RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 FOXO3O43524 673 aa9.3□□□□□ -0.92
HDAC9-215ENST00000441986 XRN1Q8IZH2 1706 aaKnown RBP9.3□□□□□ -0.92
HDAC9-215ENST00000441986 EP400Q96L91 3159 aa9.3□□□□□ -0.92
HDAC9-215ENST00000441986 SF3B2Q13435 895 aaKnown RBP9.29□□□□□ -0.92
HDAC9-215ENST00000441986 ATRNO75882 1429 aa9.29□□□□□ -0.92
HDAC9-215ENST00000441986 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
HDAC9-215ENST00000441986 NRXN3Q9Y4C0 1643 aa9.28□□□□□ -0.92
HDAC9-215ENST00000441986 PAK3O75914 559 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-215ENST00000441986 PDAP1Q13442 181 aaKnown RBP9.28□□□□□ -0.92
HDAC9-215ENST00000441986 UNC5CLQ8IV45 518 aa9.28□□□□□ -0.92
HDAC9-215ENST00000441986 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
HDAC9-215ENST00000441986 HFM1A2PYH4 1435 aa9.28□□□□□ -0.92
HDAC9-215ENST00000441986 BCL9LQ86UU0 1499 aa9.27□□□□□ -0.93
HDAC9-215ENST00000441986 XPCQ01831 940 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-215ENST00000441986 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
HDAC9-215ENST00000441986 PCDHB13Q9Y5F0 798 aa9.26□□□□□ -0.93
HDAC9-215ENST00000441986 LAMC1P11047 1609 aa9.25□□□□□ -0.93
HDAC9-215ENST00000441986 EVX2Q03828 476 aa9.25□□□□□ -0.93
HDAC9-215ENST00000441986 PSME1Q06323 249 aa9.25□□□□□ -0.93
HDAC9-215ENST00000441986 STK26Q9P289 416 aa9.25□□□□□ -0.93
HDAC9-215ENST00000441986 NEXMIFQ5QGS0 1516 aa9.25□□□□□ -0.93
HDAC9-215ENST00000441986 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
HDAC9-215ENST00000441986 ONECUT3O60422 494 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-215ENST00000441986 KRT28Q7Z3Y7 464 aa9.24□□□□□ -0.93
HDAC9-215ENST00000441986 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
HDAC9-215ENST00000441986 PPARGC1BQ86YN6 1023 aaKnown RBP9.24□□□□□ -0.93
HDAC9-215ENST00000441986 SPHKAPQ2M3C7 1700 aa9.24□□□□□ -0.93
HDAC9-215ENST00000441986 NALCNQ8IZF0 1738 aa9.24□□□□□ -0.93
HDAC9-215ENST00000441986 BLMP54132 1417 aaPredicted RBP9.23□□□□□ -0.93
HDAC9-215ENST00000441986 MYOM2P54296 1465 aa9.23□□□□□ -0.93
HDAC9-215ENST00000441986 DEFB132Q7Z7B7 95 aa9.23□□□□□ -0.93
HDAC9-215ENST00000441986 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
HDAC9-215ENST00000441986 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
HDAC9-215ENST00000441986 PRAG1Q86YV5 1406 aa9.22□□□□□ -0.93
HDAC9-215ENST00000441986 PSEN1P49768 467 aa9.22□□□□□ -0.93
HDAC9-215ENST00000441986 VPS72Q15906 364 aa9.22□□□□□ -0.93
HDAC9-215ENST00000441986 RGL3Q3MIN7 710 aa9.22□□□□□ -0.93
HDAC9-215ENST00000441986 KRT27Q7Z3Y8 459 aa9.22□□□□□ -0.93
HDAC9-215ENST00000441986 CCDC9Q9Y3X0 531 aaKnown RBP9.22□□□□□ -0.93
HDAC9-215ENST00000441986 CLTCL1P53675 1640 aa9.21□□□□□ -0.93
HDAC9-215ENST00000441986 COL22A1Q8NFW1 1626 aaPredicted RBP9.21□□□□□ -0.93
HDAC9-215ENST00000441986 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
HDAC9-215ENST00000441986 KIF12Q96FN5 646 aa9.21□□□□□ -0.94
HDAC9-215ENST00000441986 PXDNQ92626 1479 aa9.21□□□□□ -0.94
HDAC9-215ENST00000441986 KIF1BO60333 1816 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 BAG6P46379 1132 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 TMEM132EQ6IEE7 984 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 LMOD2Q6P5Q4 547 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 ABCC11Q96J66 1382 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 NAIPQ13075 1403 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 RALGAPBQ86X10 1494 aa9.2□□□□□ -0.94
HDAC9-215ENST00000441986 MAP3K13O43283 966 aa9.19□□□□□ -0.94
HDAC9-215ENST00000441986 CABLES1Q8TDN4 633 aa9.19□□□□□ -0.94
HDAC9-215ENST00000441986 PHF8Q9UPP1 1060 aa9.19□□□□□ -0.94
HDAC9-215ENST00000441986 ADGRF5Q8IZF2 1346 aa9.19□□□□□ -0.94
HDAC9-215ENST00000441986 SLIT2O94813 1529 aa9.19□□□□□ -0.94
HDAC9-215ENST00000441986 A0A0G2JS52 829 aa9.18□□□□□ -0.94
HDAC9-215ENST00000441986 CCDC144AA2RUR9 1427 aa9.18□□□□□ -0.94
HDAC9-215ENST00000441986 FAM83GA6ND36 823 aa9.18□□□□□ -0.94
HDAC9-215ENST00000441986 MYT1Q01538 1121 aa9.18□□□□□ -0.94
HDAC9-215ENST00000441986 ANKRD30BQ9BXX2 1392 aa9.18□□□□□ -0.94
HDAC9-215ENST00000441986 CDC42BPGQ6DT37 1551 aa9.16□□□□□ -0.94
HDAC9-215ENST00000441986 CD44P16070 742 aaKnown RBP9.16□□□□□ -0.94
HDAC9-215ENST00000441986 HRCP23327 699 aa9.16□□□□□ -0.94
HDAC9-215ENST00000441986 TECPR2O15040 1411 aa9.15□□□□□ -0.94
HDAC9-215ENST00000441986 SBNO1A3KN83 1393 aa9.15□□□□□ -0.94
HDAC9-215ENST00000441986 ARHGEF10O15013 1369 aa9.15□□□□□ -0.94
HDAC9-215ENST00000441986 PSDA5PKW4 1024 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-215ENST00000441986 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
HDAC9-215ENST00000441986 C14orf93Q9H972 538 aaKnown RBP9.15□□□□□ -0.94
HDAC9-215ENST00000441986 BTG4Q9NY30 223 aa9.15□□□□□ -0.94
HDAC9-215ENST00000441986 RRBP1Q9P2E9 1410 aaKnown RBP9.14□□□□□ -0.95
HDAC9-215ENST00000441986 MARF1Q9Y4F3 1742 aaKnown RBP9.14□□□□□ -0.95
HDAC9-215ENST00000441986 DHX57Q6P158 1386 aaKnown RBP9.14□□□□□ -0.95
HDAC9-215ENST00000441986 PLEKHH1Q9ULM0 1364 aa9.14□□□□□ -0.95
HDAC9-215ENST00000441986 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
HDAC9-215ENST00000441986 MPHOSPH9Q99550 1183 aa9.14□□□□□ -0.95
HDAC9-215ENST00000441986 MFRPQ9BY79 579 aa9.14□□□□□ -0.95
HDAC9-215ENST00000441986 POGKQ9P215 609 aa9.14□□□□□ -0.95
HDAC9-215ENST00000441986 GLI3P10071 1580 aa9.14□□□□□ -0.95
HDAC9-215ENST00000441986 ACIN1Q9UKV3 1341 aaKnown RBP9.13□□□□□ -0.95
HDAC9-215ENST00000441986 PMFBP1Q8TBY8 1022 aa9.13□□□□□ -0.95
HDAC9-215ENST00000441986 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
HDAC9-215ENST00000441986 TNS3Q68CZ2 1445 aa9.13□□□□□ -0.95
HDAC9-215ENST00000441986 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
HDAC9-215ENST00000441986 SAFB2Q14151 953 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC9-215ENST00000441986 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
HDAC9-215ENST00000441986 CFAP70Q5T0N1 1121 aa9.12□□□□□ -0.95
HDAC9-215ENST00000441986 PRAM1Q96QH2 718 aa9.12□□□□□ -0.95
HDAC9-215ENST00000441986 PPLO60437 1756 aa9.12□□□□□ -0.95
HDAC9-215ENST00000441986 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
HDAC9-215ENST00000441986 FAM196AQ6ZSG2 479 aa9.11□□□□□ -0.95
HDAC9-215ENST00000441986 SPATA31E1Q6ZUB1 1445 aa9.11□□□□□ -0.95
HDAC9-215ENST00000441986 KIF1AQ12756 1690 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 SPATA31A5Q5VU36 1347 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 SPATA31A7Q8IWB4 1347 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 USP32Q8NFA0 1604 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 NBR1Q14596 966 aa9.1□□□□□ -0.95
HDAC9-215ENST00000441986 FAM182BQ5T319 152 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms