RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
SLC48A1-202ENST00000442892 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
SLC48A1-202ENST00000442892 EIF4G2P78344 907 aaKnown RBP eCLIP17.08■□□□□ 0.32
SLC48A1-202ENST00000442892 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
SLC48A1-202ENST00000442892 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
SLC48A1-202ENST00000442892 NGLY1Q96IV0 654 aa17.06■□□□□ 0.32
SLC48A1-202ENST00000442892 ABTB2Q8N961 1025 aa17.05■□□□□ 0.32
SLC48A1-202ENST00000442892 USP6P35125 1406 aa17.04■□□□□ 0.32
SLC48A1-202ENST00000442892 MON2Q7Z3U7 1717 aa17.04■□□□□ 0.32
SLC48A1-202ENST00000442892 KTN1Q86UP2 1357 aaKnown RBP17.04■□□□□ 0.32
SLC48A1-202ENST00000442892 AFF2P51816 1311 aa17.04■□□□□ 0.32
SLC48A1-202ENST00000442892 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
SLC48A1-202ENST00000442892 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
SLC48A1-202ENST00000442892 PHRF1Q9P1Y6 1649 aaKnown RBP17.03■□□□□ 0.32
SLC48A1-202ENST00000442892 CRYBG1Q9Y4K1 1723 aa17.02■□□□□ 0.32
SLC48A1-202ENST00000442892 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
SLC48A1-202ENST00000442892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.01■□□□□ 0.31
SLC48A1-202ENST00000442892 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
SLC48A1-202ENST00000442892 RGS17Q9UGC6 210 aaPredicted RBP17.01■□□□□ 0.31
SLC48A1-202ENST00000442892 NRKQ7Z2Y5 1582 aa17.01■□□□□ 0.31
SLC48A1-202ENST00000442892 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
SLC48A1-202ENST00000442892 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
SLC48A1-202ENST00000442892 ZNF772Q68DY9 489 aaPredicted RBP17■□□□□ 0.31
SLC48A1-202ENST00000442892 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
SLC48A1-202ENST00000442892 PLCH1Q4KWH8 1693 aa17■□□□□ 0.31
SLC48A1-202ENST00000442892 ILDR2Q71H61 639 aa16.99■□□□□ 0.31
SLC48A1-202ENST00000442892 MYOM1P52179 1685 aa16.99■□□□□ 0.31
SLC48A1-202ENST00000442892 A0A1W2PP64 1363 aa16.99■□□□□ 0.31
SLC48A1-202ENST00000442892 TTC21BQ7Z4L5 1316 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 CPSF1Q10570 1443 aaKnown RBP16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 SOX12O15370 315 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 NLRP6P59044 892 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 USP21Q9UK80 565 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 NINLQ9Y2I6 1382 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
SLC48A1-202ENST00000442892 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
SLC48A1-202ENST00000442892 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
SLC48A1-202ENST00000442892 PRDM11Q9NQV5 511 aa16.95■□□□□ 0.3
SLC48A1-202ENST00000442892 TTC21AQ8NDW8 1320 aa16.95■□□□□ 0.3
SLC48A1-202ENST00000442892 COL14A1Q05707 1796 aaKnown RBP16.94■□□□□ 0.3
SLC48A1-202ENST00000442892 NME9Q86XW9 330 aa16.94■□□□□ 0.3
SLC48A1-202ENST00000442892 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
SLC48A1-202ENST00000442892 SSH2Q76I76 1423 aa16.94■□□□□ 0.3
SLC48A1-202ENST00000442892 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 KIAA0232Q92628 1395 aa16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
SLC48A1-202ENST00000442892 KIF20BQ96Q89 1820 aa16.92■□□□□ 0.3
SLC48A1-202ENST00000442892 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
SLC48A1-202ENST00000442892 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.92■□□□□ 0.3
SLC48A1-202ENST00000442892 USP19O94966 1318 aa16.92■□□□□ 0.3
SLC48A1-202ENST00000442892 RXRBP28702 533 aa16.91■□□□□ 0.3
SLC48A1-202ENST00000442892 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
SLC48A1-202ENST00000442892 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
SLC48A1-202ENST00000442892 GCP02774 474 aa16.9■□□□□ 0.3
SLC48A1-202ENST00000442892 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
SLC48A1-202ENST00000442892 SLIT2O94813 1529 aa16.9■□□□□ 0.3
SLC48A1-202ENST00000442892 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
SLC48A1-202ENST00000442892 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
SLC48A1-202ENST00000442892 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
SLC48A1-202ENST00000442892 SLIT3O75094 1523 aa16.89■□□□□ 0.29
SLC48A1-202ENST00000442892 C11orf95C9JLR9 678 aaPredicted RBP16.88■□□□□ 0.29
SLC48A1-202ENST00000442892 STRN4Q9NRL3 753 aa16.88■□□□□ 0.29
SLC48A1-202ENST00000442892 ATRNO75882 1429 aa16.87■□□□□ 0.29
SLC48A1-202ENST00000442892 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
SLC48A1-202ENST00000442892 LTN1O94822 1766 aa16.87■□□□□ 0.29
SLC48A1-202ENST00000442892 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
SLC48A1-202ENST00000442892 USP54Q70EL1 1684 aa16.86■□□□□ 0.29
SLC48A1-202ENST00000442892 RBM6P78332 1123 aaKnown RBP16.86■□□□□ 0.29
SLC48A1-202ENST00000442892 EVA1CP58658 441 aa16.85■□□□□ 0.29
SLC48A1-202ENST00000442892 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
SLC48A1-202ENST00000442892 COG3Q96JB2 828 aa16.85■□□□□ 0.29
SLC48A1-202ENST00000442892 GGNBP2Q9H3C7 697 aa16.85■□□□□ 0.29
SLC48A1-202ENST00000442892 A0A0G2JS52 829 aa16.84■□□□□ 0.29
SLC48A1-202ENST00000442892 MYT1Q01538 1121 aa16.84■□□□□ 0.29
SLC48A1-202ENST00000442892 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
SLC48A1-202ENST00000442892 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
SLC48A1-202ENST00000442892 CPDO75976 1380 aa16.83■□□□□ 0.28
SLC48A1-202ENST00000442892 NFAT5O94916 1531 aa16.83■□□□□ 0.28
SLC48A1-202ENST00000442892 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
SLC48A1-202ENST00000442892 USP31Q70CQ4 1352 aa16.83■□□□□ 0.28
SLC48A1-202ENST00000442892 LMO7Q8WWI1 1683 aa16.82■□□□□ 0.28
SLC48A1-202ENST00000442892 GLI3P10071 1580 aa16.82■□□□□ 0.28
SLC48A1-202ENST00000442892 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
SLC48A1-202ENST00000442892 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
SLC48A1-202ENST00000442892 PANK3Q9H999 370 aa16.82■□□□□ 0.28
SLC48A1-202ENST00000442892 CAMTA1Q9Y6Y1 1673 aa16.81■□□□□ 0.28
SLC48A1-202ENST00000442892 RGS12O14924 1447 aa16.81■□□□□ 0.28
SLC48A1-202ENST00000442892 VPS72Q15906 364 aa16.81■□□□□ 0.28
SLC48A1-202ENST00000442892 USP35Q9P2H5 1018 aa16.81■□□□□ 0.28
SLC48A1-202ENST00000442892 COL18A1P39060 1754 aa16.79■□□□□ 0.28
SLC48A1-202ENST00000442892 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
SLC48A1-202ENST00000442892 FYB1O15117 783 aa16.79■□□□□ 0.28
SLC48A1-202ENST00000442892 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms