RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
LINC00642-203ENST00000444942 SLC34A2O95436 690 aa13.68□□□□□ -0.22
LINC00642-203ENST00000444942 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
LINC00642-203ENST00000444942 HSPA6P17066 643 aa13.67□□□□□ -0.22
LINC00642-203ENST00000444942 PDGFDQ9GZP0 370 aaPredicted RBP13.67□□□□□ -0.22
LINC00642-203ENST00000444942 ARHGEF10O15013 1369 aa13.66□□□□□ -0.22
LINC00642-203ENST00000444942 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
LINC00642-203ENST00000444942 PSME1Q06323 249 aa13.65□□□□□ -0.22
LINC00642-203ENST00000444942 SBNO1A3KN83 1393 aa13.65□□□□□ -0.23
LINC00642-203ENST00000444942 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
LINC00642-203ENST00000444942 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
LINC00642-203ENST00000444942 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
LINC00642-203ENST00000444942 GOLGB1Q14789 3259 aaKnown RBP13.64□□□□□ -0.23
LINC00642-203ENST00000444942 KIF1BO60333 1816 aa13.64□□□□□ -0.23
LINC00642-203ENST00000444942 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
LINC00642-203ENST00000444942 SPATA31A1Q5TZJ5 1347 aa13.63□□□□□ -0.23
LINC00642-203ENST00000444942 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
LINC00642-203ENST00000444942 MAP3K5Q99683 1374 aa13.62□□□□□ -0.23
LINC00642-203ENST00000444942 CRYBG1Q9Y4K1 1723 aa13.62□□□□□ -0.23
LINC00642-203ENST00000444942 CAPN15O75808 1086 aa13.61□□□□□ -0.23
LINC00642-203ENST00000444942 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
LINC00642-203ENST00000444942 IFT172Q9UG01 1749 aa13.6□□□□□ -0.23
LINC00642-203ENST00000444942 GPR162Q16538 588 aa13.6□□□□□ -0.23
LINC00642-203ENST00000444942 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
LINC00642-203ENST00000444942 ALS2Q96Q42 1657 aa13.59□□□□□ -0.23
LINC00642-203ENST00000444942 PDE3BQ13370 1112 aa13.59□□□□□ -0.23
LINC00642-203ENST00000444942 TRPM3Q9HCF6 1732 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-203ENST00000444942 NRXN1Q9ULB1 1477 aa13.59□□□□□ -0.23
LINC00642-203ENST00000444942 PLSCR1O15162 318 aa13.58□□□□□ -0.23
LINC00642-203ENST00000444942 PRELPP51888 382 aa13.58□□□□□ -0.23
LINC00642-203ENST00000444942 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
LINC00642-203ENST00000444942 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
LINC00642-203ENST00000444942 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
LINC00642-203ENST00000444942 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
LINC00642-203ENST00000444942 PEAK1Q9H792 1746 aa13.56□□□□□ -0.24
LINC00642-203ENST00000444942 TECPR2O15040 1411 aa13.56□□□□□ -0.24
LINC00642-203ENST00000444942 COL13A1Q5TAT6 717 aaPredicted RBP13.56□□□□□ -0.24
LINC00642-203ENST00000444942 ARXQ96QS3 562 aa13.56□□□□□ -0.24
LINC00642-203ENST00000444942 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
LINC00642-203ENST00000444942 PPLO60437 1756 aa13.55□□□□□ -0.24
LINC00642-203ENST00000444942 BARGINQ6ZT62 677 aa13.55□□□□□ -0.24
LINC00642-203ENST00000444942 WAPLQ7Z5K2 1190 aa13.55□□□□□ -0.24
LINC00642-203ENST00000444942 ATP10DQ9P241 1426 aa13.54□□□□□ -0.24
LINC00642-203ENST00000444942 BCL11BQ9C0K0 894 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-203ENST00000444942 PCDH10Q9P2E7 1040 aa13.54□□□□□ -0.24
LINC00642-203ENST00000444942 C11orf95C9JLR9 678 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-203ENST00000444942 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
LINC00642-203ENST00000444942 PRDM11Q9NQV5 511 aa13.52□□□□□ -0.25
LINC00642-203ENST00000444942 ACIN1Q9UKV3 1341 aaKnown RBP13.52□□□□□ -0.25
LINC00642-203ENST00000444942 PROM2Q8N271 834 aa13.51□□□□□ -0.25
LINC00642-203ENST00000444942 GPBP1L1Q9HC44 474 aaPredicted RBP13.51□□□□□ -0.25
LINC00642-203ENST00000444942 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
LINC00642-203ENST00000444942 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
LINC00642-203ENST00000444942 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 TNS4Q8IZW8 715 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 DNAJC5GQ8N7S2 189 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 STK32BQ9NY57 414 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 USP35Q9P2H5 1018 aa13.5□□□□□ -0.25
LINC00642-203ENST00000444942 OVOS2A0A0G2JMS6 1433 aa13.49□□□□□ -0.25
LINC00642-203ENST00000444942 OVOS2A0A0J9YW53 1432 aa13.49□□□□□ -0.25
LINC00642-203ENST00000444942 OVOS2Q6IE36 1432 aa13.49□□□□□ -0.25
LINC00642-203ENST00000444942 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
LINC00642-203ENST00000444942 COL24A1Q17RW2 1714 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
LINC00642-203ENST00000444942 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 APLP1P51693 650 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 STK26Q9P289 416 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 KIAA0232Q92628 1395 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 ABCC11Q96J66 1382 aa13.47□□□□□ -0.25
LINC00642-203ENST00000444942 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
LINC00642-203ENST00000444942 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 ANKRD30BQ9BXX2 1392 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 CHRNA2Q15822 529 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 PTF1AQ7RTS3 328 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 PMFBP1Q8TBY8 1022 aa13.45□□□□□ -0.26
LINC00642-203ENST00000444942 ATP7BP35670 1465 aa13.44□□□□□ -0.26
LINC00642-203ENST00000444942 ADCY9O60503 1353 aa13.44□□□□□ -0.26
LINC00642-203ENST00000444942 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
LINC00642-203ENST00000444942 LRRC37A3O60309 1634 aa13.44□□□□□ -0.26
LINC00642-203ENST00000444942 WDR90Q96KV7 1748 aa13.43□□□□□ -0.26
LINC00642-203ENST00000444942 DHX57Q6P158 1386 aaKnown RBP13.43□□□□□ -0.26
LINC00642-203ENST00000444942 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
LINC00642-203ENST00000444942 TXNRD1Q16881 649 aa13.43□□□□□ -0.26
LINC00642-203ENST00000444942 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
LINC00642-203ENST00000444942 SPATA31E1Q6ZUB1 1445 aa13.42□□□□□ -0.26
LINC00642-203ENST00000444942 YBX3P16989 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
LINC00642-203ENST00000444942 EVA1CP58658 441 aa13.42□□□□□ -0.26
LINC00642-203ENST00000444942 PCNTO95613 3336 aa13.42□□□□□ -0.26
LINC00642-203ENST00000444942 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
LINC00642-203ENST00000444942 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
LINC00642-203ENST00000444942 LMO7Q8WWI1 1683 aa13.41□□□□□ -0.26
LINC00642-203ENST00000444942 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
LINC00642-203ENST00000444942 LARP1Q6PKG0 1096 aaKnown RBP13.41□□□□□ -0.26
LINC00642-203ENST00000444942 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
LINC00642-203ENST00000444942 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
LINC00642-203ENST00000444942 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
LINC00642-203ENST00000444942 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-203ENST00000444942 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms