RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 PDE3BQ13370 1112 aa22.25■■□□□ 1.15
SYNCRIP-203ENST00000444272 GPR162Q16538 588 aa22.24■■□□□ 1.15
SYNCRIP-203ENST00000444272 RGPD3A6NKT7 1758 aaPredicted RBP22.23■■□□□ 1.15
SYNCRIP-203ENST00000444272 RGPD4Q7Z3J3 1758 aa22.23■■□□□ 1.15
SYNCRIP-203ENST00000444272 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
SYNCRIP-203ENST00000444272 CLTCL1P53675 1640 aa22.21■■□□□ 1.15
SYNCRIP-203ENST00000444272 WAPLQ7Z5K2 1190 aa22.21■■□□□ 1.15
SYNCRIP-203ENST00000444272 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
SYNCRIP-203ENST00000444272 SLC34A2O95436 690 aa22.19■■□□□ 1.14
SYNCRIP-203ENST00000444272 NUP155O75694 1391 aa22.19■■□□□ 1.14
SYNCRIP-203ENST00000444272 KIF1BO60333 1816 aa22.19■■□□□ 1.14
SYNCRIP-203ENST00000444272 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
SYNCRIP-203ENST00000444272 TECPR2O15040 1411 aa22.18■■□□□ 1.14
SYNCRIP-203ENST00000444272 VGFO15240 615 aaPredicted RBP22.18■■□□□ 1.14
SYNCRIP-203ENST00000444272 BCL11BQ9C0K0 894 aaPredicted RBP22.17■■□□□ 1.14
SYNCRIP-203ENST00000444272 USP35Q9P2H5 1018 aa22.17■■□□□ 1.14
SYNCRIP-203ENST00000444272 SGIP1Q9BQI5 828 aa22.16■■□□□ 1.14
SYNCRIP-203ENST00000444272 PLEKHH1Q9ULM0 1364 aa22.15■■□□□ 1.14
SYNCRIP-203ENST00000444272 IFT172Q9UG01 1749 aa22.15■■□□□ 1.14
SYNCRIP-203ENST00000444272 STRN4Q9NRL3 753 aa22.15■■□□□ 1.14
SYNCRIP-203ENST00000444272 ARXQ96QS3 562 aa22.14■■□□□ 1.13
SYNCRIP-203ENST00000444272 MTFR1LQ9H019 292 aa22.14■■□□□ 1.13
SYNCRIP-203ENST00000444272 PRDM11Q9NQV5 511 aa22.14■■□□□ 1.13
SYNCRIP-203ENST00000444272 MAP3K5Q99683 1374 aa22.13■■□□□ 1.13
SYNCRIP-203ENST00000444272 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
SYNCRIP-203ENST00000444272 STK26Q9P289 416 aa22.13■■□□□ 1.13
SYNCRIP-203ENST00000444272 TRPM3Q9HCF6 1732 aaPredicted RBP22.12■■□□□ 1.13
SYNCRIP-203ENST00000444272 CRYBG1Q9Y4K1 1723 aa22.12■■□□□ 1.13
SYNCRIP-203ENST00000444272 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
SYNCRIP-203ENST00000444272 PLSCR1O15162 318 aa22.12■■□□□ 1.13
SYNCRIP-203ENST00000444272 COL13A1Q5TAT6 717 aaPredicted RBP22.1■■□□□ 1.13
SYNCRIP-203ENST00000444272 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
SYNCRIP-203ENST00000444272 ATP10DQ9P241 1426 aa22.1■■□□□ 1.13
SYNCRIP-203ENST00000444272 PRELPP51888 382 aa22.09■■□□□ 1.13
SYNCRIP-203ENST00000444272 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.13
SYNCRIP-203ENST00000444272 SBF2Q86WG5 1849 aa22.08■■□□□ 1.12
SYNCRIP-203ENST00000444272 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
SYNCRIP-203ENST00000444272 STK32BQ9NY57 414 aa22.07■■□□□ 1.12
SYNCRIP-203ENST00000444272 CHRNA2Q15822 529 aa22.06■■□□□ 1.12
SYNCRIP-203ENST00000444272 PROM2Q8N271 834 aa22.06■■□□□ 1.12
SYNCRIP-203ENST00000444272 PMFBP1Q8TBY8 1022 aa22.06■■□□□ 1.12
SYNCRIP-203ENST00000444272 GPBP1L1Q9HC44 474 aaPredicted RBP22.06■■□□□ 1.12
SYNCRIP-203ENST00000444272 PPLO60437 1756 aa22.06■■□□□ 1.12
SYNCRIP-203ENST00000444272 KIAA0232Q92628 1395 aa22.04■■□□□ 1.12
SYNCRIP-203ENST00000444272 PEAK1Q9H792 1746 aa22.04■■□□□ 1.12
SYNCRIP-203ENST00000444272 SLC15A2Q16348 729 aa22.04■■□□□ 1.12
SYNCRIP-203ENST00000444272 KLHL34Q8N239 644 aa22.04■■□□□ 1.12
SYNCRIP-203ENST00000444272 PARP4Q9UKK3 1724 aaKnown RBP22.03■■□□□ 1.12
SYNCRIP-203ENST00000444272 OVOS2A0A0G2JMS6 1433 aa22.03■■□□□ 1.12
SYNCRIP-203ENST00000444272 OVOS2A0A0J9YW53 1432 aa22.03■■□□□ 1.12
SYNCRIP-203ENST00000444272 OVOS2Q6IE36 1432 aa22.03■■□□□ 1.12
SYNCRIP-203ENST00000444272 TNS4Q8IZW8 715 aa22.02■■□□□ 1.12
SYNCRIP-203ENST00000444272 SSH2Q76I76 1423 aa22.01■■□□□ 1.11
SYNCRIP-203ENST00000444272 C11orf95C9JLR9 678 aaPredicted RBP22.01■■□□□ 1.11
SYNCRIP-203ENST00000444272 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
SYNCRIP-203ENST00000444272 TCP11L2Q8N4U5 519 aa22■■□□□ 1.11
SYNCRIP-203ENST00000444272 EVA1CP58658 441 aa21.99■■□□□ 1.11
SYNCRIP-203ENST00000444272 ABCC11Q96J66 1382 aa21.99■■□□□ 1.11
SYNCRIP-203ENST00000444272 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
SYNCRIP-203ENST00000444272 RPGRIP1LQ68CZ1 1315 aa21.98■■□□□ 1.11
SYNCRIP-203ENST00000444272 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
SYNCRIP-203ENST00000444272 LARP1Q6PKG0 1096 aaKnown RBP21.96■■□□□ 1.11
SYNCRIP-203ENST00000444272 DNAJC5GQ8N7S2 189 aa21.96■■□□□ 1.11
SYNCRIP-203ENST00000444272 PHRF1Q9P1Y6 1649 aaKnown RBP21.95■■□□□ 1.1
SYNCRIP-203ENST00000444272 APLP1P51693 650 aa21.95■■□□□ 1.1
SYNCRIP-203ENST00000444272 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
SYNCRIP-203ENST00000444272 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
SYNCRIP-203ENST00000444272 PCNTO95613 3336 aa21.94■■□□□ 1.1
SYNCRIP-203ENST00000444272 ZC3H6P61129 1189 aaKnown RBP21.93■■□□□ 1.1
SYNCRIP-203ENST00000444272 GRIN3BO60391 1043 aa21.92■■□□□ 1.1
SYNCRIP-203ENST00000444272 YBX3P16989 372 aaKnown RBP eCLIP21.92■■□□□ 1.1
SYNCRIP-203ENST00000444272 NLGN2Q8NFZ4 835 aa21.92■■□□□ 1.1
SYNCRIP-203ENST00000444272 ATP7BP35670 1465 aa21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 ROCK1Q13464 1354 aa21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 PAK3O75914 559 aaPredicted RBP21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 PCDH10Q9P2E7 1040 aa21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 THRAP3Q9Y2W1 955 aaKnown RBP21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 LRRC37A3O60309 1634 aa21.91■■□□□ 1.1
SYNCRIP-203ENST00000444272 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
SYNCRIP-203ENST00000444272 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
SYNCRIP-203ENST00000444272 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
SYNCRIP-203ENST00000444272 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.09
SYNCRIP-203ENST00000444272 YTHDC2Q9H6S0 1430 aaKnown RBP21.89■■□□□ 1.09
SYNCRIP-203ENST00000444272 TOPAZ1Q8N9V7 1692 aa21.88■■□□□ 1.09
SYNCRIP-203ENST00000444272 APLP2Q06481 763 aa21.88■■□□□ 1.09
SYNCRIP-203ENST00000444272 ADCY9O60503 1353 aa21.87■■□□□ 1.09
SYNCRIP-203ENST00000444272 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.097e-11■□□□□ 8.5
SYNCRIP-203ENST00000444272 LMO7Q8WWI1 1683 aa21.84■■□□□ 1.09
SYNCRIP-203ENST00000444272 POLD1P28340 1107 aa21.83■■□□□ 1.09
SYNCRIP-203ENST00000444272 PAPPAQ13219 1627 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 KIF3CO14782 793 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 DDB1Q16531 1140 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 SIRT1Q96EB6 747 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 WDR90Q96KV7 1748 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 AKAP12Q02952 1782 aa21.82■■□□□ 1.08
SYNCRIP-203ENST00000444272 AATKQ6ZMQ8 1374 aa21.8■■□□□ 1.08
SYNCRIP-203ENST00000444272 COL24A1Q17RW2 1714 aa21.8■■□□□ 1.08
SYNCRIP-203ENST00000444272 NUTM2GQ5VZR2 741 aa21.78■■□□□ 1.08
SYNCRIP-203ENST00000444272 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
SYNCRIP-203ENST00000444272 PRAM1Q96QH2 718 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms