RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 CD2BP2O95400 341 aaKnown RBP10.27□□□□□ -0.77
CHD6-204ENST00000440647 ZNF787Q6DD87 383 aa10.27□□□□□ -0.77
CHD6-204ENST00000440647 EMID1Q96A84 441 aaPredicted RBP10.27□□□□□ -0.77
CHD6-204ENST00000440647 TBC1D2Q9BYX2 928 aa10.27□□□□□ -0.77
CHD6-204ENST00000440647 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
CHD6-204ENST00000440647 MOXD2PA6NHM9 499 aa10.26□□□□□ -0.77
CHD6-204ENST00000440647 FDX1P10109 184 aa10.26□□□□□ -0.77
CHD6-204ENST00000440647 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
CHD6-204ENST00000440647 NDUFV2P19404 249 aa10.25□□□□□ -0.77
CHD6-204ENST00000440647 RPIAP49247 311 aa10.25□□□□□ -0.77
CHD6-204ENST00000440647 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
CHD6-204ENST00000440647 MSS51Q4VC12 460 aa10.25□□□□□ -0.77
CHD6-204ENST00000440647 USB1Q9BQ65 265 aaKnown RBP10.25□□□□□ -0.77
CHD6-204ENST00000440647 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
CHD6-204ENST00000440647 PCDHGC3Q9UN70 934 aa10.24□□□□□ -0.77
CHD6-204ENST00000440647 CUL7Q14999 1698 aa10.24□□□□□ -0.77
CHD6-204ENST00000440647 GJA5P36382 358 aa10.23□□□□□ -0.77
CHD6-204ENST00000440647 GDF9O60383 454 aa10.22□□□□□ -0.77
CHD6-204ENST00000440647 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
CHD6-204ENST00000440647 GPBP1L1Q9HC44 474 aaPredicted RBP10.22□□□□□ -0.77
CHD6-204ENST00000440647 KIF13AQ9H1H9 1805 aa10.21□□□□□ -0.77
CHD6-204ENST00000440647 ZBTB24O43167 697 aaPredicted RBP10.21□□□□□ -0.77
CHD6-204ENST00000440647 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
CHD6-204ENST00000440647 PRDM9Q9NQV7 894 aa10.21□□□□□ -0.77
CHD6-204ENST00000440647 KIF27Q86VH2 1401 aa10.21□□□□□ -0.78
CHD6-204ENST00000440647 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
CHD6-204ENST00000440647 SPTLC1O15269 473 aa10.2□□□□□ -0.78
CHD6-204ENST00000440647 MMP16P51512 607 aa10.2□□□□□ -0.78
CHD6-204ENST00000440647 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
CHD6-204ENST00000440647 RSBN1LQ6PCB5 846 aaPredicted RBP10.2□□□□□ -0.78
CHD6-204ENST00000440647 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
CHD6-204ENST00000440647 C6orf229H3BNL8 230 aa10.19□□□□□ -0.78
CHD6-204ENST00000440647 TNFRSF10AO00220 468 aa10.19□□□□□ -0.78
CHD6-204ENST00000440647 RIC3Q7Z5B4 369 aa10.19□□□□□ -0.78
CHD6-204ENST00000440647 FCF1Q9Y324 198 aaKnown RBP10.19□□□□□ -0.78
CHD6-204ENST00000440647 MYT1Q01538 1121 aa10.18□□□□□ -0.78
CHD6-204ENST00000440647 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
CHD6-204ENST00000440647 RSPH6AQ9H0K4 717 aa10.18□□□□□ -0.78
CHD6-204ENST00000440647 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
CHD6-204ENST00000440647 FOXC1Q12948 553 aa10.17□□□□□ -0.78
CHD6-204ENST00000440647 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
CHD6-204ENST00000440647 SPDYE5A6NIY4 337 aa10.16□□□□□ -0.78
CHD6-204ENST00000440647 MTMR2Q13614 643 aa10.16□□□□□ -0.78
CHD6-204ENST00000440647 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
CHD6-204ENST00000440647 FAM117AQ9C073 453 aa10.16□□□□□ -0.78
CHD6-204ENST00000440647 PCDHB15Q9Y5E8 787 aa10.16□□□□□ -0.78
CHD6-204ENST00000440647 ADCY10Q96PN6 1610 aa10.15□□□□□ -0.78
CHD6-204ENST00000440647 MAPKBP1O60336 1514 aa10.15□□□□□ -0.78
CHD6-204ENST00000440647 IGF1RP08069 1367 aa10.14□□□□□ -0.79
CHD6-204ENST00000440647 JUNDP17535 347 aa10.14□□□□□ -0.79
CHD6-204ENST00000440647 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
CHD6-204ENST00000440647 CYP4X1Q8N118 509 aa10.14□□□□□ -0.79
CHD6-204ENST00000440647 ABCC10Q5T3U5 1492 aa10.13□□□□□ -0.79
CHD6-204ENST00000440647 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
CHD6-204ENST00000440647 PRPF38BQ5VTL8 546 aaKnown RBP10.13□□□□□ -0.79
CHD6-204ENST00000440647 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
CHD6-204ENST00000440647 LIMD1Q9UGP4 676 aa10.13□□□□□ -0.79
CHD6-204ENST00000440647 DIP2BQ9P265 1576 aa10.13□□□□□ -0.79
CHD6-204ENST00000440647 HRCP23327 699 aa10.12□□□□□ -0.79
CHD6-204ENST00000440647 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
CHD6-204ENST00000440647 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
CHD6-204ENST00000440647 ZBTB3Q9H5J0 574 aa10.12□□□□□ -0.79
CHD6-204ENST00000440647 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
CHD6-204ENST00000440647 IQGAP2Q13576 1575 aa10.11□□□□□ -0.79
CHD6-204ENST00000440647 CLK2P49760 499 aaKnown RBP10.11□□□□□ -0.79
CHD6-204ENST00000440647 POLR3EQ9NVU0 708 aa10.11□□□□□ -0.79
CHD6-204ENST00000440647 CARMIL2Q6F5E8 1435 aa10.1□□□□□ -0.79
CHD6-204ENST00000440647 PLEKHG3A1L390 1219 aa10.1□□□□□ -0.79
CHD6-204ENST00000440647 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
CHD6-204ENST00000440647 TSPOAP1O95153 1857 aa10.1□□□□□ -0.79
CHD6-204ENST00000440647 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
CHD6-204ENST00000440647 BRPF1P55201 1214 aaPredicted RBP10.09□□□□□ -0.79
CHD6-204ENST00000440647 SKIV2LQ15477 1246 aaKnown RBP10.09□□□□□ -0.79
CHD6-204ENST00000440647 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
CHD6-204ENST00000440647 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
CHD6-204ENST00000440647 KDM6BO15054 1643 aa10.08□□□□□ -0.8
CHD6-204ENST00000440647 TTC24A2A3L6 582 aaPredicted RBP10.08□□□□□ -0.8
CHD6-204ENST00000440647 LILRB3O75022 631 aa10.08□□□□□ -0.8
CHD6-204ENST00000440647 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
CHD6-204ENST00000440647 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
CHD6-204ENST00000440647 TOR4AQ9NXH8 423 aa10.08□□□□□ -0.8
CHD6-204ENST00000440647 PTPRGP23470 1445 aa10.07□□□□□ -0.8
CHD6-204ENST00000440647 TNIKQ9UKE5 1360 aa10.07□□□□□ -0.8
CHD6-204ENST00000440647 NUTM2BA6NNL0 878 aaPredicted RBP10.07□□□□□ -0.8
CHD6-204ENST00000440647 NUTM2EB1AL46 878 aaPredicted RBP10.07□□□□□ -0.8
CHD6-204ENST00000440647 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
CHD6-204ENST00000440647 QPCTQ16769 361 aa10.07□□□□□ -0.8
CHD6-204ENST00000440647 NUTM2DQ5VT03 806 aaPredicted RBP10.07□□□□□ -0.8
CHD6-204ENST00000440647 NUTM2AQ8IVF1 878 aaPredicted RBP10.07□□□□□ -0.8
CHD6-204ENST00000440647 NUDT12Q9BQG2 462 aa10.07□□□□□ -0.8
CHD6-204ENST00000440647 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
CHD6-204ENST00000440647 CFAP99D6REC4 459 aa10.06□□□□□ -0.8
CHD6-204ENST00000440647 PTPRNQ16849 979 aa10.06□□□□□ -0.8
CHD6-204ENST00000440647 CTC1Q2NKJ3 1217 aa10.06□□□□□ -0.8
CHD6-204ENST00000440647 CRIPAKQ8N1N5 446 aa10.06□□□□□ -0.8
CHD6-204ENST00000440647 ZNF775Q96BV0 537 aaPredicted RBP10.06□□□□□ -0.8
CHD6-204ENST00000440647 WNT7AO00755 349 aa10.05□□□□□ -0.8
CHD6-204ENST00000440647 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
CHD6-204ENST00000440647 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
CHD6-204ENST00000440647 AXIN1O15169 862 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms