RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 WASLO00401 505 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-204ENST00000440835 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-204ENST00000440835 KRT27Q7Z3Y8 459 aa8.74□□□□□ -1.01
PTPRR-204ENST00000440835 PARD3Q8TEW0 1356 aa8.73□□□□□ -1.01
PTPRR-204ENST00000440835 PHRF1Q9P1Y6 1649 aaKnown RBP8.73□□□□□ -1.01
PTPRR-204ENST00000440835 BAG6P46379 1132 aa8.73□□□□□ -1.01
PTPRR-204ENST00000440835 POLR3AO14802 1390 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-204ENST00000440835 NUTM2FA1L443 756 aa8.72□□□□□ -1.01
PTPRR-204ENST00000440835 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
PTPRR-204ENST00000440835 SPATA31A5Q5VU36 1347 aa8.72□□□□□ -1.01
PTPRR-204ENST00000440835 SPATA31A7Q8IWB4 1347 aa8.72□□□□□ -1.01
PTPRR-204ENST00000440835 FAM83GA6ND36 823 aa8.71□□□□□ -1.02
PTPRR-204ENST00000440835 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.02
PTPRR-204ENST00000440835 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.02
PTPRR-204ENST00000440835 NGDNQ8NEJ9 315 aaKnown RBP8.7□□□□□ -1.02
PTPRR-204ENST00000440835 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
PTPRR-204ENST00000440835 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
PTPRR-204ENST00000440835 CPDO75976 1380 aa8.7□□□□□ -1.02
PTPRR-204ENST00000440835 RGPD3A6NKT7 1758 aaPredicted RBP8.69□□□□□ -1.02
PTPRR-204ENST00000440835 RGPD4Q7Z3J3 1758 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 PRR36Q9H6K5 1346 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 BARGINQ6ZT62 677 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 BTG4Q9NY30 223 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
PTPRR-204ENST00000440835 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
PTPRR-204ENST00000440835 THRAP3Q9Y2W1 955 aaKnown RBP8.68□□□□□ -1.02
PTPRR-204ENST00000440835 FAM196AQ6ZSG2 479 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 CABLES1Q8TDN4 633 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 LMO7Q8WWI1 1683 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 NRKQ7Z2Y5 1582 aa8.68□□□□□ -1.02
PTPRR-204ENST00000440835 MINK1Q8N4C8 1332 aaPredicted RBP8.68□□□□□ -1.02
PTPRR-204ENST00000440835 RREB1Q92766 1687 aa8.67□□□□□ -1.02
PTPRR-204ENST00000440835 PRDM11Q9NQV5 511 aa8.67□□□□□ -1.02
PTPRR-204ENST00000440835 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
PTPRR-204ENST00000440835 PARP4Q9UKK3 1724 aaKnown RBP8.67□□□□□ -1.02
PTPRR-204ENST00000440835 SPATA31A1Q5TZJ5 1347 aa8.67□□□□□ -1.02
PTPRR-204ENST00000440835 USP19O94966 1318 aa8.67□□□□□ -1.02
PTPRR-204ENST00000440835 SAFB2Q14151 953 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPRR-204ENST00000440835 ABCC6O95255 1503 aa8.66□□□□□ -1.02
PTPRR-204ENST00000440835 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
PTPRR-204ENST00000440835 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
PTPRR-204ENST00000440835 SSH2Q76I76 1423 aa8.65□□□□□ -1.02
PTPRR-204ENST00000440835 CDK19Q9BWU1 502 aa8.65□□□□□ -1.02
PTPRR-204ENST00000440835 KIAA0232Q92628 1395 aa8.65□□□□□ -1.03
PTPRR-204ENST00000440835 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 DEFB132Q7Z7B7 95 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 NLRP13Q86W25 1043 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 SLIT3O75094 1523 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 A0A0G2JS52 829 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 PAK3O75914 559 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-204ENST00000440835 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-204ENST00000440835 KDM2AQ9Y2K7 1162 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 ACEP12821 1306 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 TRPM1Q7Z4N2 1603 aa8.64□□□□□ -1.03
PTPRR-204ENST00000440835 HIRIP3Q9BW71 556 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-204ENST00000440835 BCL9O00512 1426 aa8.63□□□□□ -1.03
PTPRR-204ENST00000440835 WNK3Q9BYP7 1800 aa8.63□□□□□ -1.03
PTPRR-204ENST00000440835 CDCA7Q9BWT1 371 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-204ENST00000440835 CENPJQ9HC77 1338 aaPredicted RBP8.63□□□□□ -1.03
PTPRR-204ENST00000440835 NUP188Q5SRE5 1749 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 AATKQ6ZMQ8 1374 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 EVA1CP58658 441 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 TCP11L2Q8N4U5 519 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 PPIP5K1Q6PFW1 1433 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 CAMKK2Q96RR4 588 aa8.62□□□□□ -1.03
PTPRR-204ENST00000440835 AKAP12Q02952 1782 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 PEAK1Q9H792 1746 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 CAMTA1Q9Y6Y1 1673 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 ZNF692Q9BU19 519 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-204ENST00000440835 CRB1P82279 1406 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 ABTB2Q8N961 1025 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 ARXQ96QS3 562 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 COL5A2P05997 1499 aaPredicted RBP8.61□□□□□ -1.03
PTPRR-204ENST00000440835 USP6P35125 1406 aa8.61□□□□□ -1.03
PTPRR-204ENST00000440835 COL18A1P39060 1754 aa8.6□□□□□ -1.03
PTPRR-204ENST00000440835 TTC21AQ8NDW8 1320 aa8.6□□□□□ -1.03
PTPRR-204ENST00000440835 SBF2Q86WG5 1849 aa8.6□□□□□ -1.03
PTPRR-204ENST00000440835 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 OVOS2A0A0G2JMS6 1433 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 OVOS2A0A0J9YW53 1432 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 EN1Q05925 392 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-204ENST00000440835 OVOS2Q6IE36 1432 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 GCP02774 474 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 KCNH5Q8NCM2 988 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 SBNO2Q9Y2G9 1366 aa8.59□□□□□ -1.03
PTPRR-204ENST00000440835 LRRC37A3O60309 1634 aa8.58□□□□□ -1.04
PTPRR-204ENST00000440835 PIK3C2AO00443 1686 aa8.58□□□□□ -1.04
PTPRR-204ENST00000440835 SRPK2P78362 688 aaKnown RBP8.58□□□□□ -1.04
PTPRR-204ENST00000440835 PLSCR1O15162 318 aa8.58□□□□□ -1.04
PTPRR-204ENST00000440835 APBA3O96018 575 aa8.58□□□□□ -1.04
PTPRR-204ENST00000440835 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
PTPRR-204ENST00000440835 NINLQ9Y2I6 1382 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms