RNA–Protein interactions for RNA: ENST00000444724.5

CARF-216, Transcript of calcium responsive transcription factor, humanhuman

TSL 1 (best) BASIC

Gene CARF, Length 2,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-216ENST00000444724 GLI3P10071 1580 aa12.46□□□□□ -0.41
CARF-216ENST00000444724 ABCC6O95255 1503 aa12.46□□□□□ -0.42
CARF-216ENST00000444724 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
CARF-216ENST00000444724 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
CARF-216ENST00000444724 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
CARF-216ENST00000444724 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
CARF-216ENST00000444724 QTRT2Q9H974 415 aaKnown RBP12.45□□□□□ -0.42
CARF-216ENST00000444724 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
CARF-216ENST00000444724 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
CARF-216ENST00000444724 USP21Q9UK80 565 aa12.44□□□□□ -0.42
CARF-216ENST00000444724 C8orf37Q96NL8 207 aa12.44□□□□□ -0.42
CARF-216ENST00000444724 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
CARF-216ENST00000444724 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
CARF-216ENST00000444724 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
CARF-216ENST00000444724 THSD7AQ9UPZ6 1657 aa12.43□□□□□ -0.42
CARF-216ENST00000444724 ZBTB22O15209 634 aa12.43□□□□□ -0.42
CARF-216ENST00000444724 UNC5CLQ8IV45 518 aa12.43□□□□□ -0.42
CARF-216ENST00000444724 RALGAPBQ86X10 1494 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 FOXO3O43524 673 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 VPS72Q15906 364 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 NRKQ7Z2Y5 1582 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 PRR36Q9H6K5 1346 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
CARF-216ENST00000444724 SLIT3O75094 1523 aa12.41□□□□□ -0.42
CARF-216ENST00000444724 ONECUT3O60422 494 aaPredicted RBP12.41□□□□□ -0.42
CARF-216ENST00000444724 LMO7Q8WWI1 1683 aa12.4□□□□□ -0.42
CARF-216ENST00000444724 TRAK1Q9UPV9 953 aa12.4□□□□□ -0.42
CARF-216ENST00000444724 CPDO75976 1380 aa12.4□□□□□ -0.42
CARF-216ENST00000444724 GJD4Q96KN9 370 aaPredicted RBP12.39□□□□□ -0.43
CARF-216ENST00000444724 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
CARF-216ENST00000444724 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
CARF-216ENST00000444724 CENPJQ9HC77 1338 aaPredicted RBP12.39□□□□□ -0.43
CARF-216ENST00000444724 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
CARF-216ENST00000444724 USP19O94966 1318 aa12.38□□□□□ -0.43
CARF-216ENST00000444724 RGPD1P0DJD0 1748 aa12.38□□□□□ -0.43
CARF-216ENST00000444724 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
CARF-216ENST00000444724 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
CARF-216ENST00000444724 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
CARF-216ENST00000444724 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
CARF-216ENST00000444724 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
CARF-216ENST00000444724 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
CARF-216ENST00000444724 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
CARF-216ENST00000444724 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
CARF-216ENST00000444724 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
CARF-216ENST00000444724 BRWD3Q6RI45 1802 aa12.35□□□□□ -0.43
CARF-216ENST00000444724 DISP2A7MBM2 1401 aa12.34□□□□□ -0.43
CARF-216ENST00000444724 C11orf95C9JLR9 678 aaPredicted RBP12.34□□□□□ -0.43
CARF-216ENST00000444724 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
CARF-216ENST00000444724 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
CARF-216ENST00000444724 USP6P35125 1406 aa12.34□□□□□ -0.43
CARF-216ENST00000444724 PARP4Q9UKK3 1724 aaKnown RBP12.33□□□□□ -0.43
CARF-216ENST00000444724 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
CARF-216ENST00000444724 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
CARF-216ENST00000444724 RGPD3A6NKT7 1758 aaPredicted RBP12.33□□□□□ -0.44
CARF-216ENST00000444724 RGPD4Q7Z3J3 1758 aa12.33□□□□□ -0.44
CARF-216ENST00000444724 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
CARF-216ENST00000444724 L3MBTL2Q969R5 705 aa12.32□□□□□ -0.44
CARF-216ENST00000444724 TTC21AQ8NDW8 1320 aa12.32□□□□□ -0.44
CARF-216ENST00000444724 PIK3C2AO00443 1686 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 CPSF1Q10570 1443 aaKnown RBP12.31□□□□□ -0.44
CARF-216ENST00000444724 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
CARF-216ENST00000444724 ROCK2O75116 1388 aaKnown RBP12.31□□□□□ -0.44
CARF-216ENST00000444724 ACEP12821 1306 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 SPATA31A5Q5VU36 1347 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 SPATA31A7Q8IWB4 1347 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 CLSPNQ9HAW4 1339 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 COL18A1P39060 1754 aa12.31□□□□□ -0.44
CARF-216ENST00000444724 XPCQ01831 940 aaPredicted RBP12.3□□□□□ -0.44
CARF-216ENST00000444724 PMFBP1Q8TBY8 1022 aa12.3□□□□□ -0.44
CARF-216ENST00000444724 THRAP3Q9Y2W1 955 aaKnown RBP12.3□□□□□ -0.44
CARF-216ENST00000444724 LRP5O75197 1615 aa12.3□□□□□ -0.44
CARF-216ENST00000444724 TNS1Q9HBL0 1735 aaKnown RBP12.3□□□□□ -0.44
CARF-216ENST00000444724 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
CARF-216ENST00000444724 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
CARF-216ENST00000444724 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
CARF-216ENST00000444724 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
CARF-216ENST00000444724 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 NBPF1Q3BBV0 1214 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 PARD3Q8TEW0 1356 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 NLRP13Q86W25 1043 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 AATKQ6ZMQ8 1374 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 BCL9O00512 1426 aa12.28□□□□□ -0.44
CARF-216ENST00000444724 FAM208AQ9UK61 1670 aaKnown RBP12.27□□□□□ -0.44
CARF-216ENST00000444724 HIRIP3Q9BW71 556 aaPredicted RBP12.27□□□□□ -0.45
CARF-216ENST00000444724 NFAT5O94916 1531 aa12.26□□□□□ -0.45
CARF-216ENST00000444724 RREB1Q92766 1687 aa12.26□□□□□ -0.45
CARF-216ENST00000444724 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
CARF-216ENST00000444724 SPATA31A1Q5TZJ5 1347 aa12.26□□□□□ -0.45
CARF-216ENST00000444724 TONSLQ96HA7 1378 aa12.25□□□□□ -0.45
CARF-216ENST00000444724 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
CARF-216ENST00000444724 SEPT12Q8IYM1 358 aa12.25□□□□□ -0.45
CARF-216ENST00000444724 COL5A2P05997 1499 aaPredicted RBP12.25□□□□□ -0.45
CARF-216ENST00000444724 KIAA0232Q92628 1395 aa12.25□□□□□ -0.45
CARF-216ENST00000444724 CAMTA1Q9Y6Y1 1673 aa12.24□□□□□ -0.45
CARF-216ENST00000444724 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
CARF-216ENST00000444724 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
CARF-216ENST00000444724 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
CARF-216ENST00000444724 KCNH5Q8NCM2 988 aa12.24□□□□□ -0.45
CARF-216ENST00000444724 UBE2Q2Q8WVN8 375 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms