RNA–Protein interactions for RNA: ENST00000440825.6

FAAP20-210, Transcript of FA core complex associated protein 20, humanhuman

TSL 3

Gene FAAP20, Length 855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-210ENST00000440825 PLEKHG3A1L390 1219 aa39.45■■■■□ 3.91
FAAP20-210ENST00000440825 ATRNO75882 1429 aa39.45■■■■□ 3.91
FAAP20-210ENST00000440825 POLR3AO14802 1390 aaPredicted RBP39.45■■■■□ 3.91
FAAP20-210ENST00000440825 RGS12O14924 1447 aa39.44■■■■□ 3.9
FAAP20-210ENST00000440825 RALGAPBQ86X10 1494 aa39.43■■■■□ 3.9
FAAP20-210ENST00000440825 NUTM2GQ5VZR2 741 aa39.42■■■■□ 3.9
FAAP20-210ENST00000440825 UNC5CLQ8IV45 518 aa39.4■■■■□ 3.9
FAAP20-210ENST00000440825 SLIT2O94813 1529 aa39.4■■■■□ 3.9
FAAP20-210ENST00000440825 CABP1Q9NZU7 370 aa39.39■■■■□ 3.9
FAAP20-210ENST00000440825 PLCH1Q4KWH8 1693 aa39.35■■■■□ 3.89
FAAP20-210ENST00000440825 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.34■■■■□ 3.89
FAAP20-210ENST00000440825 FAM83GA6ND36 823 aa39.34■■■■□ 3.89
FAAP20-210ENST00000440825 GJD4Q96KN9 370 aaPredicted RBP39.33■■■■□ 3.89
FAAP20-210ENST00000440825 ABTB2Q8N961 1025 aa39.32■■■■□ 3.89
FAAP20-210ENST00000440825 CCDC9Q9Y3X0 531 aaKnown RBP39.32■■■■□ 3.89
FAAP20-210ENST00000440825 CRYBG1Q9Y4K1 1723 aa39.3■■■■□ 3.88
FAAP20-210ENST00000440825 NWD2Q9ULI1 1742 aa39.27■■■■□ 3.88
FAAP20-210ENST00000440825 PRDM11Q9NQV5 511 aa39.26■■■■□ 3.88
FAAP20-210ENST00000440825 BTG4Q9NY30 223 aa39.26■■■■□ 3.88
FAAP20-210ENST00000440825 UPF1Q92900 1129 aaKnown RBP eCLIP39.25■■■■□ 3.87
FAAP20-210ENST00000440825 PHRF1Q9P1Y6 1649 aaKnown RBP39.25■■■■□ 3.87
FAAP20-210ENST00000440825 COL14A1Q05707 1796 aaKnown RBP39.23■■■■□ 3.87
FAAP20-210ENST00000440825 ZC3H6P61129 1189 aaKnown RBP39.23■■■■□ 3.87
FAAP20-210ENST00000440825 USP6P35125 1406 aa39.22■■■■□ 3.87
FAAP20-210ENST00000440825 ATAD2Q6PL18 1390 aa39.21■■■■□ 3.87
FAAP20-210ENST00000440825 SBNO2Q9Y2G9 1366 aa39.21■■■■□ 3.87
FAAP20-210ENST00000440825 GLI3P10071 1580 aa39.21■■■■□ 3.87
FAAP20-210ENST00000440825 VPS72Q15906 364 aa39.21■■■■□ 3.87
FAAP20-210ENST00000440825 KIAA0232Q92628 1395 aa39.21■■■■□ 3.87
FAAP20-210ENST00000440825 CHRNA2Q15822 529 aa39.19■■■■□ 3.86
FAAP20-210ENST00000440825 NLRP13Q86W25 1043 aa39.17■■■■□ 3.86
FAAP20-210ENST00000440825 NRAPQ86VF7 1730 aa39.16■■■■□ 3.86
FAAP20-210ENST00000440825 BRD4O60885 1362 aaPredicted RBP39.16■■■■□ 3.86
FAAP20-210ENST00000440825 CLSPNQ9HAW4 1339 aa39.14■■■■□ 3.86
FAAP20-210ENST00000440825 ST20-MTHFSA0A0A6YYL1 179 aa39.14■■■■□ 3.86
FAAP20-210ENST00000440825 CCER1Q8TC90 406 aaPredicted RBP39.13■■■■□ 3.85
FAAP20-210ENST00000440825 TMC1Q8TDI8 760 aa39.13■■■■□ 3.85
FAAP20-210ENST00000440825 NLRP6P59044 892 aa39.12■■■■□ 3.85
FAAP20-210ENST00000440825 ZNF692Q9BU19 519 aaPredicted RBP39.12■■■■□ 3.85
FAAP20-210ENST00000440825 NRKQ7Z2Y5 1582 aa39.12■■■■□ 3.85
FAAP20-210ENST00000440825 USP19O94966 1318 aa39.11■■■■□ 3.85
FAAP20-210ENST00000440825 A0A0G2JS52 829 aa39.1■■■■□ 3.85
FAAP20-210ENST00000440825 MYT1Q01538 1121 aa39.1■■■■□ 3.85
FAAP20-210ENST00000440825 AKAP12Q02952 1782 aa39.1■■■■□ 3.85
FAAP20-210ENST00000440825 ZBTB7CA1YPR0 619 aa39.09■■■■□ 3.85
FAAP20-210ENST00000440825 KTN1Q86UP2 1357 aaKnown RBP39.08■■■■□ 3.85
FAAP20-210ENST00000440825 GCP02774 474 aa39.08■■■■□ 3.85
FAAP20-210ENST00000440825 STRN4Q9NRL3 753 aa39.08■■■■□ 3.85
FAAP20-210ENST00000440825 SEPT12Q8IYM1 358 aa39.07■■■■□ 3.85
FAAP20-210ENST00000440825 TTC21BQ7Z4L5 1316 aa39.07■■■■□ 3.84
FAAP20-210ENST00000440825 SSH2Q76I76 1423 aa39.06■■■■□ 3.84
FAAP20-210ENST00000440825 PIK3C2AO00443 1686 aa39.05■■■■□ 3.84
FAAP20-210ENST00000440825 FAM98CQ17RN3 349 aaKnown RBP39.04■■■■□ 3.84
FAAP20-210ENST00000440825 TIMELESSQ9UNS1 1208 aa39.04■■■■□ 3.84
FAAP20-210ENST00000440825 CPSF1Q10570 1443 aaKnown RBP39.04■■■■□ 3.84
FAAP20-210ENST00000440825 TESK2Q96S53 571 aa39.03■■■■□ 3.84
FAAP20-210ENST00000440825 USP47Q96K76 1375 aa39.03■■■■□ 3.84
FAAP20-210ENST00000440825 EVA1CP58658 441 aa39.01■■■■□ 3.84
FAAP20-210ENST00000440825 SLC12A5Q9H2X9 1139 aa39.01■■■■□ 3.84
FAAP20-210ENST00000440825 BRWD3Q6RI45 1802 aa39■■■■□ 3.83
FAAP20-210ENST00000440825 HDGFL2Q7Z4V5 671 aaPredicted RBP38.99■■■■□ 3.83
FAAP20-210ENST00000440825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.99■■■■□ 3.83
FAAP20-210ENST00000440825 CPDO75976 1380 aa38.98■■■■□ 3.83
FAAP20-210ENST00000440825 SPATA31A5Q5VU36 1347 aa38.98■■■■□ 3.83
FAAP20-210ENST00000440825 SPATA31A7Q8IWB4 1347 aa38.98■■■■□ 3.83
FAAP20-210ENST00000440825 TTC21AQ8NDW8 1320 aa38.98■■■■□ 3.83
FAAP20-210ENST00000440825 SOX12O15370 315 aa38.98■■■■□ 3.83
FAAP20-210ENST00000440825 MON2Q7Z3U7 1717 aa38.97■■■■□ 3.83
FAAP20-210ENST00000440825 ONECUT3O60422 494 aaPredicted RBP38.95■■■■□ 3.83
FAAP20-210ENST00000440825 SLIT3O75094 1523 aa38.94■■■■□ 3.82
FAAP20-210ENST00000440825 CD163L1Q9NR16 1453 aa38.94■■■■□ 3.82
FAAP20-210ENST00000440825 USP35Q9P2H5 1018 aa38.94■■■■□ 3.82
FAAP20-210ENST00000440825 SLC24A1O60721 1099 aa38.93■■■■□ 3.82
FAAP20-210ENST00000440825 CAMTA1Q9Y6Y1 1673 aa38.93■■■■□ 3.82
FAAP20-210ENST00000440825 PUS7Q96PZ0 661 aaKnown RBP38.92■■■■□ 3.82
FAAP20-210ENST00000440825 TERF2IPQ9NYB0 399 aa38.92■■■■□ 3.82
FAAP20-210ENST00000440825 KRT27Q7Z3Y8 459 aa38.91■■■■□ 3.82
FAAP20-210ENST00000440825 EP400Q96L91 3159 aa38.91■■■■□ 3.82
FAAP20-210ENST00000440825 LMO7Q8WWI1 1683 aa38.9■■■■□ 3.82
FAAP20-210ENST00000440825 SPATA31A1Q5TZJ5 1347 aa38.89■■■■□ 3.82
FAAP20-210ENST00000440825 TMF1P82094 1093 aa38.89■■■■□ 3.82
FAAP20-210ENST00000440825 ZRANB1Q9UGI0 708 aa38.89■■■■□ 3.82
FAAP20-210ENST00000440825 A0A1W2PP64 1363 aa38.88■■■■□ 3.81
FAAP20-210ENST00000440825 LARP1Q6PKG0 1096 aaKnown RBP38.88■■■■□ 3.81
FAAP20-210ENST00000440825 NME9Q86XW9 330 aa38.87■■■■□ 3.81
FAAP20-210ENST00000440825 KCNH5Q8NCM2 988 aa38.86■■■■□ 3.81
FAAP20-210ENST00000440825 EDC4Q6P2E9 1401 aaKnown RBP38.83■■■■□ 3.81
FAAP20-210ENST00000440825 AATKQ6ZMQ8 1374 aa38.82■■■■□ 3.8
FAAP20-210ENST00000440825 NINLQ9Y2I6 1382 aa38.82■■■■□ 3.8
FAAP20-210ENST00000440825 COL5A2P05997 1499 aaPredicted RBP38.81■■■■□ 3.8
FAAP20-210ENST00000440825 THSD7AQ9UPZ6 1657 aa38.78■■■■□ 3.8
FAAP20-210ENST00000440825 FAM182BQ5T319 152 aa38.77■■■■□ 3.8
FAAP20-210ENST00000440825 ARHGEF25Q86VW2 580 aa38.77■■■■□ 3.8
FAAP20-210ENST00000440825 CCDC125Q86Z20 511 aa38.77■■■■□ 3.8
FAAP20-210ENST00000440825 TCP11L2Q8N4U5 519 aa38.76■■■■□ 3.8
FAAP20-210ENST00000440825 USP31Q70CQ4 1352 aa38.75■■■■□ 3.79
FAAP20-210ENST00000440825 AXIN2Q9Y2T1 843 aa38.75■■■■□ 3.79
FAAP20-210ENST00000440825 NFAT5O94916 1531 aa38.74■■■■□ 3.79
FAAP20-210ENST00000440825 BLMP54132 1417 aaPredicted RBP38.73■■■■□ 3.79
FAAP20-210ENST00000440825 SF3B2Q13435 895 aaKnown RBP38.73■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms