RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 CD163L1Q9NR16 1453 aa23.99■■□□□ 1.43
AP1S3-207ENST00000444408 C11orf95C9JLR9 678 aaPredicted RBP23.98■■□□□ 1.43
AP1S3-207ENST00000444408 SLC24A1O60721 1099 aa23.98■■□□□ 1.43
AP1S3-207ENST00000444408 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.43
AP1S3-207ENST00000444408 USP6P35125 1406 aa23.98■■□□□ 1.43
AP1S3-207ENST00000444408 CPSF1Q10570 1443 aaKnown RBP23.97■■□□□ 1.43
AP1S3-207ENST00000444408 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
AP1S3-207ENST00000444408 COL22A1Q8NFW1 1626 aaPredicted RBP23.97■■□□□ 1.43
AP1S3-207ENST00000444408 ALS2Q96Q42 1657 aa23.96■■□□□ 1.43
AP1S3-207ENST00000444408 RXRBP28702 533 aa23.96■■□□□ 1.43
AP1S3-207ENST00000444408 ADAMTS2O95450 1211 aa23.95■■□□□ 1.42
AP1S3-207ENST00000444408 SSH2Q76I76 1423 aa23.94■■□□□ 1.42
AP1S3-207ENST00000444408 POLR3GLQ9BT43 218 aa23.94■■□□□ 1.42
AP1S3-207ENST00000444408 ARHGEF10O15013 1369 aa23.93■■□□□ 1.42
AP1S3-207ENST00000444408 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
AP1S3-207ENST00000444408 AKAP12Q02952 1782 aa23.93■■□□□ 1.42
AP1S3-207ENST00000444408 CDK12Q9NYV4 1490 aaPredicted RBP23.93■■□□□ 1.42
AP1S3-207ENST00000444408 A0A1W2PP64 1363 aa23.92■■□□□ 1.42
AP1S3-207ENST00000444408 CDCA8Q53HL2 280 aa23.91■■□□□ 1.42
AP1S3-207ENST00000444408 ZNF692Q9BU19 519 aaPredicted RBP23.91■■□□□ 1.42
AP1S3-207ENST00000444408 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
AP1S3-207ENST00000444408 ABTB2Q8N961 1025 aa23.9■■□□□ 1.42
AP1S3-207ENST00000444408 HDGFL2Q7Z4V5 671 aaPredicted RBP23.89■■□□□ 1.41
AP1S3-207ENST00000444408 AFF2P51816 1311 aa23.88■■□□□ 1.41
AP1S3-207ENST00000444408 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
AP1S3-207ENST00000444408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.88■■□□□ 1.41
AP1S3-207ENST00000444408 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
AP1S3-207ENST00000444408 MYOM1P52179 1685 aa23.88■■□□□ 1.41
AP1S3-207ENST00000444408 MON2Q7Z3U7 1717 aa23.87■■□□□ 1.41
AP1S3-207ENST00000444408 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
AP1S3-207ENST00000444408 ZRANB1Q9UGI0 708 aa23.87■■□□□ 1.41
AP1S3-207ENST00000444408 NINLQ9Y2I6 1382 aa23.87■■□□□ 1.41
AP1S3-207ENST00000444408 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
AP1S3-207ENST00000444408 BRD4O60885 1362 aaPredicted RBP23.86■■□□□ 1.41
AP1S3-207ENST00000444408 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
AP1S3-207ENST00000444408 ANKRD36BQ8N2N9 1353 aa23.85■■□□□ 1.41
AP1S3-207ENST00000444408 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
AP1S3-207ENST00000444408 CRYBG1Q9Y4K1 1723 aa23.84■■□□□ 1.41
AP1S3-207ENST00000444408 NME9Q86XW9 330 aa23.84■■□□□ 1.41
AP1S3-207ENST00000444408 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
AP1S3-207ENST00000444408 NLRP6P59044 892 aa23.83■■□□□ 1.41
AP1S3-207ENST00000444408 EDC4Q6P2E9 1401 aaKnown RBP23.83■■□□□ 1.4
AP1S3-207ENST00000444408 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
AP1S3-207ENST00000444408 USP19O94966 1318 aa23.82■■□□□ 1.4
AP1S3-207ENST00000444408 NGLY1Q96IV0 654 aa23.81■■□□□ 1.4
AP1S3-207ENST00000444408 TTC21AQ8NDW8 1320 aa23.81■■□□□ 1.4
AP1S3-207ENST00000444408 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
AP1S3-207ENST00000444408 NLRP13Q86W25 1043 aa23.8■■□□□ 1.4
AP1S3-207ENST00000444408 QTRT2Q9H974 415 aaKnown RBP23.8■■□□□ 1.4
AP1S3-207ENST00000444408 PHRF1Q9P1Y6 1649 aaKnown RBP23.8■■□□□ 1.4
AP1S3-207ENST00000444408 ZC3H6P61129 1189 aaKnown RBP23.78■■□□□ 1.4
AP1S3-207ENST00000444408 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
AP1S3-207ENST00000444408 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
AP1S3-207ENST00000444408 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
AP1S3-207ENST00000444408 WASHC2AQ641Q2 1341 aa23.77■■□□□ 1.4
AP1S3-207ENST00000444408 SOX12O15370 315 aa23.76■■□□□ 1.39
AP1S3-207ENST00000444408 GCP02774 474 aa23.76■■□□□ 1.39
AP1S3-207ENST00000444408 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
AP1S3-207ENST00000444408 KIAA0232Q92628 1395 aa23.75■■□□□ 1.39
AP1S3-207ENST00000444408 RGS12O14924 1447 aa23.75■■□□□ 1.39
AP1S3-207ENST00000444408 SLIT3O75094 1523 aa23.74■■□□□ 1.39
AP1S3-207ENST00000444408 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
AP1S3-207ENST00000444408 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
AP1S3-207ENST00000444408 PANK3Q9H999 370 aa23.74■■□□□ 1.39
AP1S3-207ENST00000444408 USP31Q70CQ4 1352 aa23.74■■□□□ 1.39
AP1S3-207ENST00000444408 NSD3Q9BZ95 1437 aa23.74■■□□□ 1.39
AP1S3-207ENST00000444408 SLIT2O94813 1529 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 BCL9LQ86UU0 1499 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 ZBTB7CA1YPR0 619 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 FYB1O15117 783 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 USP21Q9UK80 565 aa23.71■■□□□ 1.39
AP1S3-207ENST00000444408 OVOS2A0A0J9YW53 1432 aa23.7■■□□□ 1.38
AP1S3-207ENST00000444408 OVOS2Q6IE36 1432 aa23.7■■□□□ 1.38
AP1S3-207ENST00000444408 PLCH1Q4KWH8 1693 aa23.68■■□□□ 1.38
AP1S3-207ENST00000444408 FBLN1P23142 703 aa23.68■■□□□ 1.38
AP1S3-207ENST00000444408 BTG4Q9NY30 223 aa23.67■■□□□ 1.38
AP1S3-207ENST00000444408 NFAT5O94916 1531 aa23.67■■□□□ 1.38
AP1S3-207ENST00000444408 USP54Q70EL1 1684 aa23.67■■□□□ 1.38
AP1S3-207ENST00000444408 CPDO75976 1380 aa23.66■■□□□ 1.38
AP1S3-207ENST00000444408 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
AP1S3-207ENST00000444408 UNC5CLQ8IV45 518 aa23.65■■□□□ 1.38
AP1S3-207ENST00000444408 COG3Q96JB2 828 aa23.65■■□□□ 1.38
AP1S3-207ENST00000444408 ARHGEF25Q86VW2 580 aa23.64■■□□□ 1.37
AP1S3-207ENST00000444408 KCNH5Q8NCM2 988 aa23.64■■□□□ 1.37
AP1S3-207ENST00000444408 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
AP1S3-207ENST00000444408 ATRNO75882 1429 aa23.63■■□□□ 1.37
AP1S3-207ENST00000444408 CAMTA1Q9Y6Y1 1673 aa23.62■■□□□ 1.37
AP1S3-207ENST00000444408 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
AP1S3-207ENST00000444408 KIF20BQ96Q89 1820 aa23.61■■□□□ 1.37
AP1S3-207ENST00000444408 LMO7Q8WWI1 1683 aa23.6■■□□□ 1.37
AP1S3-207ENST00000444408 NRAPQ86VF7 1730 aa23.6■■□□□ 1.37
AP1S3-207ENST00000444408 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
AP1S3-207ENST00000444408 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
AP1S3-207ENST00000444408 STRN4Q9NRL3 753 aa23.59■■□□□ 1.37
AP1S3-207ENST00000444408 AATKQ6ZMQ8 1374 aa23.58■■□□□ 1.37
AP1S3-207ENST00000444408 COL18A1P39060 1754 aa23.57■■□□□ 1.36
AP1S3-207ENST00000444408 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.57■■□□□ 1.36
AP1S3-207ENST00000444408 PER1O15534 1290 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms