RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 PNNQ9H307 717 aaKnown RBP24.09■■□□□ 1.45
PMPCB-204ENST00000444457 RRP9O43818 475 aaKnown RBP24.08■■□□□ 1.45
PMPCB-204ENST00000444457 XRCC6P12956 609 aaKnown RBP eCLIP24.08■■□□□ 1.45
PMPCB-204ENST00000444457 PRAM1Q96QH2 718 aa24.08■■□□□ 1.44
PMPCB-204ENST00000444457 SLKQ9H2G2 1235 aaPredicted RBP24.08■■□□□ 1.44
PMPCB-204ENST00000444457 NCBP3Q53F19 620 aaKnown RBP24.07■■□□□ 1.44
PMPCB-204ENST00000444457 REREQ9P2R6 1566 aa24.07■■□□□ 1.44
PMPCB-204ENST00000444457 MINK1Q8N4C8 1332 aaPredicted RBP24.07■■□□□ 1.44
PMPCB-204ENST00000444457 NAP1L5Q96NT1 182 aaPredicted RBP24.07■■□□□ 1.44
PMPCB-204ENST00000444457 U2AF1L5P0DN76 240 aaPredicted RBP24.06■■□□□ 1.44
PMPCB-204ENST00000444457 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
PMPCB-204ENST00000444457 U2AF1Q01081 240 aaKnown RBP eCLIP24.06■■□□□ 1.44
PMPCB-204ENST00000444457 MAPK8IP3Q9UPT6 1336 aa24.06■■□□□ 1.44
PMPCB-204ENST00000444457 CD163L1Q9NR16 1453 aa24.06■■□□□ 1.44
PMPCB-204ENST00000444457 SEC24BO95487 1268 aa24.06■■□□□ 1.44
PMPCB-204ENST00000444457 ZMYND15Q9H091 742 aa24.06■■□□□ 1.44
PMPCB-204ENST00000444457 RARSP54136 660 aaKnown RBP24.05■■□□□ 1.44
PMPCB-204ENST00000444457 GOLGA6L3A6NEY3 463 aa24.05■■□□□ 1.44
PMPCB-204ENST00000444457 HSP90AA2PQ14568 343 aaPredicted RBP24.04■■□□□ 1.44
PMPCB-204ENST00000444457 VSIG10Q8N0Z9 540 aa24.04■■□□□ 1.44
PMPCB-204ENST00000444457 MED14O60244 1454 aa24.04■■□□□ 1.44
PMPCB-204ENST00000444457 AGLP35573 1532 aa24.04■■□□□ 1.44
PMPCB-204ENST00000444457 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
PMPCB-204ENST00000444457 TERF2IPQ9NYB0 399 aa24.03■■□□□ 1.44
PMPCB-204ENST00000444457 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
PMPCB-204ENST00000444457 COL3A1P02461 1466 aaPredicted RBP24.03■■□□□ 1.44
PMPCB-204ENST00000444457 IGHDP01880 384 aa24.02■■□□□ 1.44
PMPCB-204ENST00000444457 HSP90AA1P07900 732 aaKnown RBP24.02■■□□□ 1.44
PMPCB-204ENST00000444457 COG6Q9Y2V7 657 aa24.02■■□□□ 1.44
PMPCB-204ENST00000444457 CLUAP1Q96AJ1 413 aa24.01■■□□□ 1.43
PMPCB-204ENST00000444457 ARHGEF40Q8TER5 1519 aa24.01■■□□□ 1.43
PMPCB-204ENST00000444457 TRHP20396 242 aaPredicted RBP24.01■■□□□ 1.43
PMPCB-204ENST00000444457 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
PMPCB-204ENST00000444457 KIF20BQ96Q89 1820 aa24■■□□□ 1.43
PMPCB-204ENST00000444457 FYB1O15117 783 aa23.99■■□□□ 1.43
PMPCB-204ENST00000444457 MYH16Q9H6N6 1097 aa23.99■■□□□ 1.43
PMPCB-204ENST00000444457 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
PMPCB-204ENST00000444457 SPATA31D1Q6ZQQ2 1576 aa23.98■■□□□ 1.43
PMPCB-204ENST00000444457 SETD1AO15047 1707 aaKnown RBP23.97■■□□□ 1.43
PMPCB-204ENST00000444457 A2ML1A8K2U0 1454 aa23.97■■□□□ 1.43
PMPCB-204ENST00000444457 PANK2Q9BZ23 570 aa23.96■■□□□ 1.43
PMPCB-204ENST00000444457 ZMYM3Q14202 1370 aa23.96■■□□□ 1.43
PMPCB-204ENST00000444457 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
PMPCB-204ENST00000444457 CDK19Q9BWU1 502 aa23.96■■□□□ 1.43
PMPCB-204ENST00000444457 DLC1Q96QB1 1528 aa23.96■■□□□ 1.43
PMPCB-204ENST00000444457 HDGFL2Q7Z4V5 671 aaPredicted RBP23.95■■□□□ 1.43
PMPCB-204ENST00000444457 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
PMPCB-204ENST00000444457 TBC1D32Q96NH3 1257 aa23.95■■□□□ 1.42
PMPCB-204ENST00000444457 TBC1D2Q9BYX2 928 aa23.95■■□□□ 1.42
PMPCB-204ENST00000444457 MCM4P33991 863 aa23.94■■□□□ 1.42
PMPCB-204ENST00000444457 AAMPQ13685 434 aa23.94■■□□□ 1.42
PMPCB-204ENST00000444457 BCL2L13Q9BXK5 485 aa23.94■■□□□ 1.42
PMPCB-204ENST00000444457 RLBP1P12271 317 aa23.93■■□□□ 1.42
PMPCB-204ENST00000444457 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
PMPCB-204ENST00000444457 ARXQ96QS3 562 aa23.92■■□□□ 1.42
PMPCB-204ENST00000444457 CABP1Q9NZU7 370 aa23.92■■□□□ 1.42
PMPCB-204ENST00000444457 TNNQ9UQP3 1299 aa23.92■■□□□ 1.42
PMPCB-204ENST00000444457 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
PMPCB-204ENST00000444457 MRE11P49959 708 aa23.91■■□□□ 1.42
PMPCB-204ENST00000444457 UPF2Q9HAU5 1272 aaKnown RBP23.91■■□□□ 1.42
PMPCB-204ENST00000444457 PNPLA6Q8IY17 1366 aa23.9■■□□□ 1.42
PMPCB-204ENST00000444457 CT47B1P0C2W7 299 aaPredicted RBP23.89■■□□□ 1.41
PMPCB-204ENST00000444457 ATP7BP35670 1465 aa23.88■■□□□ 1.41
PMPCB-204ENST00000444457 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
PMPCB-204ENST00000444457 PMFBP1Q8TBY8 1022 aa23.88■■□□□ 1.41
PMPCB-204ENST00000444457 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
PMPCB-204ENST00000444457 TSR2Q969E8 191 aaKnown RBP23.87■■□□□ 1.41
PMPCB-204ENST00000444457 CDC42BPGQ6DT37 1551 aa23.86■■□□□ 1.41
PMPCB-204ENST00000444457 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
PMPCB-204ENST00000444457 NRXN3Q9Y4C0 1643 aa23.86■■□□□ 1.41
PMPCB-204ENST00000444457 GZF1Q9H116 711 aaPredicted RBP23.86■■□□□ 1.41
PMPCB-204ENST00000444457 PCDHB15Q9Y5E8 787 aa23.85■■□□□ 1.41
PMPCB-204ENST00000444457 TRAK2O60296 914 aa23.85■■□□□ 1.41
PMPCB-204ENST00000444457 ISY1Q9ULR0 285 aaKnown RBP23.84■■□□□ 1.41
PMPCB-204ENST00000444457 IL16Q14005 1332 aa23.84■■□□□ 1.41
PMPCB-204ENST00000444457 ESPNB1AK53 854 aa23.84■■□□□ 1.41
PMPCB-204ENST00000444457 MLECQ14165 292 aa23.84■■□□□ 1.41
PMPCB-204ENST00000444457 ZKSCAN2Q63HK3 967 aa23.84■■□□□ 1.41
PMPCB-204ENST00000444457 EXOSC9Q06265 439 aaKnown RBP23.83■■□□□ 1.41
PMPCB-204ENST00000444457 MVPQ14764 893 aaKnown RBP23.83■■□□□ 1.4
PMPCB-204ENST00000444457 MAP2P11137 1827 aaKnown RBP23.82■■□□□ 1.4
PMPCB-204ENST00000444457 LRRC7Q96NW7 1537 aa23.82■■□□□ 1.4
PMPCB-204ENST00000444457 CHMP5Q9NZZ3 219 aa23.82■■□□□ 1.4
PMPCB-204ENST00000444457 GRPEL1Q9HAV7 217 aa23.81■■□□□ 1.4
PMPCB-204ENST00000444457 RIPK4P57078 832 aa23.81■■□□□ 1.4
PMPCB-204ENST00000444457 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.81■■□□□ 1.4
PMPCB-204ENST00000444457 ERBB4Q15303 1308 aa23.8■■□□□ 1.4
PMPCB-204ENST00000444457 DZIP1LQ8IYY4 767 aaKnown RBP23.8■■□□□ 1.4
PMPCB-204ENST00000444457 SMC4Q9NTJ3 1288 aa23.8■■□□□ 1.4
PMPCB-204ENST00000444457 FTSJ3Q8IY81 847 aaKnown RBP23.79■■□□□ 1.4
PMPCB-204ENST00000444457 FCHSD2O94868 740 aa23.78■■□□□ 1.4
PMPCB-204ENST00000444457 POLKQ9UBT6 870 aa23.78■■□□□ 1.4
PMPCB-204ENST00000444457 KNDC1Q76NI1 1749 aa23.78■■□□□ 1.4
PMPCB-204ENST00000444457 RWDD1Q9H446 243 aaPredicted RBP23.77■■□□□ 1.4
PMPCB-204ENST00000444457 CPSF1Q10570 1443 aaKnown RBP23.77■■□□□ 1.4
PMPCB-204ENST00000444457 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
PMPCB-204ENST00000444457 TPM2P07951 284 aa23.77■■□□□ 1.4
PMPCB-204ENST00000444457 SSH1Q8WYL5 1049 aa23.77■■□□□ 1.4
PMPCB-204ENST00000444457 METP08581 1390 aa23.76■■□□□ 1.39
PMPCB-204ENST00000444457 EDC4Q6P2E9 1401 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms