RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 TTC21AQ8NDW8 1320 aa12.91□□□□□ -0.34
NPHP1-207ENST00000445609 BRD4O60885 1362 aaPredicted RBP12.9□□□□□ -0.34
NPHP1-207ENST00000445609 AKAP12Q02952 1782 aa12.9□□□□□ -0.34
NPHP1-207ENST00000445609 NME9Q86XW9 330 aa12.9□□□□□ -0.34
NPHP1-207ENST00000445609 MON2Q7Z3U7 1717 aa12.89□□□□□ -0.35
NPHP1-207ENST00000445609 BRINP3Q76B58 766 aa12.89□□□□□ -0.35
NPHP1-207ENST00000445609 NLRP13Q86W25 1043 aa12.89□□□□□ -0.35
NPHP1-207ENST00000445609 PAK3O75914 559 aaPredicted RBP12.88□□□□□ -0.35
NPHP1-207ENST00000445609 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
NPHP1-207ENST00000445609 TNNT2P45379 298 aaPredicted RBP12.88□□□□□ -0.35
NPHP1-207ENST00000445609 KRT28Q7Z3Y7 464 aa12.88□□□□□ -0.35
NPHP1-207ENST00000445609 COG3Q96JB2 828 aa12.88□□□□□ -0.35
NPHP1-207ENST00000445609 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
NPHP1-207ENST00000445609 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
NPHP1-207ENST00000445609 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
NPHP1-207ENST00000445609 ZRANB1Q9UGI0 708 aa12.87□□□□□ -0.35
NPHP1-207ENST00000445609 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
NPHP1-207ENST00000445609 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
NPHP1-207ENST00000445609 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
NPHP1-207ENST00000445609 ABTB2Q8N961 1025 aa12.86□□□□□ -0.35
NPHP1-207ENST00000445609 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
NPHP1-207ENST00000445609 NLRP6P59044 892 aa12.85□□□□□ -0.35
NPHP1-207ENST00000445609 DDX17Q92841 729 aaKnown RBP12.85□□□□□ -0.35
NPHP1-207ENST00000445609 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
NPHP1-207ENST00000445609 TOM1O60784 492 aa12.84□□□□□ -0.35
NPHP1-207ENST00000445609 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.36
NPHP1-207ENST00000445609 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
NPHP1-207ENST00000445609 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
NPHP1-207ENST00000445609 NUTM2GQ5VZR2 741 aa12.83□□□□□ -0.36
NPHP1-207ENST00000445609 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
NPHP1-207ENST00000445609 MTHFSP49914 203 aa12.82□□□□□ -0.36
NPHP1-207ENST00000445609 LMOD2Q6P5Q4 547 aa12.82□□□□□ -0.36
NPHP1-207ENST00000445609 CERKQ8TCT0 537 aa12.82□□□□□ -0.36
NPHP1-207ENST00000445609 IQSEC2Q5JU85 1478 aa12.81□□□□□ -0.36
NPHP1-207ENST00000445609 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
NPHP1-207ENST00000445609 ANKRD26Q9UPS8 1709 aa12.81□□□□□ -0.36
NPHP1-207ENST00000445609 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
NPHP1-207ENST00000445609 PXDNQ92626 1479 aa12.81□□□□□ -0.36
NPHP1-207ENST00000445609 FBLN1P23142 703 aa12.8□□□□□ -0.36
NPHP1-207ENST00000445609 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
NPHP1-207ENST00000445609 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
NPHP1-207ENST00000445609 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
NPHP1-207ENST00000445609 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
NPHP1-207ENST00000445609 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
NPHP1-207ENST00000445609 CFAP53Q96M91 514 aa12.79□□□□□ -0.36
NPHP1-207ENST00000445609 TNS3Q68CZ2 1445 aa12.78□□□□□ -0.36
NPHP1-207ENST00000445609 SOX12O15370 315 aa12.78□□□□□ -0.36
NPHP1-207ENST00000445609 FAM9BQ8IZU0 186 aa12.78□□□□□ -0.36
NPHP1-207ENST00000445609 TRPM3Q9HCF6 1732 aaPredicted RBP12.78□□□□□ -0.36
NPHP1-207ENST00000445609 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
NPHP1-207ENST00000445609 PIP4K2BP78356 416 aa12.78□□□□□ -0.36
NPHP1-207ENST00000445609 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
NPHP1-207ENST00000445609 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
NPHP1-207ENST00000445609 ARHGEF10O15013 1369 aa12.77□□□□□ -0.36
NPHP1-207ENST00000445609 EMILIN1Q9Y6C2 1016 aa12.77□□□□□ -0.37
NPHP1-207ENST00000445609 USP19O94966 1318 aa12.76□□□□□ -0.37
NPHP1-207ENST00000445609 ROBO1Q9Y6N7 1651 aa12.76□□□□□ -0.37
NPHP1-207ENST00000445609 GCP02774 474 aa12.76□□□□□ -0.37
NPHP1-207ENST00000445609 PNPLA6Q8IY17 1366 aa12.75□□□□□ -0.37
NPHP1-207ENST00000445609 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
NPHP1-207ENST00000445609 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
NPHP1-207ENST00000445609 INSRP06213 1382 aa12.75□□□□□ -0.37
NPHP1-207ENST00000445609 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
NPHP1-207ENST00000445609 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
NPHP1-207ENST00000445609 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
NPHP1-207ENST00000445609 LRRC59Q96AG4 307 aaKnown RBP12.75□□□□□ -0.37
NPHP1-207ENST00000445609 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
NPHP1-207ENST00000445609 NHSL1Q5SYE7 1610 aa12.74□□□□□ -0.37
NPHP1-207ENST00000445609 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
NPHP1-207ENST00000445609 AMPHP49418 695 aa12.73□□□□□ -0.37
NPHP1-207ENST00000445609 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
NPHP1-207ENST00000445609 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
NPHP1-207ENST00000445609 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
NPHP1-207ENST00000445609 SLIT3O75094 1523 aa12.72□□□□□ -0.37
NPHP1-207ENST00000445609 ADAMTS8Q9UP79 889 aa12.72□□□□□ -0.37
NPHP1-207ENST00000445609 MARF1Q9Y4F3 1742 aaKnown RBP12.72□□□□□ -0.37
NPHP1-207ENST00000445609 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
NPHP1-207ENST00000445609 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
NPHP1-207ENST00000445609 CABLES1Q8TDN4 633 aa12.71□□□□□ -0.37
NPHP1-207ENST00000445609 ARHGEF25Q86VW2 580 aa12.71□□□□□ -0.37
NPHP1-207ENST00000445609 FLT4P35916 1363 aa12.71□□□□□ -0.38
NPHP1-207ENST00000445609 NFAT5O94916 1531 aa12.71□□□□□ -0.38
NPHP1-207ENST00000445609 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
NPHP1-207ENST00000445609 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
NPHP1-207ENST00000445609 COL3A1P02461 1466 aaPredicted RBP12.7□□□□□ -0.38
NPHP1-207ENST00000445609 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
NPHP1-207ENST00000445609 HOXC9P31274 260 aa12.69□□□□□ -0.38
NPHP1-207ENST00000445609 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
NPHP1-207ENST00000445609 IL13P35225 146 aa12.69□□□□□ -0.38
NPHP1-207ENST00000445609 ZC3H6P61129 1189 aaKnown RBP12.69□□□□□ -0.38
NPHP1-207ENST00000445609 IP6K1Q92551 441 aa12.69□□□□□ -0.38
NPHP1-207ENST00000445609 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
NPHP1-207ENST00000445609 ZBTB7CA1YPR0 619 aa12.68□□□□□ -0.38
NPHP1-207ENST00000445609 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
NPHP1-207ENST00000445609 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
NPHP1-207ENST00000445609 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
NPHP1-207ENST00000445609 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
NPHP1-207ENST00000445609 HNRNPUQ00839 825 aaKnown RBP eCLIP12.66□□□□□ -0.38
NPHP1-207ENST00000445609 PEAK1Q9H792 1746 aa12.66□□□□□ -0.38
NPHP1-207ENST00000445609 CPDO75976 1380 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms