RNA–Protein interactions for RNA: ENST00000444179.5

SHC1-208, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-208ENST00000444179 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
SHC1-208ENST00000444179 NBPF8Q3BBV2 869 aa15.77■□□□□ 0.12
SHC1-208ENST00000444179 SEPT12Q8IYM1 358 aa15.77■□□□□ 0.12
SHC1-208ENST00000444179 BTG4Q9NY30 223 aa15.77■□□□□ 0.12
SHC1-208ENST00000444179 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
SHC1-208ENST00000444179 CENPJQ9HC77 1338 aaPredicted RBP15.75■□□□□ 0.11
SHC1-208ENST00000444179 NEUROD1Q13562 356 aa15.75■□□□□ 0.11
SHC1-208ENST00000444179 NUTM2GQ5VZR2 741 aa15.75■□□□□ 0.11
SHC1-208ENST00000444179 CABP2Q9NPB3 220 aa15.75■□□□□ 0.11
SHC1-208ENST00000444179 NWD2Q9ULI1 1742 aa15.74■□□□□ 0.11
SHC1-208ENST00000444179 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
SHC1-208ENST00000444179 TOPAZ1Q8N9V7 1692 aa15.74■□□□□ 0.11
SHC1-208ENST00000444179 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
SHC1-208ENST00000444179 NRAPQ86VF7 1730 aa15.73■□□□□ 0.11
SHC1-208ENST00000444179 KIAA0232Q92628 1395 aa15.72■□□□□ 0.11
SHC1-208ENST00000444179 SRPK2P78362 688 aaKnown RBP15.71■□□□□ 0.11
SHC1-208ENST00000444179 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
SHC1-208ENST00000444179 FAM98CQ17RN3 349 aaKnown RBP15.71■□□□□ 0.11
SHC1-208ENST00000444179 CCDC125Q86Z20 511 aa15.71■□□□□ 0.11
SHC1-208ENST00000444179 COL14A1Q05707 1796 aaKnown RBP15.71■□□□□ 0.11
SHC1-208ENST00000444179 ITSN1Q15811 1721 aa15.71■□□□□ 0.1
SHC1-208ENST00000444179 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.1
SHC1-208ENST00000444179 SPATA31A5Q5VU36 1347 aa15.7■□□□□ 0.1
SHC1-208ENST00000444179 SPATA31A7Q8IWB4 1347 aa15.7■□□□□ 0.1
SHC1-208ENST00000444179 PPIP5K1Q6PFW1 1433 aa15.7■□□□□ 0.1
SHC1-208ENST00000444179 ZC3H6P61129 1189 aaKnown RBP15.7■□□□□ 0.1
SHC1-208ENST00000444179 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
SHC1-208ENST00000444179 KRT27Q7Z3Y8 459 aa15.69■□□□□ 0.1
SHC1-208ENST00000444179 CABP1Q9NZU7 370 aa15.69■□□□□ 0.1
SHC1-208ENST00000444179 DEFB132Q7Z7B7 95 aa15.68■□□□□ 0.1
SHC1-208ENST00000444179 ABTB2Q8N961 1025 aa15.68■□□□□ 0.1
SHC1-208ENST00000444179 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
SHC1-208ENST00000444179 BLMP54132 1417 aaPredicted RBP15.68■□□□□ 0.1
SHC1-208ENST00000444179 USP19O94966 1318 aa15.68■□□□□ 0.1
SHC1-208ENST00000444179 PHRF1Q9P1Y6 1649 aaKnown RBP15.67■□□□□ 0.1
SHC1-208ENST00000444179 QRICH2Q9H0J4 1663 aa15.67■□□□□ 0.1
SHC1-208ENST00000444179 FAM182BQ5T319 152 aa15.66■□□□□ 0.1
SHC1-208ENST00000444179 SPATA31A1Q5TZJ5 1347 aa15.66■□□□□ 0.1
SHC1-208ENST00000444179 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
SHC1-208ENST00000444179 A0A0G2JS52 829 aa15.64■□□□□ 0.09
SHC1-208ENST00000444179 MYT1Q01538 1121 aa15.64■□□□□ 0.09
SHC1-208ENST00000444179 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
SHC1-208ENST00000444179 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
SHC1-208ENST00000444179 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
SHC1-208ENST00000444179 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
SHC1-208ENST00000444179 CPDO75976 1380 aa15.63■□□□□ 0.09
SHC1-208ENST00000444179 USP6P35125 1406 aa15.63■□□□□ 0.09
SHC1-208ENST00000444179 GCP02774 474 aa15.63■□□□□ 0.09
SHC1-208ENST00000444179 EVC2Q86UK5 1308 aa15.63■□□□□ 0.09
SHC1-208ENST00000444179 LARP1Q6PKG0 1096 aaKnown RBP15.62■□□□□ 0.09
SHC1-208ENST00000444179 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
SHC1-208ENST00000444179 THSD7AQ9UPZ6 1657 aa15.62■□□□□ 0.09
SHC1-208ENST00000444179 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
SHC1-208ENST00000444179 BRD4O60885 1362 aaPredicted RBP15.61■□□□□ 0.09
SHC1-208ENST00000444179 LMO7Q8WWI1 1683 aa15.6■□□□□ 0.09
SHC1-208ENST00000444179 NLRP6P59044 892 aa15.59■□□□□ 0.09
SHC1-208ENST00000444179 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
SHC1-208ENST00000444179 EVA1CP58658 441 aa15.58■□□□□ 0.08
SHC1-208ENST00000444179 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
SHC1-208ENST00000444179 BARGINQ6ZT62 677 aa15.57■□□□□ 0.08
SHC1-208ENST00000444179 CARD11Q9BXL7 1154 aa15.57■□□□□ 0.08
SHC1-208ENST00000444179 TTC21BQ7Z4L5 1316 aa15.57■□□□□ 0.08
SHC1-208ENST00000444179 CPSF1Q10570 1443 aaKnown RBP15.57■□□□□ 0.08
SHC1-208ENST00000444179 SLIT3O75094 1523 aa15.57■□□□□ 0.08
SHC1-208ENST00000444179 AXIN2Q9Y2T1 843 aa15.56■□□□□ 0.08
SHC1-208ENST00000444179 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
SHC1-208ENST00000444179 COL5A2P05997 1499 aaPredicted RBP15.55■□□□□ 0.08
SHC1-208ENST00000444179 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
SHC1-208ENST00000444179 ZNF692Q9BU19 519 aaPredicted RBP15.55■□□□□ 0.08
SHC1-208ENST00000444179 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
SHC1-208ENST00000444179 SBNO2Q9Y2G9 1366 aa15.54■□□□□ 0.08
SHC1-208ENST00000444179 ZBTB7CA1YPR0 619 aa15.54■□□□□ 0.08
SHC1-208ENST00000444179 TCP11L2Q8N4U5 519 aa15.54■□□□□ 0.08
SHC1-208ENST00000444179 CD163L1Q9NR16 1453 aa15.53■□□□□ 0.08
SHC1-208ENST00000444179 TONSLQ96HA7 1378 aa15.53■□□□□ 0.08
SHC1-208ENST00000444179 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
SHC1-208ENST00000444179 BAG6P46379 1132 aa15.52■□□□□ 0.08
SHC1-208ENST00000444179 ARHGEF25Q86VW2 580 aa15.52■□□□□ 0.08
SHC1-208ENST00000444179 KTN1Q86UP2 1357 aaKnown RBP15.51■□□□□ 0.07
SHC1-208ENST00000444179 TRIM37O94972 964 aa15.51■□□□□ 0.07
SHC1-208ENST00000444179 FAM196AQ6ZSG2 479 aa15.51■□□□□ 0.07
SHC1-208ENST00000444179 COL18A1P39060 1754 aa15.51■□□□□ 0.07
SHC1-208ENST00000444179 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
SHC1-208ENST00000444179 PSDA5PKW4 1024 aaPredicted RBP15.5■□□□□ 0.07
SHC1-208ENST00000444179 SOX12O15370 315 aa15.5■□□□□ 0.07
SHC1-208ENST00000444179 SLC12A5Q9H2X9 1139 aa15.5■□□□□ 0.07
SHC1-208ENST00000444179 THRAP3Q9Y2W1 955 aaKnown RBP15.5■□□□□ 0.07
SHC1-208ENST00000444179 DISP2A7MBM2 1401 aa15.5■□□□□ 0.07
SHC1-208ENST00000444179 CRB1P82279 1406 aa15.5■□□□□ 0.07
SHC1-208ENST00000444179 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
SHC1-208ENST00000444179 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
SHC1-208ENST00000444179 EZH2Q15910 746 aaKnown RBP15.49■□□□□ 0.07
SHC1-208ENST00000444179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHC1-208ENST00000444179 CAMKK2Q96RR4 588 aa15.49■□□□□ 0.07
SHC1-208ENST00000444179 TESK2Q96S53 571 aa15.49■□□□□ 0.07
SHC1-208ENST00000444179 TNS1Q9HBL0 1735 aaKnown RBP15.48■□□□□ 0.07
SHC1-208ENST00000444179 NME9Q86XW9 330 aa15.48■□□□□ 0.07
SHC1-208ENST00000444179 NFAT5O94916 1531 aa15.48■□□□□ 0.07
SHC1-208ENST00000444179 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
SHC1-208ENST00000444179 KCNH5Q8NCM2 988 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms