RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 POLR3AO14802 1390 aaPredicted RBP31.73■■■□□ 2.67
LMBR1-211ENST00000444719 RALGAPBQ86X10 1494 aa31.72■■■□□ 2.67
LMBR1-211ENST00000444719 ATRNO75882 1429 aa31.71■■■□□ 2.67
LMBR1-211ENST00000444719 CDK12Q9NYV4 1490 aaPredicted RBP31.71■■■□□ 2.67
LMBR1-211ENST00000444719 NUTM2GQ5VZR2 741 aa31.69■■■□□ 2.66
LMBR1-211ENST00000444719 CABP1Q9NZU7 370 aa31.69■■■□□ 2.66
LMBR1-211ENST00000444719 SLIT2O94813 1529 aa31.68■■■□□ 2.66
LMBR1-211ENST00000444719 RGS12O14924 1447 aa31.67■■■□□ 2.66
LMBR1-211ENST00000444719 UNC5CLQ8IV45 518 aa31.67■■■□□ 2.66
LMBR1-211ENST00000444719 PLCH1Q4KWH8 1693 aa31.67■■■□□ 2.66
LMBR1-211ENST00000444719 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.66■■■□□ 2.66
LMBR1-211ENST00000444719 FAM83GA6ND36 823 aa31.66■■■□□ 2.66
LMBR1-211ENST00000444719 CRYBG1Q9Y4K1 1723 aa31.66■■■□□ 2.66
LMBR1-211ENST00000444719 GJD4Q96KN9 370 aaPredicted RBP31.62■■■□□ 2.65
LMBR1-211ENST00000444719 NWD2Q9ULI1 1742 aa31.61■■■□□ 2.65
LMBR1-211ENST00000444719 ABTB2Q8N961 1025 aa31.61■■■□□ 2.65
LMBR1-211ENST00000444719 PHRF1Q9P1Y6 1649 aaKnown RBP31.58■■■□□ 2.65
LMBR1-211ENST00000444719 COL14A1Q05707 1796 aaKnown RBP31.56■■■□□ 2.64
LMBR1-211ENST00000444719 CCDC9Q9Y3X0 531 aaKnown RBP31.56■■■□□ 2.64
LMBR1-211ENST00000444719 SBNO2Q9Y2G9 1366 aa31.56■■■□□ 2.64
LMBR1-211ENST00000444719 BTG4Q9NY30 223 aa31.55■■■□□ 2.64
LMBR1-211ENST00000444719 ZC3H6P61129 1189 aaKnown RBP31.54■■■□□ 2.64
LMBR1-211ENST00000444719 UPF1Q92900 1129 aaKnown RBP eCLIP31.54■■■□□ 2.64
LMBR1-211ENST00000444719 PRDM11Q9NQV5 511 aa31.54■■■□□ 2.64
LMBR1-211ENST00000444719 USP6P35125 1406 aa31.54■■■□□ 2.64
LMBR1-211ENST00000444719 GLI3P10071 1580 aa31.54■■■□□ 2.64
LMBR1-211ENST00000444719 ATAD2Q6PL18 1390 aa31.53■■■□□ 2.64
LMBR1-211ENST00000444719 VPS72Q15906 364 aa31.52■■■□□ 2.64
LMBR1-211ENST00000444719 CLSPNQ9HAW4 1339 aa31.51■■■□□ 2.64
LMBR1-211ENST00000444719 AKAP12Q02952 1782 aa31.51■■■□□ 2.64
LMBR1-211ENST00000444719 CHRNA2Q15822 529 aa31.51■■■□□ 2.63
LMBR1-211ENST00000444719 NRAPQ86VF7 1730 aa31.51■■■□□ 2.63
LMBR1-211ENST00000444719 KIAA0232Q92628 1395 aa31.51■■■□□ 2.63
LMBR1-211ENST00000444719 ST20-MTHFSA0A0A6YYL1 179 aa31.5■■■□□ 2.63
LMBR1-211ENST00000444719 NLRP13Q86W25 1043 aa31.5■■■□□ 2.63
LMBR1-211ENST00000444719 BRD4O60885 1362 aaPredicted RBP31.49■■■□□ 2.63
LMBR1-211ENST00000444719 CCER1Q8TC90 406 aaPredicted RBP31.49■■■□□ 2.63
LMBR1-211ENST00000444719 ZNF692Q9BU19 519 aaPredicted RBP31.47■■■□□ 2.63
LMBR1-211ENST00000444719 NLRP6P59044 892 aa31.46■■■□□ 2.63
LMBR1-211ENST00000444719 TMC1Q8TDI8 760 aa31.46■■■□□ 2.63
LMBR1-211ENST00000444719 SSH2Q76I76 1423 aa31.45■■■□□ 2.63
LMBR1-211ENST00000444719 NRKQ7Z2Y5 1582 aa31.45■■■□□ 2.63
LMBR1-211ENST00000444719 USP19O94966 1318 aa31.45■■■□□ 2.62
LMBR1-211ENST00000444719 TIMELESSQ9UNS1 1208 aa31.44■■■□□ 2.62
LMBR1-211ENST00000444719 BRWD3Q6RI45 1802 aa31.44■■■□□ 2.62
LMBR1-211ENST00000444719 PIK3C2AO00443 1686 aa31.44■■■□□ 2.62
LMBR1-211ENST00000444719 GCP02774 474 aa31.43■■■□□ 2.62
LMBR1-211ENST00000444719 TESK2Q96S53 571 aa31.43■■■□□ 2.62
LMBR1-211ENST00000444719 TTC21BQ7Z4L5 1316 aa31.43■■■□□ 2.62
LMBR1-211ENST00000444719 KTN1Q86UP2 1357 aaKnown RBP31.43■■■□□ 2.62
LMBR1-211ENST00000444719 CPSF1Q10570 1443 aaKnown RBP31.42■■■□□ 2.62
LMBR1-211ENST00000444719 SEPT12Q8IYM1 358 aa31.41■■■□□ 2.62
LMBR1-211ENST00000444719 SLC12A5Q9H2X9 1139 aa31.41■■■□□ 2.62
LMBR1-211ENST00000444719 STRN4Q9NRL3 753 aa31.4■■■□□ 2.62
LMBR1-211ENST00000444719 MON2Q7Z3U7 1717 aa31.39■■■□□ 2.62
LMBR1-211ENST00000444719 USP47Q96K76 1375 aa31.39■■■□□ 2.62
LMBR1-211ENST00000444719 ZBTB7CA1YPR0 619 aa31.38■■■□□ 2.61
LMBR1-211ENST00000444719 A0A0G2JS52 829 aa31.37■■■□□ 2.61
LMBR1-211ENST00000444719 MYT1Q01538 1121 aa31.37■■■□□ 2.61
LMBR1-211ENST00000444719 FAM98CQ17RN3 349 aaKnown RBP31.37■■■□□ 2.61
LMBR1-211ENST00000444719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.36■■■□□ 2.612e-6■■□□□ 12.3
LMBR1-211ENST00000444719 CPDO75976 1380 aa31.35■■■□□ 2.61
LMBR1-211ENST00000444719 TTC21AQ8NDW8 1320 aa31.35■■■□□ 2.61
LMBR1-211ENST00000444719 EVA1CP58658 441 aa31.35■■■□□ 2.61
LMBR1-211ENST00000444719 CD163L1Q9NR16 1453 aa31.34■■■□□ 2.61
LMBR1-211ENST00000444719 SPATA31A5Q5VU36 1347 aa31.34■■■□□ 2.61
LMBR1-211ENST00000444719 SPATA31A7Q8IWB4 1347 aa31.34■■■□□ 2.61
LMBR1-211ENST00000444719 ONECUT3O60422 494 aaPredicted RBP31.34■■■□□ 2.61
LMBR1-211ENST00000444719 PUS7Q96PZ0 661 aaKnown RBP31.34■■■□□ 2.61
LMBR1-211ENST00000444719 CAMTA1Q9Y6Y1 1673 aa31.33■■■□□ 2.61
LMBR1-211ENST00000444719 HDGFL2Q7Z4V5 671 aaPredicted RBP31.33■■■□□ 2.61
LMBR1-211ENST00000444719 SLIT3O75094 1523 aa31.33■■■□□ 2.61
LMBR1-211ENST00000444719 SOX12O15370 315 aa31.32■■■□□ 2.6
LMBR1-211ENST00000444719 LMO7Q8WWI1 1683 aa31.32■■■□□ 2.6
LMBR1-211ENST00000444719 SLC24A1O60721 1099 aa31.31■■■□□ 2.6
LMBR1-211ENST00000444719 ZRANB1Q9UGI0 708 aa31.31■■■□□ 2.6
LMBR1-211ENST00000444719 TERF2IPQ9NYB0 399 aa31.3■■■□□ 2.6
LMBR1-211ENST00000444719 EP400Q96L91 3159 aa31.3■■■□□ 2.6
LMBR1-211ENST00000444719 USP35Q9P2H5 1018 aa31.29■■■□□ 2.6
LMBR1-211ENST00000444719 SPATA31A1Q5TZJ5 1347 aa31.27■■■□□ 2.6
LMBR1-211ENST00000444719 TMF1P82094 1093 aa31.27■■■□□ 2.6
LMBR1-211ENST00000444719 LARP1Q6PKG0 1096 aaKnown RBP31.27■■■□□ 2.6
LMBR1-211ENST00000444719 NME9Q86XW9 330 aa31.27■■■□□ 2.6
LMBR1-211ENST00000444719 A0A1W2PP64 1363 aa31.27■■■□□ 2.6
LMBR1-211ENST00000444719 KRT27Q7Z3Y8 459 aa31.26■■■□□ 2.59
LMBR1-211ENST00000444719 KCNH5Q8NCM2 988 aa31.24■■■□□ 2.59
LMBR1-211ENST00000444719 RGPD5Q99666 1765 aa31.23■■■□□ 2.59
LMBR1-211ENST00000444719 EDC4Q6P2E9 1401 aaKnown RBP31.23■■■□□ 2.59
LMBR1-211ENST00000444719 COL18A1P39060 1754 aa31.22■■■□□ 2.59
LMBR1-211ENST00000444719 AATKQ6ZMQ8 1374 aa31.21■■■□□ 2.59
LMBR1-211ENST00000444719 COL5A2P05997 1499 aaPredicted RBP31.21■■■□□ 2.59
LMBR1-211ENST00000444719 NINLQ9Y2I6 1382 aa31.2■■■□□ 2.59
LMBR1-211ENST00000444719 ARHGEF25Q86VW2 580 aa31.2■■■□□ 2.59
LMBR1-211ENST00000444719 THSD7AQ9UPZ6 1657 aa31.19■■■□□ 2.58
LMBR1-211ENST00000444719 AXIN2Q9Y2T1 843 aa31.19■■■□□ 2.58
LMBR1-211ENST00000444719 USP31Q70CQ4 1352 aa31.18■■■□□ 2.58
LMBR1-211ENST00000444719 NFAT5O94916 1531 aa31.18■■■□□ 2.58
LMBR1-211ENST00000444719 FAM182BQ5T319 152 aa31.17■■■□□ 2.58
LMBR1-211ENST00000444719 USP54Q70EL1 1684 aa31.16■■■□□ 2.58
LMBR1-211ENST00000444719 CCDC125Q86Z20 511 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms