RNA–Protein interactions for RNA: ENST00000440711.1

LINC01006-205, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 336 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-205ENST00000440711 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
LINC01006-205ENST00000440711 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
LINC01006-205ENST00000440711 PLEKHG5O94827 1062 aa13.17□□□□□ -0.3
LINC01006-205ENST00000440711 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
LINC01006-205ENST00000440711 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
LINC01006-205ENST00000440711 TONSLQ96HA7 1378 aa13.17□□□□□ -0.3
LINC01006-205ENST00000440711 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
LINC01006-205ENST00000440711 RGS12O14924 1447 aa13.16□□□□□ -0.3
LINC01006-205ENST00000440711 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
LINC01006-205ENST00000440711 CARD11Q9BXL7 1154 aa13.16□□□□□ -0.3
LINC01006-205ENST00000440711 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
LINC01006-205ENST00000440711 ATAD2Q6PL18 1390 aa13.15□□□□□ -0.3
LINC01006-205ENST00000440711 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
LINC01006-205ENST00000440711 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
LINC01006-205ENST00000440711 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
LINC01006-205ENST00000440711 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
LINC01006-205ENST00000440711 PPIP5K1Q6PFW1 1433 aa13.13□□□□□ -0.31
LINC01006-205ENST00000440711 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
LINC01006-205ENST00000440711 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
LINC01006-205ENST00000440711 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
LINC01006-205ENST00000440711 SBNO2Q9Y2G9 1366 aa13.11□□□□□ -0.31
LINC01006-205ENST00000440711 GCP02774 474 aa13.11□□□□□ -0.31
LINC01006-205ENST00000440711 ZC3H6P61129 1189 aaKnown RBP13.11□□□□□ -0.31
LINC01006-205ENST00000440711 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
LINC01006-205ENST00000440711 CLSPNQ9HAW4 1339 aa13.11□□□□□ -0.31
LINC01006-205ENST00000440711 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
LINC01006-205ENST00000440711 EVA1CP58658 441 aa13.1□□□□□ -0.31
LINC01006-205ENST00000440711 NLRP6P59044 892 aa13.1□□□□□ -0.31
LINC01006-205ENST00000440711 SPATA31A5Q5VU36 1347 aa13.1□□□□□ -0.31
LINC01006-205ENST00000440711 SPATA31A7Q8IWB4 1347 aa13.1□□□□□ -0.31
LINC01006-205ENST00000440711 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
LINC01006-205ENST00000440711 ALS2Q96Q42 1657 aa13.09□□□□□ -0.31
LINC01006-205ENST00000440711 ITSN1Q15811 1721 aa13.09□□□□□ -0.31
LINC01006-205ENST00000440711 USP19O94966 1318 aa13.09□□□□□ -0.31
LINC01006-205ENST00000440711 CPDO75976 1380 aa13.08□□□□□ -0.31
LINC01006-205ENST00000440711 KIAA0232Q92628 1395 aa13.08□□□□□ -0.31
LINC01006-205ENST00000440711 KRT27Q7Z3Y8 459 aa13.08□□□□□ -0.32
LINC01006-205ENST00000440711 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.08□□□□□ -0.32
LINC01006-205ENST00000440711 USP6P35125 1406 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 CHRNA2Q15822 529 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
LINC01006-205ENST00000440711 KCNH5Q8NCM2 988 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 TTC21BQ7Z4L5 1316 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
LINC01006-205ENST00000440711 NWD2Q9ULI1 1742 aa13.06□□□□□ -0.32
LINC01006-205ENST00000440711 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
LINC01006-205ENST00000440711 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
LINC01006-205ENST00000440711 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
LINC01006-205ENST00000440711 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
LINC01006-205ENST00000440711 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
LINC01006-205ENST00000440711 GLI3P10071 1580 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 SF3B2Q13435 895 aaKnown RBP13.04□□□□□ -0.32
LINC01006-205ENST00000440711 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
LINC01006-205ENST00000440711 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 TESK2Q96S53 571 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 PCGF6Q9BYE7 350 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
LINC01006-205ENST00000440711 A0A0G2JS52 829 aa13.03□□□□□ -0.32
LINC01006-205ENST00000440711 MYT1Q01538 1121 aa13.03□□□□□ -0.32
LINC01006-205ENST00000440711 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
LINC01006-205ENST00000440711 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
LINC01006-205ENST00000440711 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
LINC01006-205ENST00000440711 ARHGEF25Q86VW2 580 aa13.02□□□□□ -0.33
LINC01006-205ENST00000440711 TCP11L2Q8N4U5 519 aa13.02□□□□□ -0.33
LINC01006-205ENST00000440711 EP400Q96L91 3159 aa13.02□□□□□ -0.33
LINC01006-205ENST00000440711 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
LINC01006-205ENST00000440711 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
LINC01006-205ENST00000440711 BLMP54132 1417 aaPredicted RBP13.01□□□□□ -0.33
LINC01006-205ENST00000440711 ABCA3Q99758 1704 aa13.01□□□□□ -0.33
LINC01006-205ENST00000440711 C11orf95C9JLR9 678 aaPredicted RBP13□□□□□ -0.33
LINC01006-205ENST00000440711 CDCA8Q53HL2 280 aa13□□□□□ -0.33
LINC01006-205ENST00000440711 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
LINC01006-205ENST00000440711 PLCH1Q4KWH8 1693 aa12.99□□□□□ -0.33
LINC01006-205ENST00000440711 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
LINC01006-205ENST00000440711 TMF1P82094 1093 aa12.99□□□□□ -0.33
LINC01006-205ENST00000440711 PDE3BQ13370 1112 aa12.99□□□□□ -0.33
LINC01006-205ENST00000440711 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
LINC01006-205ENST00000440711 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
LINC01006-205ENST00000440711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC01006-205ENST00000440711 CRYBG1Q9Y4K1 1723 aa12.98□□□□□ -0.33
LINC01006-205ENST00000440711 CAMTA1Q9Y6Y1 1673 aa12.98□□□□□ -0.33
LINC01006-205ENST00000440711 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
LINC01006-205ENST00000440711 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
LINC01006-205ENST00000440711 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
LINC01006-205ENST00000440711 BAG6P46379 1132 aa12.96□□□□□ -0.33
LINC01006-205ENST00000440711 TOM1L2Q6ZVM7 507 aa12.96□□□□□ -0.33
LINC01006-205ENST00000440711 SLIT3O75094 1523 aa12.96□□□□□ -0.33
LINC01006-205ENST00000440711 NRAPQ86VF7 1730 aa12.96□□□□□ -0.34
LINC01006-205ENST00000440711 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
LINC01006-205ENST00000440711 CARD10Q9BWT7 1032 aa12.95□□□□□ -0.34
LINC01006-205ENST00000440711 CRB1P82279 1406 aa12.95□□□□□ -0.34
LINC01006-205ENST00000440711 EDC4Q6P2E9 1401 aaKnown RBP12.95□□□□□ -0.34
LINC01006-205ENST00000440711 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
LINC01006-205ENST00000440711 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
LINC01006-205ENST00000440711 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms