-216ENST00000445676 SPATA31A7Q8IWB4 1347 aa22.06■■□□□ 1.12
UBE2F-216ENST00000445676 TULP4Q9NRJ4 1543 aa22.05■■□□□ 1.12
UBE2F-216ENST00000445676 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
UBE2F-216ENST00000445676 R3HDM1Q15032 1099 aaKnown RBP22.03■■□□□ 1.12
UBE2F-216ENST00000445676 POGKQ9P215 609 aa22.03■■□□□ 1.12
UBE2F-216ENST00000445676 ACIN1Q9UKV3 1341 aaKnown RBP22.03■■□□□ 1.12
UBE2F-216ENST00000445676 GPRASP1Q5JY77 1395 aa22.02■■□□□ 1.12
UBE2F-216ENST00000445676 PHRF1Q9P1Y6 1649 aaKnown RBP22.02■■□□□ 1.11
UBE2F-216ENST00000445676 HIRIP3Q9BW71 556 aaPredicted RBP22.01■■□□□ 1.11
UBE2F-216ENST00000445676 ITSN1Q15811 1721 aa22■■□□□ 1.11
UBE2F-216ENST00000445676 RREB1Q92766 1687 aa22■■□□□ 1.11
UBE2F-216ENST00000445676 EZH2Q15910 746 aaKnown RBP21.98■■□□□ 1.11
UBE2F-216ENST00000445676 MINK1Q8N4C8 1332 aaPredicted RBP21.98■■□□□ 1.11
UBE2F-216ENST00000445676 EIF3AQ14152 1382 aaKnown RBP21.98■■□□□ 1.11
UBE2F-216ENST00000445676 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
UBE2F-216ENST00000445676 PRDM11Q9NQV5 511 aa21.96■■□□□ 1.11
UBE2F-216ENST00000445676 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
UBE2F-216ENST00000445676 ARHGEF28Q8N1W1 1705 aaKnown RBP21.96■■□□□ 1.11
UBE2F-216ENST00000445676 SPATA31A1Q5TZJ5 1347 aa21.95■■□□□ 1.1
UBE2F-216ENST00000445676 CAMKK2Q96RR4 588 aa21.94■■□□□ 1.1
UBE2F-216ENST00000445676 KIAA0232Q92628 1395 aa21.94■■□□□ 1.1
UBE2F-216ENST00000445676 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
UBE2F-216ENST00000445676 TRIM37O94972 964 aa21.93■■□□□ 1.1
UBE2F-216ENST00000445676 ATP7BP35670 1465 aa21.93■■□□□ 1.1
UBE2F-216ENST00000445676 PAK3O75914 559 aaPredicted RBP21.92■■□□□ 1.1
UBE2F-216ENST00000445676 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
UBE2F-216ENST00000445676 CHRNA2Q15822 529 aa21.91■■□□□ 1.1
UBE2F-216ENST00000445676 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
UBE2F-216ENST00000445676 PARD3Q8TEW0 1356 aa21.9■■□□□ 1.1
UBE2F-216ENST00000445676 FAM196AQ6ZSG2 479 aa21.9■■□□□ 1.1
UBE2F-216ENST00000445676 NRKQ7Z2Y5 1582 aa21.89■■□□□ 1.09
UBE2F-216ENST00000445676 STRN4Q9NRL3 753 aa21.88■■□□□ 1.09
UBE2F-216ENST00000445676 LMO7Q8WWI1 1683 aa21.87■■□□□ 1.09
UBE2F-216ENST00000445676 SSH2Q76I76 1423 aa21.87■■□□□ 1.09
UBE2F-216ENST00000445676 APBA3O96018 575 aa21.86■■□□□ 1.09
UBE2F-216ENST00000445676 ZC3H6P61129 1189 aaKnown RBP21.85■■□□□ 1.09
UBE2F-216ENST00000445676 CAMTA1Q9Y6Y1 1673 aa21.85■■□□□ 1.09
UBE2F-216ENST00000445676 USP35Q9P2H5 1018 aa21.84■■□□□ 1.09
UBE2F-216ENST00000445676 PARP4Q9UKK3 1724 aaKnown RBP21.83■■□□□ 1.09
UBE2F-216ENST00000445676 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.09
UBE2F-216ENST00000445676 BARGINQ6ZT62 677 aa21.82■■□□□ 1.08
UBE2F-216ENST00000445676 NUDT16Q96DE0 195 aaKnown RBP21.82■■□□□ 1.08
UBE2F-216ENST00000445676 KDM2AQ9Y2K7 1162 aa21.82■■□□□ 1.08
UBE2F-216ENST00000445676 SBF2Q86WG5 1849 aa21.81■■□□□ 1.08
UBE2F-216ENST00000445676 POLR3AO14802 1390 aaPredicted RBP21.81■■□□□ 1.08
UBE2F-216ENST00000445676 RAB3GAP2Q9H2M9 1393 aa21.79■■□□□ 1.08
UBE2F-216ENST00000445676 PDE3BQ13370 1112 aa21.79■■□□□ 1.08
UBE2F-216ENST00000445676 LARP1Q6PKG0 1096 aaKnown RBP21.79■■□□□ 1.08
UBE2F-216ENST00000445676 DCAF11Q8TEB1 546 aa21.79■■□□□ 1.08
UBE2F-216ENST00000445676 RGPD3A6NKT7 1758 aaPredicted RBP21.79■■□□□ 1.08
UBE2F-216ENST00000445676 RGPD4Q7Z3J3 1758 aa21.79■■□□□ 1.08
UBE2F-216ENST00000445676 PEAK1Q9H792 1746 aa21.78■■□□□ 1.08
UBE2F-216ENST00000445676 YY1P25490 414 aa21.78■■□□□ 1.08
UBE2F-216ENST00000445676 ACEP12821 1306 aa21.77■■□□□ 1.07
UBE2F-216ENST00000445676 CPDO75976 1380 aa21.76■■□□□ 1.07
UBE2F-216ENST00000445676 EVA1CP58658 441 aa21.76■■□□□ 1.07
UBE2F-216ENST00000445676 TCP11L2Q8N4U5 519 aa21.76■■□□□ 1.07
UBE2F-216ENST00000445676 USP19O94966 1318 aa21.76■■□□□ 1.07
UBE2F-216ENST00000445676 NBPF8Q3BBV2 869 aa21.75■■□□□ 1.07
UBE2F-216ENST00000445676 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
UBE2F-216ENST00000445676 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
UBE2F-216ENST00000445676 CDK19Q9BWU1 502 aa21.74■■□□□ 1.07
UBE2F-216ENST00000445676 COL5A2P05997 1499 aaPredicted RBP21.74■■□□□ 1.07
UBE2F-216ENST00000445676 CASZ1Q86V15 1759 aa21.74■■□□□ 1.07
UBE2F-216ENST00000445676 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
UBE2F-216ENST00000445676 KIAA1210Q9ULL0 1709 aa21.72■■□□□ 1.07
UBE2F-216ENST00000445676 ABTB2Q8N961 1025 aa21.71■■□□□ 1.07
UBE2F-216ENST00000445676 STAC3Q96MF2 364 aa21.71■■□□□ 1.07
UBE2F-216ENST00000445676 SPON1Q9HCB6 807 aa21.71■■□□□ 1.07
UBE2F-216ENST00000445676 THRAP3Q9Y2W1 955 aaKnown RBP21.71■■□□□ 1.07
UBE2F-216ENST00000445676 CCDC61Q9Y6R9 512 aa21.71■■□□□ 1.07
UBE2F-216ENST00000445676 NINLQ9Y2I6 1382 aa21.71■■□□□ 1.07
UBE2F-216ENST00000445676 PLEKHG3A1L390 1219 aa21.7■■□□□ 1.06
UBE2F-216ENST00000445676 KCNQ2O43526 872 aa21.7■■□□□ 1.06
UBE2F-216ENST00000445676 PPP1R1BQ9UD71 204 aaPredicted RBP21.7■■□□□ 1.06
UBE2F-216ENST00000445676 OVOS2A0A0G2JMS6 1433 aa21.69■■□□□ 1.06
UBE2F-216ENST00000445676 OVOS2A0A0J9YW53 1432 aa21.69■■□□□ 1.06
UBE2F-216ENST00000445676 OVOS2Q6IE36 1432 aa21.69■■□□□ 1.06
UBE2F-216ENST00000445676 AKAP12Q02952 1782 aa21.68■■□□□ 1.06
UBE2F-216ENST00000445676 CRB1P82279 1406 aa21.67■■□□□ 1.06
UBE2F-216ENST00000445676 COL18A1P39060 1754 aa21.66■■□□□ 1.06
UBE2F-216ENST00000445676 GCP02774 474 aa21.66■■□□□ 1.06
UBE2F-216ENST00000445676 ANO8Q9HCE9 1232 aaPredicted RBP21.66■■□□□ 1.06
UBE2F-216ENST00000445676 MYOM1P52179 1685 aa21.65■■□□□ 1.06
UBE2F-216ENST00000445676 SLIT3O75094 1523 aa21.65■■□□□ 1.06
UBE2F-216ENST00000445676 PPIP5K1Q6PFW1 1433 aa21.64■■□□□ 1.06
UBE2F-216ENST00000445676 RGPD5Q99666 1765 aa21.64■■□□□ 1.05
UBE2F-216ENST00000445676 C11orf95C9JLR9 678 aaPredicted RBP21.63■■□□□ 1.05
UBE2F-216ENST00000445676 NLRP13Q86W25 1043 aa21.63■■□□□ 1.05
UBE2F-216ENST00000445676 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
UBE2F-216ENST00000445676 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
UBE2F-216ENST00000445676 UTRNP46939 3433 aa21.62■■□□□ 1.05
UBE2F-216ENST00000445676 PLSCR1O15162 318 aa21.61■■□□□ 1.05
UBE2F-216ENST00000445676 PTF1AQ7RTS3 328 aa21.61■■□□□ 1.05
UBE2F-216ENST00000445676 AATKQ6ZMQ8 1374 aa21.6■■□□□ 1.05
UBE2F-216ENST00000445676 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
UBE2F-216ENST00000445676 USP6P35125 1406 aa21.59■■□□□ 1.05
UBE2F-216ENST00000445676 PDGFDQ9GZP0 370 aaPredicted RBP21.59■■□□□ 1.05
UBE2F-216ENST00000445676 ZBTB7CA1YPR0 619 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms