RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 KDM2AQ9Y2K7 1162 aa7.21□□□□□ -1.26
LINC01549-201ENST00000440664 TLL2Q9Y6L7 1015 aa7.21□□□□□ -1.26
LINC01549-201ENST00000440664 SEMA3EO15041 775 aa7.2□□□□□ -1.26
LINC01549-201ENST00000440664 Q3C1V9 767 aa7.2□□□□□ -1.26
LINC01549-201ENST00000440664 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
LINC01549-201ENST00000440664 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
LINC01549-201ENST00000440664 CNTNAP5Q8WYK1 1306 aa7.19□□□□□ -1.26
LINC01549-201ENST00000440664 BMP2P12643 396 aa7.18□□□□□ -1.26
LINC01549-201ENST00000440664 LYPD4Q6UWN0 246 aa7.18□□□□□ -1.26
LINC01549-201ENST00000440664 ENAMQ9NRM1 1142 aa7.18□□□□□ -1.26
LINC01549-201ENST00000440664 TESPA1A2RU30 521 aaPredicted RBP7.17□□□□□ -1.26
LINC01549-201ENST00000440664 DDX11L8A8MPP1 907 aa7.17□□□□□ -1.26
LINC01549-201ENST00000440664 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
LINC01549-201ENST00000440664 PXYLP1Q8TE99 480 aa7.17□□□□□ -1.26
LINC01549-201ENST00000440664 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
LINC01549-201ENST00000440664 USB1Q9BQ65 265 aaKnown RBP7.17□□□□□ -1.26
LINC01549-201ENST00000440664 DNMT3LQ9UJW3 386 aa7.17□□□□□ -1.26
LINC01549-201ENST00000440664 PLEKHG3A1L390 1219 aa7.16□□□□□ -1.26
LINC01549-201ENST00000440664 UPP2O95045 317 aa7.16□□□□□ -1.26
LINC01549-201ENST00000440664 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
LINC01549-201ENST00000440664 BEND7Q8N7W2 519 aaPredicted RBP7.16□□□□□ -1.26
LINC01549-201ENST00000440664 GOLGA2P5Q9HBQ8 144 aa7.16□□□□□ -1.26
LINC01549-201ENST00000440664 OATP04181 439 aa7.15□□□□□ -1.26
LINC01549-201ENST00000440664 GCGRP47871 477 aa7.15□□□□□ -1.26
LINC01549-201ENST00000440664 VSIG10Q8N0Z9 540 aa7.15□□□□□ -1.26
LINC01549-201ENST00000440664 CDC14CA4D256 554 aa7.13□□□□□ -1.27
LINC01549-201ENST00000440664 PTSQ03393 145 aa7.13□□□□□ -1.27
LINC01549-201ENST00000440664 CELA2BP08218 269 aaPredicted RBP7.12□□□□□ -1.27
LINC01549-201ENST00000440664 SH3BP2P78314 561 aa7.12□□□□□ -1.27
LINC01549-201ENST00000440664 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.12□□□□□ -1.27
LINC01549-201ENST00000440664 ZMYM1Q5SVZ6 1142 aa7.12□□□□□ -1.27
LINC01549-201ENST00000440664 SOS2Q07890 1332 aaPredicted RBP7.11□□□□□ -1.27
LINC01549-201ENST00000440664 FCHSD2O94868 740 aa7.11□□□□□ -1.27
LINC01549-201ENST00000440664 ZIC2O95409 532 aaPredicted RBP7.11□□□□□ -1.27
LINC01549-201ENST00000440664 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
LINC01549-201ENST00000440664 LINC00528Q8N1L1 170 aa7.11□□□□□ -1.27
LINC01549-201ENST00000440664 VWA5B2Q8N398 1253 aa7.11□□□□□ -1.27
LINC01549-201ENST00000440664 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
LINC01549-201ENST00000440664 SCO2A0A1W2PP80 73 aa7.1□□□□□ -1.27
LINC01549-201ENST00000440664 NUTM2FA1L443 756 aa7.1□□□□□ -1.27
LINC01549-201ENST00000440664 LCE1DQ5T752 114 aa7.1□□□□□ -1.27
LINC01549-201ENST00000440664 METTL3Q86U44 580 aaKnown RBP7.1□□□□□ -1.27
LINC01549-201ENST00000440664 CCDC155Q8N6L0 562 aa7.1□□□□□ -1.27
LINC01549-201ENST00000440664 KLF16Q9BXK1 252 aaPredicted RBP7.1□□□□□ -1.27
LINC01549-201ENST00000440664 DAXXQ9UER7 740 aaPredicted RBP7.1□□□□□ -1.27
LINC01549-201ENST00000440664 GPR37O15354 613 aa7.09□□□□□ -1.27
LINC01549-201ENST00000440664 RBM26Q5T8P6 1007 aaKnown RBP7.09□□□□□ -1.27
LINC01549-201ENST00000440664 PTCRAQ6ISU1 281 aaPredicted RBP7.09□□□□□ -1.27
LINC01549-201ENST00000440664 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
LINC01549-201ENST00000440664 NEDD1Q8NHV4 660 aa7.08□□□□□ -1.28
LINC01549-201ENST00000440664 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
LINC01549-201ENST00000440664 HIC1Q14526 733 aa7.07□□□□□ -1.28
LINC01549-201ENST00000440664 SULF1Q8IWU6 871 aa7.07□□□□□ -1.28
LINC01549-201ENST00000440664 ITPKCQ96DU7 683 aa7.07□□□□□ -1.28
LINC01549-201ENST00000440664 SH3RF1Q7Z6J0 888 aa7.06□□□□□ -1.28
LINC01549-201ENST00000440664 NUDT12Q9BQG2 462 aa7.06□□□□□ -1.28
LINC01549-201ENST00000440664 KRBA1A5PL33 1030 aa7.05□□□□□ -1.28
LINC01549-201ENST00000440664 COBLO75128 1261 aa7.05□□□□□ -1.28
LINC01549-201ENST00000440664 LINC01559Q495D7 138 aa7.05□□□□□ -1.28
LINC01549-201ENST00000440664 MPNDQ8N594 471 aa7.05□□□□□ -1.28
LINC01549-201ENST00000440664 TTLL8A6PVC2 850 aa7.04□□□□□ -1.28
LINC01549-201ENST00000440664 JUNDP17535 347 aa7.04□□□□□ -1.28
LINC01549-201ENST00000440664 ITGA6P23229 1130 aa7.04□□□□□ -1.28
LINC01549-201ENST00000440664 VARSP26640 1264 aaKnown RBP7.04□□□□□ -1.28
LINC01549-201ENST00000440664 GNPATO15228 680 aa7.03□□□□□ -1.28
LINC01549-201ENST00000440664 MEIOBQ8N635 442 aa7.03□□□□□ -1.28
LINC01549-201ENST00000440664 FIGNL2A6NMB9 653 aa7.02□□□□□ -1.29
LINC01549-201ENST00000440664 SEMA6BQ9H3T3 888 aa7.02□□□□□ -1.29
LINC01549-201ENST00000440664 ITGB7P26010 798 aa7.01□□□□□ -1.29
LINC01549-201ENST00000440664 ARID5BQ14865 1188 aa7□□□□□ -1.29
LINC01549-201ENST00000440664 NLRP7Q8WX94 980 aa7□□□□□ -1.29
LINC01549-201ENST00000440664 NBPF11Q86T75 865 aa6.99□□□□□ -1.29
LINC01549-201ENST00000440664 GPIHBP1Q8IV16 184 aa6.99□□□□□ -1.29
LINC01549-201ENST00000440664 BAP1Q92560 729 aa6.99□□□□□ -1.29
LINC01549-201ENST00000440664 SLC35F4A4IF30 521 aa6.98□□□□□ -1.29
LINC01549-201ENST00000440664 TSEN34Q9BSV6 310 aaKnown RBP6.98□□□□□ -1.29
LINC01549-201ENST00000440664 FAM174AQ8TBP5 190 aa6.97□□□□□ -1.29
LINC01549-201ENST00000440664 UNC93B1Q9H1C4 597 aa6.97□□□□□ -1.29
LINC01549-201ENST00000440664 SPTLC1O15269 473 aa6.96□□□□□ -1.3
LINC01549-201ENST00000440664 NR3C2P08235 984 aa6.96□□□□□ -1.3
LINC01549-201ENST00000440664 BCRP11274 1271 aa6.96□□□□□ -1.3
LINC01549-201ENST00000440664 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
LINC01549-201ENST00000440664 ZFP64Q9NPA5 681 aa6.96□□□□□ -1.3
LINC01549-201ENST00000440664 GAS6Q14393 721 aa6.95□□□□□ -1.3
LINC01549-201ENST00000440664 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
LINC01549-201ENST00000440664 PHOX2BQ99453 314 aa6.95□□□□□ -1.3
LINC01549-201ENST00000440664 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
LINC01549-201ENST00000440664 TULP1O00294 542 aaPredicted RBP6.94□□□□□ -1.3
LINC01549-201ENST00000440664 CCNYL3P0C7X3 344 aa6.94□□□□□ -1.3
LINC01549-201ENST00000440664 NR5A1Q13285 461 aa6.94□□□□□ -1.3
LINC01549-201ENST00000440664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC01549-201ENST00000440664 HLA-CQ95604 372 aa6.93□□□□□ -1.3
LINC01549-201ENST00000440664 KDM4AO75164 1064 aa6.92□□□□□ -1.3
LINC01549-201ENST00000440664 MAP2K5Q13163 448 aa6.92□□□□□ -1.3
LINC01549-201ENST00000440664 ARTNQ5T4W7 220 aa6.91□□□□□ -1.3
LINC01549-201ENST00000440664 CDK15Q96Q40 435 aa6.91□□□□□ -1.3
LINC01549-201ENST00000440664 KRTAP4-2Q9BYR5 136 aa6.91□□□□□ -1.3
LINC01549-201ENST00000440664 IGF1RP08069 1367 aa6.91□□□□□ -1.3
LINC01549-201ENST00000440664 IRF6O14896 467 aa6.9□□□□□ -1.3
LINC01549-201ENST00000440664 MS4A1P11836 297 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms