RNA–Protein interactions for RNA: ENST00000440827.3

PXN-205, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-205ENST00000440827 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
PXN-205ENST00000440827 ATRNO75882 1429 aa22.83■■□□□ 1.25
PXN-205ENST00000440827 FAM83GA6ND36 823 aa22.83■■□□□ 1.25
PXN-205ENST00000440827 CDK12Q9NYV4 1490 aaPredicted RBP22.83■■□□□ 1.25
PXN-205ENST00000440827 TOPAZ1Q8N9V7 1692 aa22.83■■□□□ 1.24
PXN-205ENST00000440827 RGS12O14924 1447 aa22.82■■□□□ 1.24
PXN-205ENST00000440827 ALS2Q96Q42 1657 aa22.82■■□□□ 1.24
PXN-205ENST00000440827 CCDC9Q9Y3X0 531 aaKnown RBP22.82■■□□□ 1.24
PXN-205ENST00000440827 RALGAPBQ86X10 1494 aa22.81■■□□□ 1.24
PXN-205ENST00000440827 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
PXN-205ENST00000440827 GJD4Q96KN9 370 aaPredicted RBP22.81■■□□□ 1.24
PXN-205ENST00000440827 SLIT2O94813 1529 aa22.8■■□□□ 1.24
PXN-205ENST00000440827 ABCA3Q99758 1704 aa22.79■■□□□ 1.24
PXN-205ENST00000440827 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.24
PXN-205ENST00000440827 BTG4Q9NY30 223 aa22.77■■□□□ 1.24
PXN-205ENST00000440827 ZC3H6P61129 1189 aaKnown RBP22.76■■□□□ 1.23
PXN-205ENST00000440827 UPF1Q92900 1129 aaKnown RBP eCLIP22.76■■□□□ 1.23
PXN-205ENST00000440827 CHRNA2Q15822 529 aa22.74■■□□□ 1.23
PXN-205ENST00000440827 VPS72Q15906 364 aa22.74■■□□□ 1.23
PXN-205ENST00000440827 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
PXN-205ENST00000440827 PLCH1Q4KWH8 1693 aa22.73■■□□□ 1.23
PXN-205ENST00000440827 KIAA0232Q92628 1395 aa22.73■■□□□ 1.23
PXN-205ENST00000440827 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
PXN-205ENST00000440827 TMC1Q8TDI8 760 aa22.72■■□□□ 1.23
PXN-205ENST00000440827 ATAD2Q6PL18 1390 aa22.72■■□□□ 1.23
PXN-205ENST00000440827 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
PXN-205ENST00000440827 NLRP6P59044 892 aa22.71■■□□□ 1.23
PXN-205ENST00000440827 USP6P35125 1406 aa22.71■■□□□ 1.23
PXN-205ENST00000440827 ST20-MTHFSA0A0A6YYL1 179 aa22.7■■□□□ 1.22
PXN-205ENST00000440827 A0A0G2JS52 829 aa22.7■■□□□ 1.22
PXN-205ENST00000440827 MYT1Q01538 1121 aa22.7■■□□□ 1.22
PXN-205ENST00000440827 SBNO2Q9Y2G9 1366 aa22.7■■□□□ 1.22
PXN-205ENST00000440827 ZBTB7CA1YPR0 619 aa22.69■■□□□ 1.22
PXN-205ENST00000440827 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
PXN-205ENST00000440827 COL14A1Q05707 1796 aaKnown RBP22.68■■□□□ 1.22
PXN-205ENST00000440827 NWD2Q9ULI1 1742 aa22.68■■□□□ 1.22
PXN-205ENST00000440827 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
PXN-205ENST00000440827 STRN4Q9NRL3 753 aa22.68■■□□□ 1.22
PXN-205ENST00000440827 CRYBG1Q9Y4K1 1723 aa22.68■■□□□ 1.22
PXN-205ENST00000440827 GLI3P10071 1580 aa22.67■■□□□ 1.22
PXN-205ENST00000440827 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
PXN-205ENST00000440827 GCP02774 474 aa22.67■■□□□ 1.22
PXN-205ENST00000440827 SEPT12Q8IYM1 358 aa22.66■■□□□ 1.22
PXN-205ENST00000440827 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
PXN-205ENST00000440827 KTN1Q86UP2 1357 aaKnown RBP22.65■■□□□ 1.22
PXN-205ENST00000440827 USP19O94966 1318 aa22.65■■□□□ 1.22
PXN-205ENST00000440827 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
PXN-205ENST00000440827 EVA1CP58658 441 aa22.65■■□□□ 1.22
PXN-205ENST00000440827 TIMELESSQ9UNS1 1208 aa22.65■■□□□ 1.22
PXN-205ENST00000440827 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
PXN-205ENST00000440827 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.21
PXN-205ENST00000440827 SOX12O15370 315 aa22.63■■□□□ 1.21
PXN-205ENST00000440827 TESK2Q96S53 571 aa22.63■■□□□ 1.21
PXN-205ENST00000440827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.62■■□□□ 1.214e-6■■□□□ 14.5
PXN-205ENST00000440827 SSH2Q76I76 1423 aa22.62■■□□□ 1.21
PXN-205ENST00000440827 HDGFL2Q7Z4V5 671 aaPredicted RBP22.61■■□□□ 1.21
PXN-205ENST00000440827 NRAPQ86VF7 1730 aa22.61■■□□□ 1.21
PXN-205ENST00000440827 USP47Q96K76 1375 aa22.61■■□□□ 1.21
PXN-205ENST00000440827 SPATA31A5Q5VU36 1347 aa22.6■■□□□ 1.21
PXN-205ENST00000440827 SPATA31A7Q8IWB4 1347 aa22.6■■□□□ 1.21
PXN-205ENST00000440827 NRKQ7Z2Y5 1582 aa22.6■■□□□ 1.21
PXN-205ENST00000440827 CPSF1Q10570 1443 aaKnown RBP22.6■■□□□ 1.21
PXN-205ENST00000440827 USP35Q9P2H5 1018 aa22.6■■□□□ 1.21
PXN-205ENST00000440827 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
PXN-205ENST00000440827 ONECUT3O60422 494 aaPredicted RBP22.59■■□□□ 1.21
PXN-205ENST00000440827 SLC24A1O60721 1099 aa22.58■■□□□ 1.21
PXN-205ENST00000440827 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
PXN-205ENST00000440827 CPDO75976 1380 aa22.58■■□□□ 1.21
PXN-205ENST00000440827 AKAP12Q02952 1782 aa22.58■■□□□ 1.2
PXN-205ENST00000440827 KRT27Q7Z3Y8 459 aa22.57■■□□□ 1.2
PXN-205ENST00000440827 ZRANB1Q9UGI0 708 aa22.57■■□□□ 1.2
PXN-205ENST00000440827 PIK3C2AO00443 1686 aa22.57■■□□□ 1.2
PXN-205ENST00000440827 TMF1P82094 1093 aa22.56■■□□□ 1.2
PXN-205ENST00000440827 LARP1Q6PKG0 1096 aaKnown RBP22.56■■□□□ 1.2
PXN-205ENST00000440827 PUS7Q96PZ0 661 aaKnown RBP22.56■■□□□ 1.2
PXN-205ENST00000440827 NME9Q86XW9 330 aa22.55■■□□□ 1.2
PXN-205ENST00000440827 CAMTA1Q9Y6Y1 1673 aa22.55■■□□□ 1.2
PXN-205ENST00000440827 SPATA31A1Q5TZJ5 1347 aa22.55■■□□□ 1.2
PXN-205ENST00000440827 KCNH5Q8NCM2 988 aa22.54■■□□□ 1.2
PXN-205ENST00000440827 CD163L1Q9NR16 1453 aa22.54■■□□□ 1.2
PXN-205ENST00000440827 BRWD3Q6RI45 1802 aa22.53■■□□□ 1.2
PXN-205ENST00000440827 SLIT3O75094 1523 aa22.52■■□□□ 1.2
PXN-205ENST00000440827 A0A1W2PP64 1363 aa22.52■■□□□ 1.2
PXN-205ENST00000440827 FAM182BQ5T319 152 aa22.51■■□□□ 1.19
PXN-205ENST00000440827 MON2Q7Z3U7 1717 aa22.51■■□□□ 1.19
PXN-205ENST00000440827 CCDC125Q86Z20 511 aa22.5■■□□□ 1.19
PXN-205ENST00000440827 AATKQ6ZMQ8 1374 aa22.5■■□□□ 1.19
PXN-205ENST00000440827 ARHGEF25Q86VW2 580 aa22.49■■□□□ 1.19
PXN-205ENST00000440827 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
PXN-205ENST00000440827 LMO7Q8WWI1 1683 aa22.48■■□□□ 1.19
PXN-205ENST00000440827 SF3B2Q13435 895 aaKnown RBP22.47■■□□□ 1.19
PXN-205ENST00000440827 TOM1L2Q6ZVM7 507 aa22.47■■□□□ 1.19
PXN-205ENST00000440827 TCP11L2Q8N4U5 519 aa22.47■■□□□ 1.19
PXN-205ENST00000440827 AXIN2Q9Y2T1 843 aa22.47■■□□□ 1.19
PXN-205ENST00000440827 NINLQ9Y2I6 1382 aa22.47■■□□□ 1.19
PXN-205ENST00000440827 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
PXN-205ENST00000440827 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
PXN-205ENST00000440827 USP31Q70CQ4 1352 aa22.46■■□□□ 1.19
PXN-205ENST00000440827 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.18
PXN-205ENST00000440827 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms