RNA–Protein interactions for RNA: ENST00000445180.2

LINC01648-201, Transcript of long intergenic non-protein coding RNA 1648, humanhuman

TSL 1 (best) BASIC

Gene LINC01648, Length 1,519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01648-201ENST00000445180 LMTK3Q96Q04 1460 aa19.55■□□□□ 0.72
LINC01648-201ENST00000445180 ZRANB1Q9UGI0 708 aa19.55■□□□□ 0.72
LINC01648-201ENST00000445180 PDE3BQ13370 1112 aa19.54■□□□□ 0.72
LINC01648-201ENST00000445180 TTC21AQ8NDW8 1320 aa19.53■□□□□ 0.72
LINC01648-201ENST00000445180 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
LINC01648-201ENST00000445180 POLKQ9UBT6 870 aa19.53■□□□□ 0.72
LINC01648-201ENST00000445180 AATKQ6ZMQ8 1374 aa19.53■□□□□ 0.72
LINC01648-201ENST00000445180 PNPLA6Q8IY17 1366 aa19.53■□□□□ 0.72
LINC01648-201ENST00000445180 NALCNQ8IZF0 1738 aa19.52■□□□□ 0.72
LINC01648-201ENST00000445180 SMG6Q86US8 1419 aaKnown RBP19.52■□□□□ 0.71
LINC01648-201ENST00000445180 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
LINC01648-201ENST00000445180 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
LINC01648-201ENST00000445180 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
LINC01648-201ENST00000445180 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
LINC01648-201ENST00000445180 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
LINC01648-201ENST00000445180 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
LINC01648-201ENST00000445180 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
LINC01648-201ENST00000445180 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
LINC01648-201ENST00000445180 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
LINC01648-201ENST00000445180 SHPRHQ149N8 1683 aa19.48■□□□□ 0.71
LINC01648-201ENST00000445180 FBLN1P23142 703 aa19.48■□□□□ 0.71
LINC01648-201ENST00000445180 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
LINC01648-201ENST00000445180 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
LINC01648-201ENST00000445180 USP31Q70CQ4 1352 aa19.47■□□□□ 0.71
LINC01648-201ENST00000445180 APAF1O14727 1248 aa19.46■□□□□ 0.71
LINC01648-201ENST00000445180 DIAPH1O60610 1272 aaKnown RBP19.46■□□□□ 0.71
LINC01648-201ENST00000445180 RUNDC1Q96C34 613 aa19.46■□□□□ 0.71
LINC01648-201ENST00000445180 OVOS2A0A0J9YW53 1432 aa19.46■□□□□ 0.71
LINC01648-201ENST00000445180 OVOS2Q6IE36 1432 aa19.46■□□□□ 0.71
LINC01648-201ENST00000445180 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
LINC01648-201ENST00000445180 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
LINC01648-201ENST00000445180 ESCO1Q5FWF5 840 aa19.45■□□□□ 0.7
LINC01648-201ENST00000445180 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
LINC01648-201ENST00000445180 EMILIN1Q9Y6C2 1016 aa19.44■□□□□ 0.7
LINC01648-201ENST00000445180 ZNF521Q96K83 1311 aa19.44■□□□□ 0.7
LINC01648-201ENST00000445180 TMEM94Q12767 1356 aa19.44■□□□□ 0.7
LINC01648-201ENST00000445180 STRCQ7RTU9 1775 aa19.43■□□□□ 0.7
LINC01648-201ENST00000445180 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
LINC01648-201ENST00000445180 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
LINC01648-201ENST00000445180 MAP2P11137 1827 aaKnown RBP19.42■□□□□ 0.7
LINC01648-201ENST00000445180 STRCP1A6NGW2 1772 aa19.41■□□□□ 0.7
LINC01648-201ENST00000445180 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
LINC01648-201ENST00000445180 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
LINC01648-201ENST00000445180 CDCA7LQ96GN5 454 aa19.41■□□□□ 0.7
LINC01648-201ENST00000445180 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
LINC01648-201ENST00000445180 CDK12Q9NYV4 1490 aaPredicted RBP19.4■□□□□ 0.7
LINC01648-201ENST00000445180 DCCP43146 1447 aa19.4■□□□□ 0.7
LINC01648-201ENST00000445180 ATF3P18847 181 aa19.4■□□□□ 0.7
LINC01648-201ENST00000445180 PSME1Q06323 249 aa19.4■□□□□ 0.7
LINC01648-201ENST00000445180 TCP11L2Q8N4U5 519 aa19.4■□□□□ 0.7
LINC01648-201ENST00000445180 NEFLP07196 543 aa19.39■□□□□ 0.69
LINC01648-201ENST00000445180 IL13P35225 146 aa19.39■□□□□ 0.69
LINC01648-201ENST00000445180 NLRP6P59044 892 aa19.39■□□□□ 0.69
LINC01648-201ENST00000445180 PNNQ9H307 717 aaKnown RBP19.39■□□□□ 0.69
LINC01648-201ENST00000445180 C1orf167Q5SNV9 1468 aa19.38■□□□□ 0.69
LINC01648-201ENST00000445180 FCHSD2O94868 740 aa19.38■□□□□ 0.69
LINC01648-201ENST00000445180 GOLGA2Q08379 1002 aa19.38■□□□□ 0.69
LINC01648-201ENST00000445180 PLEKHF1Q96S99 279 aa19.38■□□□□ 0.69
LINC01648-201ENST00000445180 ABTB2Q8N961 1025 aa19.37■□□□□ 0.69
LINC01648-201ENST00000445180 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
LINC01648-201ENST00000445180 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
LINC01648-201ENST00000445180 DMRT2Q9Y5R5 561 aa19.36■□□□□ 0.69
LINC01648-201ENST00000445180 FKBP8Q14318 412 aa19.35■□□□□ 0.69
LINC01648-201ENST00000445180 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
LINC01648-201ENST00000445180 FOXO3O43524 673 aa19.35■□□□□ 0.69
LINC01648-201ENST00000445180 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
LINC01648-201ENST00000445180 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
LINC01648-201ENST00000445180 PIK3C2AO00443 1686 aa19.34■□□□□ 0.69
LINC01648-201ENST00000445180 IQSEC2Q5JU85 1478 aa19.34■□□□□ 0.69
LINC01648-201ENST00000445180 WWC1Q8IX03 1113 aa19.34■□□□□ 0.69
LINC01648-201ENST00000445180 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
LINC01648-201ENST00000445180 MST1RQ04912 1400 aa19.34■□□□□ 0.69
LINC01648-201ENST00000445180 RNF123Q5XPI4 1314 aa19.33■□□□□ 0.69
LINC01648-201ENST00000445180 MSH6P52701 1360 aa19.33■□□□□ 0.68
LINC01648-201ENST00000445180 MAP3K19Q56UN5 1328 aa19.32■□□□□ 0.68
LINC01648-201ENST00000445180 ZNF335Q9H4Z2 1342 aaPredicted RBP19.32■□□□□ 0.68
LINC01648-201ENST00000445180 DUSP27Q5VZP5 1158 aa19.32■□□□□ 0.68
LINC01648-201ENST00000445180 RSPH6AQ9H0K4 717 aa19.32■□□□□ 0.68
LINC01648-201ENST00000445180 USP54Q70EL1 1684 aa19.32■□□□□ 0.68
LINC01648-201ENST00000445180 NUTM2GQ5VZR2 741 aa19.31■□□□□ 0.68
LINC01648-201ENST00000445180 KRT28Q7Z3Y7 464 aa19.31■□□□□ 0.68
LINC01648-201ENST00000445180 WDR63Q8IWG1 891 aa19.31■□□□□ 0.68
LINC01648-201ENST00000445180 LRRC7Q96NW7 1537 aa19.31■□□□□ 0.68
LINC01648-201ENST00000445180 RRP7AQ9Y3A4 280 aaKnown RBP19.3■□□□□ 0.68
LINC01648-201ENST00000445180 E9PSI1 815 aa19.3■□□□□ 0.68
LINC01648-201ENST00000445180 TMPOP42166 694 aaKnown RBP19.3■□□□□ 0.68
LINC01648-201ENST00000445180 EIF4A2Q14240 407 aaKnown RBP19.3■□□□□ 0.68
LINC01648-201ENST00000445180 NEUROD2Q15784 382 aa19.3■□□□□ 0.68
LINC01648-201ENST00000445180 SBNO1A3KN83 1393 aa19.3■□□□□ 0.68
LINC01648-201ENST00000445180 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
LINC01648-201ENST00000445180 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
LINC01648-201ENST00000445180 SOX12O15370 315 aa19.29■□□□□ 0.68
LINC01648-201ENST00000445180 HSP90AB2PQ58FF8 381 aa19.29■□□□□ 0.68
LINC01648-201ENST00000445180 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
LINC01648-201ENST00000445180 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
LINC01648-201ENST00000445180 AMPHP49418 695 aa19.28■□□□□ 0.68
LINC01648-201ENST00000445180 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
LINC01648-201ENST00000445180 FLT4P35916 1363 aa19.27■□□□□ 0.68
LINC01648-201ENST00000445180 NEFMP07197 916 aa19.27■□□□□ 0.68
LINC01648-201ENST00000445180 PRKAR2BP31323 418 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms