RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 STAC3Q96MF2 364 aa11.31□□□□□ -0.6
EPHA4-209ENST00000443796 RABGEF1Q9UJ41 708 aa11.31□□□□□ -0.6
EPHA4-209ENST00000443796 TROQ12816 1431 aaPredicted RBP11.31□□□□□ -0.6
EPHA4-209ENST00000443796 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
EPHA4-209ENST00000443796 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
EPHA4-209ENST00000443796 TATDN2Q93075 761 aa11.3□□□□□ -0.6
EPHA4-209ENST00000443796 CCDC102AQ96A19 550 aa11.3□□□□□ -0.6
EPHA4-209ENST00000443796 ADGRG1Q9Y653 693 aa11.3□□□□□ -0.6
EPHA4-209ENST00000443796 DNMT1P26358 1616 aaKnown RBP11.29□□□□□ -0.6
EPHA4-209ENST00000443796 SMAPO00193 183 aa11.29□□□□□ -0.6
EPHA4-209ENST00000443796 OATP04181 439 aa11.29□□□□□ -0.6
EPHA4-209ENST00000443796 RBM46Q8TBY0 533 aaKnown RBP11.29□□□□□ -0.6
EPHA4-209ENST00000443796 ATP1B4Q9UN42 357 aaPredicted RBP11.29□□□□□ -0.6
EPHA4-209ENST00000443796 CDK11AQ9UQ88 783 aaPredicted RBP11.29□□□□□ -0.6
EPHA4-209ENST00000443796 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
EPHA4-209ENST00000443796 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
EPHA4-209ENST00000443796 A2ML1A8K2U0 1454 aa11.27□□□□□ -0.6
EPHA4-209ENST00000443796 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
EPHA4-209ENST00000443796 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.61
EPHA4-209ENST00000443796 PREX2Q70Z35 1606 aa11.27□□□□□ -0.61
EPHA4-209ENST00000443796 CLIP1P30622 1438 aa11.26□□□□□ -0.61
EPHA4-209ENST00000443796 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
EPHA4-209ENST00000443796 C3orf80F5H4A9 247 aa11.26□□□□□ -0.61
EPHA4-209ENST00000443796 SRCAPQ6ZRS2 3230 aa11.25□□□□□ -0.61
EPHA4-209ENST00000443796 MRPL50Q8N5N7 158 aaKnown RBP11.25□□□□□ -0.61
EPHA4-209ENST00000443796 PLXNC1O60486 1568 aa11.24□□□□□ -0.61
EPHA4-209ENST00000443796 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
EPHA4-209ENST00000443796 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
EPHA4-209ENST00000443796 METTL3Q86U44 580 aaKnown RBP11.24□□□□□ -0.61
EPHA4-209ENST00000443796 PXYLP1Q8TE99 480 aa11.24□□□□□ -0.61
EPHA4-209ENST00000443796 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
EPHA4-209ENST00000443796 TRIM66O15016 1216 aa11.23□□□□□ -0.61
EPHA4-209ENST00000443796 EYA1Q99502 592 aa11.23□□□□□ -0.61
EPHA4-209ENST00000443796 GOLGA8CPA6NN73 597 aa11.22□□□□□ -0.61
EPHA4-209ENST00000443796 BHMG1C9JSJ3 638 aaPredicted RBP11.22□□□□□ -0.61
EPHA4-209ENST00000443796 HRO43593 1189 aa11.22□□□□□ -0.61
EPHA4-209ENST00000443796 SPAG9O60271 1321 aaKnown RBP11.22□□□□□ -0.61
EPHA4-209ENST00000443796 GGT6Q6P531 493 aa11.22□□□□□ -0.61
EPHA4-209ENST00000443796 PCDH10Q9P2E7 1040 aa11.22□□□□□ -0.61
EPHA4-209ENST00000443796 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
EPHA4-209ENST00000443796 LRRC7Q96NW7 1537 aa11.21□□□□□ -0.61
EPHA4-209ENST00000443796 A2MP01023 1474 aa11.21□□□□□ -0.61
EPHA4-209ENST00000443796 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
EPHA4-209ENST00000443796 NLRP7Q8WX94 980 aa11.21□□□□□ -0.61
EPHA4-209ENST00000443796 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.62
EPHA4-209ENST00000443796 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
EPHA4-209ENST00000443796 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
EPHA4-209ENST00000443796 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
EPHA4-209ENST00000443796 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
EPHA4-209ENST00000443796 RNF17Q9BXT8 1623 aaKnown RBP11.2□□□□□ -0.62
EPHA4-209ENST00000443796 ATP7AQ04656 1500 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
EPHA4-209ENST00000443796 DNAJB2P25686 324 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
EPHA4-209ENST00000443796 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 MED14O60244 1454 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 ARHGAP35Q9NRY4 1499 aa11.19□□□□□ -0.62
EPHA4-209ENST00000443796 NPHP4O75161 1426 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 TNRQ92752 1358 aa11.18□□□□□ -0.62
EPHA4-209ENST00000443796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 FBXO31Q5XUX0 539 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 INO80Q9ULG1 1556 aaPredicted RBP11.18□□□□□ -0.62
EPHA4-209ENST00000443796 EEA1Q15075 1411 aa11.18□□□□□ -0.62
EPHA4-209ENST00000443796 DEPDC5O75140 1603 aa11.17□□□□□ -0.62
EPHA4-209ENST00000443796 PDE4DQ08499 809 aa11.17□□□□□ -0.62
EPHA4-209ENST00000443796 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
EPHA4-209ENST00000443796 IQGAP1P46940 1657 aa11.16□□□□□ -0.62
EPHA4-209ENST00000443796 SYNMO15061 1565 aa11.16□□□□□ -0.62
EPHA4-209ENST00000443796 AMHR2Q16671 573 aa11.15□□□□□ -0.62
EPHA4-209ENST00000443796 CLCN1P35523 988 aa11.14□□□□□ -0.63
EPHA4-209ENST00000443796 NEUROD2Q15784 382 aa11.14□□□□□ -0.63
EPHA4-209ENST00000443796 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
EPHA4-209ENST00000443796 PZPP20742 1482 aa11.13□□□□□ -0.63
EPHA4-209ENST00000443796 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
EPHA4-209ENST00000443796 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
EPHA4-209ENST00000443796 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
EPHA4-209ENST00000443796 ADGBQ8N7X0 1667 aa11.13□□□□□ -0.63
EPHA4-209ENST00000443796 GPATCH8Q9UKJ3 1502 aaKnown RBP11.13□□□□□ -0.63
EPHA4-209ENST00000443796 UGGT1Q9NYU2 1555 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 KIAA1107Q9UPP5 1409 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 RNF40O75150 1001 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 WNT2BQ93097 391 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
EPHA4-209ENST00000443796 DAXXQ9UER7 740 aaPredicted RBP11.12□□□□□ -0.63
EPHA4-209ENST00000443796 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
EPHA4-209ENST00000443796 MIA2Q96PC5 1412 aa11.11□□□□□ -0.63
EPHA4-209ENST00000443796 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
EPHA4-209ENST00000443796 SLC4A3P48751 1232 aa11.11□□□□□ -0.63
EPHA4-209ENST00000443796 NLRP1Q9C000 1473 aa11.11□□□□□ -0.63
EPHA4-209ENST00000443796 FAM135BQ49AJ0 1406 aa11.1□□□□□ -0.63
EPHA4-209ENST00000443796 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
EPHA4-209ENST00000443796 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
EPHA4-209ENST00000443796 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
EPHA4-209ENST00000443796 CCDC18Q5T9S5 1454 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms