RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 PRDM11Q9NQV5 511 aa14.75□□□□□ -0.05
HDLBP-219ENST00000442714 ADGRB2O60241 1585 aa14.74□□□□□ -0.05
HDLBP-219ENST00000442714 TULP4Q9NRJ4 1543 aa14.74□□□□□ -0.05
HDLBP-219ENST00000442714 RGPD8O14715 1765 aaPredicted RBP14.74□□□□□ -0.05
HDLBP-219ENST00000442714 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
HDLBP-219ENST00000442714 ZC3H6P61129 1189 aaKnown RBP14.73□□□□□ -0.05
HDLBP-219ENST00000442714 CHRNA2Q15822 529 aa14.73□□□□□ -0.05
HDLBP-219ENST00000442714 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
HDLBP-219ENST00000442714 POLR3AO14802 1390 aaPredicted RBP14.73□□□□□ -0.05
HDLBP-219ENST00000442714 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.72□□□□□ -0.05
HDLBP-219ENST00000442714 A0A0G2JS52 829 aa14.72□□□□□ -0.05
HDLBP-219ENST00000442714 MYT1Q01538 1121 aa14.72□□□□□ -0.05
HDLBP-219ENST00000442714 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
HDLBP-219ENST00000442714 SPATA31A1Q5TZJ5 1347 aa14.71□□□□□ -0.05
HDLBP-219ENST00000442714 ABTB2Q8N961 1025 aa14.71□□□□□ -0.05
HDLBP-219ENST00000442714 KIAA0232Q92628 1395 aa14.71□□□□□ -0.06
HDLBP-219ENST00000442714 L3MBTL2Q969R5 705 aa14.7□□□□□ -0.06
HDLBP-219ENST00000442714 BAG6P46379 1132 aa14.69□□□□□ -0.06
HDLBP-219ENST00000442714 EVA1CP58658 441 aa14.69□□□□□ -0.06
HDLBP-219ENST00000442714 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
HDLBP-219ENST00000442714 STRN4Q9NRL3 753 aa14.69□□□□□ -0.06
HDLBP-219ENST00000442714 ATP7BP35670 1465 aa14.69□□□□□ -0.06
HDLBP-219ENST00000442714 GCP02774 474 aa14.68□□□□□ -0.06
HDLBP-219ENST00000442714 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
HDLBP-219ENST00000442714 EN1Q05925 392 aaPredicted RBP14.68□□□□□ -0.06
HDLBP-219ENST00000442714 CABP1Q9NZU7 370 aa14.68□□□□□ -0.06
HDLBP-219ENST00000442714 CENPJQ9HC77 1338 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-219ENST00000442714 TRPM3Q9HCF6 1732 aaPredicted RBP14.67□□□□□ -0.06
HDLBP-219ENST00000442714 FAM196AQ6ZSG2 479 aa14.67□□□□□ -0.06
HDLBP-219ENST00000442714 BARGINQ6ZT62 677 aa14.67□□□□□ -0.06
HDLBP-219ENST00000442714 NLRP13Q86W25 1043 aa14.67□□□□□ -0.06
HDLBP-219ENST00000442714 NWD2Q9ULI1 1742 aa14.66□□□□□ -0.06
HDLBP-219ENST00000442714 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
HDLBP-219ENST00000442714 LARP1Q6PKG0 1096 aaKnown RBP14.65□□□□□ -0.06
HDLBP-219ENST00000442714 CAMKK2Q96RR4 588 aa14.65□□□□□ -0.06
HDLBP-219ENST00000442714 SIN3AQ96ST3 1273 aa14.65□□□□□ -0.06
HDLBP-219ENST00000442714 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
HDLBP-219ENST00000442714 USP19O94966 1318 aa14.65□□□□□ -0.06
HDLBP-219ENST00000442714 CPDO75976 1380 aa14.64□□□□□ -0.07
HDLBP-219ENST00000442714 PSDA5PKW4 1024 aaPredicted RBP14.64□□□□□ -0.07
HDLBP-219ENST00000442714 TRIM37O94972 964 aa14.63□□□□□ -0.07
HDLBP-219ENST00000442714 TCP11L2Q8N4U5 519 aa14.63□□□□□ -0.07
HDLBP-219ENST00000442714 BRWD3Q6RI45 1802 aa14.63□□□□□ -0.07
HDLBP-219ENST00000442714 COL14A1Q05707 1796 aaKnown RBP14.62□□□□□ -0.07
HDLBP-219ENST00000442714 BRD4O60885 1362 aaPredicted RBP14.62□□□□□ -0.07
HDLBP-219ENST00000442714 PLCH1Q4KWH8 1693 aa14.62□□□□□ -0.07
HDLBP-219ENST00000442714 NLRP6P59044 892 aa14.62□□□□□ -0.07
HDLBP-219ENST00000442714 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
HDLBP-219ENST00000442714 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
HDLBP-219ENST00000442714 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
HDLBP-219ENST00000442714 PPIP5K1Q6PFW1 1433 aa14.61□□□□□ -0.07
HDLBP-219ENST00000442714 APBA3O96018 575 aa14.61□□□□□ -0.07
HDLBP-219ENST00000442714 NEUROD1Q13562 356 aa14.6□□□□□ -0.07
HDLBP-219ENST00000442714 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
HDLBP-219ENST00000442714 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
HDLBP-219ENST00000442714 SSH2Q76I76 1423 aa14.59□□□□□ -0.07
HDLBP-219ENST00000442714 R3HDM1Q15032 1099 aaKnown RBP14.59□□□□□ -0.07
HDLBP-219ENST00000442714 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
HDLBP-219ENST00000442714 CAMTA1Q9Y6Y1 1673 aa14.58□□□□□ -0.07
HDLBP-219ENST00000442714 DISP2A7MBM2 1401 aa14.58□□□□□ -0.07
HDLBP-219ENST00000442714 NRAPQ86VF7 1730 aa14.58□□□□□ -0.07
HDLBP-219ENST00000442714 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.07
HDLBP-219ENST00000442714 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
HDLBP-219ENST00000442714 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
HDLBP-219ENST00000442714 ARHGEF25Q86VW2 580 aa14.55□□□□□ -0.08
HDLBP-219ENST00000442714 TTC21BQ7Z4L5 1316 aa14.55□□□□□ -0.08
HDLBP-219ENST00000442714 USP6P35125 1406 aa14.55□□□□□ -0.08
HDLBP-219ENST00000442714 KIAA1210Q9ULL0 1709 aa14.55□□□□□ -0.08
HDLBP-219ENST00000442714 C11orf95C9JLR9 678 aaPredicted RBP14.54□□□□□ -0.08
HDLBP-219ENST00000442714 THSD7AQ9UPZ6 1657 aa14.54□□□□□ -0.08
HDLBP-219ENST00000442714 CRYBG1Q9Y4K1 1723 aa14.54□□□□□ -0.08
HDLBP-219ENST00000442714 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
HDLBP-219ENST00000442714 KCNH5Q8NCM2 988 aa14.53□□□□□ -0.08
HDLBP-219ENST00000442714 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
HDLBP-219ENST00000442714 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
HDLBP-219ENST00000442714 ROCK2O75116 1388 aaKnown RBP14.51□□□□□ -0.09
HDLBP-219ENST00000442714 PLSCR1O15162 318 aa14.51□□□□□ -0.09
HDLBP-219ENST00000442714 NBPF14Q5TI25 921 aa14.51□□□□□ -0.09
HDLBP-219ENST00000442714 COL5A2P05997 1499 aaPredicted RBP14.5□□□□□ -0.09
HDLBP-219ENST00000442714 CRB1P82279 1406 aa14.5□□□□□ -0.09
HDLBP-219ENST00000442714 TTC21AQ8NDW8 1320 aa14.5□□□□□ -0.09
HDLBP-219ENST00000442714 DDB1Q16531 1140 aa14.5□□□□□ -0.09
HDLBP-219ENST00000442714 MARCH10Q8NA82 808 aaPredicted RBP14.5□□□□□ -0.09
HDLBP-219ENST00000442714 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
HDLBP-219ENST00000442714 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
HDLBP-219ENST00000442714 WDR17Q8IZU2 1322 aa14.49□□□□□ -0.09
HDLBP-219ENST00000442714 PTF1AQ7RTS3 328 aa14.49□□□□□ -0.09
HDLBP-219ENST00000442714 CDCA7Q9BWT1 371 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-219ENST00000442714 CARD10Q9BWT7 1032 aa14.49□□□□□ -0.09
HDLBP-219ENST00000442714 CPSF1Q10570 1443 aaKnown RBP14.49□□□□□ -0.09
HDLBP-219ENST00000442714 PROM2Q8N271 834 aa14.48□□□□□ -0.09
HDLBP-219ENST00000442714 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
HDLBP-219ENST00000442714 NRKQ7Z2Y5 1582 aa14.47□□□□□ -0.09
HDLBP-219ENST00000442714 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
HDLBP-219ENST00000442714 PHRF1Q9P1Y6 1649 aaKnown RBP14.47□□□□□ -0.09
HDLBP-219ENST00000442714 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
HDLBP-219ENST00000442714 EXOC5O00471 708 aa14.46□□□□□ -0.09
HDLBP-219ENST00000442714 SOX12O15370 315 aa14.46□□□□□ -0.09
HDLBP-219ENST00000442714 CARD11Q9BXL7 1154 aa14.46□□□□□ -0.09
HDLBP-219ENST00000442714 KTN1Q86UP2 1357 aaKnown RBP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms