RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 NUDT16Q96DE0 195 aaKnown RBP11.76□□□□□ -0.53
TIMP1-203ENST00000441738 TRPC5Q9UL62 973 aaPredicted RBP11.76□□□□□ -0.53
TIMP1-203ENST00000441738 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
TIMP1-203ENST00000441738 NRAPQ86VF7 1730 aa11.76□□□□□ -0.53
TIMP1-203ENST00000441738 PPIP5K1Q6PFW1 1433 aa11.76□□□□□ -0.53
TIMP1-203ENST00000441738 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
TIMP1-203ENST00000441738 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.75□□□□□ -0.53
TIMP1-203ENST00000441738 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
TIMP1-203ENST00000441738 LRRC59Q96AG4 307 aaKnown RBP11.75□□□□□ -0.53
TIMP1-203ENST00000441738 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
TIMP1-203ENST00000441738 NPHP3Q7Z494 1330 aa11.75□□□□□ -0.53
TIMP1-203ENST00000441738 USP21Q9UK80 565 aa11.74□□□□□ -0.53
TIMP1-203ENST00000441738 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
TIMP1-203ENST00000441738 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
TIMP1-203ENST00000441738 ST20-MTHFSA0A0A6YYL1 179 aa11.73□□□□□ -0.53
TIMP1-203ENST00000441738 ADAMTS2O95450 1211 aa11.73□□□□□ -0.53
TIMP1-203ENST00000441738 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
TIMP1-203ENST00000441738 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
TIMP1-203ENST00000441738 USP6P35125 1406 aa11.72□□□□□ -0.53
TIMP1-203ENST00000441738 PLEKHG3A1L390 1219 aa11.72□□□□□ -0.53
TIMP1-203ENST00000441738 DEFB132Q7Z7B7 95 aa11.72□□□□□ -0.53
TIMP1-203ENST00000441738 KIF20BQ96Q89 1820 aa11.72□□□□□ -0.53
TIMP1-203ENST00000441738 LMO7Q8WWI1 1683 aa11.71□□□□□ -0.53
TIMP1-203ENST00000441738 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
TIMP1-203ENST00000441738 ACEP12821 1306 aa11.71□□□□□ -0.53
TIMP1-203ENST00000441738 KRT28Q7Z3Y7 464 aa11.71□□□□□ -0.53
TIMP1-203ENST00000441738 COL18A1P39060 1754 aa11.71□□□□□ -0.54
TIMP1-203ENST00000441738 RGPD5Q99666 1765 aa11.71□□□□□ -0.54
TIMP1-203ENST00000441738 SLIT3O75094 1523 aa11.7□□□□□ -0.54
TIMP1-203ENST00000441738 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
TIMP1-203ENST00000441738 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
TIMP1-203ENST00000441738 CCDC61Q9Y6R9 512 aa11.7□□□□□ -0.54
TIMP1-203ENST00000441738 PSDA5PKW4 1024 aaPredicted RBP11.69□□□□□ -0.54
TIMP1-203ENST00000441738 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
TIMP1-203ENST00000441738 LTN1O94822 1766 aa11.69□□□□□ -0.54
TIMP1-203ENST00000441738 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
TIMP1-203ENST00000441738 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
TIMP1-203ENST00000441738 CABP1Q9NZU7 370 aa11.68□□□□□ -0.54
TIMP1-203ENST00000441738 EP400Q96L91 3159 aa11.68□□□□□ -0.54
TIMP1-203ENST00000441738 ATRNO75882 1429 aa11.68□□□□□ -0.54
TIMP1-203ENST00000441738 NFAT5O94916 1531 aa11.67□□□□□ -0.54
TIMP1-203ENST00000441738 ANKRD26Q9UPS8 1709 aa11.67□□□□□ -0.54
TIMP1-203ENST00000441738 GLI3P10071 1580 aa11.67□□□□□ -0.54
TIMP1-203ENST00000441738 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
TIMP1-203ENST00000441738 SLIT2O94813 1529 aa11.66□□□□□ -0.54
TIMP1-203ENST00000441738 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
TIMP1-203ENST00000441738 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
TIMP1-203ENST00000441738 WNK3Q9BYP7 1800 aa11.65□□□□□ -0.54
TIMP1-203ENST00000441738 BCL9LQ86UU0 1499 aa11.65□□□□□ -0.54
TIMP1-203ENST00000441738 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.55
TIMP1-203ENST00000441738 USP19O94966 1318 aa11.64□□□□□ -0.55
TIMP1-203ENST00000441738 SENP3-EIF4A1A0A087X0R7 540 aa11.64□□□□□ -0.55
TIMP1-203ENST00000441738 C11orf95C9JLR9 678 aaPredicted RBP11.64□□□□□ -0.55
TIMP1-203ENST00000441738 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
TIMP1-203ENST00000441738 PSME1Q06323 249 aa11.64□□□□□ -0.55
TIMP1-203ENST00000441738 NGDNQ8NEJ9 315 aaKnown RBP11.64□□□□□ -0.55
TIMP1-203ENST00000441738 PUS7Q96PZ0 661 aaKnown RBP11.64□□□□□ -0.55
TIMP1-203ENST00000441738 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
TIMP1-203ENST00000441738 OVOS2A0A0J9YW53 1432 aa11.62□□□□□ -0.55
TIMP1-203ENST00000441738 OVOS2Q6IE36 1432 aa11.62□□□□□ -0.55
TIMP1-203ENST00000441738 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
TIMP1-203ENST00000441738 BRD4O60885 1362 aaPredicted RBP11.62□□□□□ -0.55
TIMP1-203ENST00000441738 EDC4Q6P2E9 1401 aaKnown RBP11.61□□□□□ -0.55
TIMP1-203ENST00000441738 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
TIMP1-203ENST00000441738 NINLQ9Y2I6 1382 aa11.61□□□□□ -0.55
TIMP1-203ENST00000441738 CAMTA1Q9Y6Y1 1673 aa11.61□□□□□ -0.55
TIMP1-203ENST00000441738 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
TIMP1-203ENST00000441738 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
TIMP1-203ENST00000441738 RGPD2P0DJD1 1756 aa11.6□□□□□ -0.55
TIMP1-203ENST00000441738 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
TIMP1-203ENST00000441738 THSD7AQ9UPZ6 1657 aa11.59□□□□□ -0.55
TIMP1-203ENST00000441738 USP31Q70CQ4 1352 aa11.59□□□□□ -0.55
TIMP1-203ENST00000441738 BAG6P46379 1132 aa11.59□□□□□ -0.55
TIMP1-203ENST00000441738 NUTM2GQ5VZR2 741 aa11.59□□□□□ -0.55
TIMP1-203ENST00000441738 DCAF8L1A6NGE4 600 aa11.58□□□□□ -0.56
TIMP1-203ENST00000441738 PAK3O75914 559 aaPredicted RBP11.58□□□□□ -0.56
TIMP1-203ENST00000441738 EIF4G2P78344 907 aaKnown RBP eCLIP11.58□□□□□ -0.56
TIMP1-203ENST00000441738 TMF1P82094 1093 aa11.58□□□□□ -0.56
TIMP1-203ENST00000441738 CPDO75976 1380 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 KIAA0232Q92628 1395 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 R3HDM1Q15032 1099 aaKnown RBP11.57□□□□□ -0.56
TIMP1-203ENST00000441738 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 CARD14Q9BXL6 1004 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 MAP2P11137 1827 aaKnown RBP11.57□□□□□ -0.56
TIMP1-203ENST00000441738 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
TIMP1-203ENST00000441738 ABCC6O95255 1503 aa11.56□□□□□ -0.56
TIMP1-203ENST00000441738 FAM83GA6ND36 823 aa11.56□□□□□ -0.56
TIMP1-203ENST00000441738 NME9Q86XW9 330 aa11.56□□□□□ -0.56
TIMP1-203ENST00000441738 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
TIMP1-203ENST00000441738 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
TIMP1-203ENST00000441738 ZNF692Q9BU19 519 aaPredicted RBP11.55□□□□□ -0.56
TIMP1-203ENST00000441738 COL5A2P05997 1499 aaPredicted RBP11.55□□□□□ -0.56
TIMP1-203ENST00000441738 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
TIMP1-203ENST00000441738 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
TIMP1-203ENST00000441738 NSD3Q9BZ95 1437 aa11.54□□□□□ -0.56
TIMP1-203ENST00000441738 PARP4Q9UKK3 1724 aaKnown RBP11.54□□□□□ -0.56
TIMP1-203ENST00000441738 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
TIMP1-203ENST00000441738 SHANK3Q9BYB0 1731 aa11.53□□□□□ -0.56
TIMP1-203ENST00000441738 C1QTNF8P60827 252 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 309.6 ms