RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
COL16A1-204ENST00000440437 SIN3AQ96ST3 1273 aa24.3■■□□□ 1.48
COL16A1-204ENST00000440437 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
COL16A1-204ENST00000440437 EP400Q96L91 3159 aa24.29■■□□□ 1.48
COL16A1-204ENST00000440437 CENPJQ9HC77 1338 aaPredicted RBP24.27■■□□□ 1.48
COL16A1-204ENST00000440437 VPS72Q15906 364 aa24.26■■□□□ 1.47
COL16A1-204ENST00000440437 FAM83GA6ND36 823 aa24.25■■□□□ 1.47
COL16A1-204ENST00000440437 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
COL16A1-204ENST00000440437 PLEKHG3A1L390 1219 aa24.23■■□□□ 1.47
COL16A1-204ENST00000440437 PAK3O75914 559 aaPredicted RBP24.23■■□□□ 1.47
COL16A1-204ENST00000440437 ACEP12821 1306 aa24.23■■□□□ 1.47
COL16A1-204ENST00000440437 NRKQ7Z2Y5 1582 aa24.2■■□□□ 1.47
COL16A1-204ENST00000440437 PPIP5K1Q6PFW1 1433 aa24.2■■□□□ 1.46
COL16A1-204ENST00000440437 NEUROD1Q13562 356 aa24.2■■□□□ 1.46
COL16A1-204ENST00000440437 NBPF8Q3BBV2 869 aa24.19■■□□□ 1.46
COL16A1-204ENST00000440437 BTG4Q9NY30 223 aa24.18■■□□□ 1.46
COL16A1-204ENST00000440437 ONECUT3O60422 494 aaPredicted RBP24.17■■□□□ 1.46
COL16A1-204ENST00000440437 SRPK2P78362 688 aaKnown RBP24.17■■□□□ 1.46
COL16A1-204ENST00000440437 ROCK2O75116 1388 aaKnown RBP24.16■■□□□ 1.46
COL16A1-204ENST00000440437 CABP2Q9NPB3 220 aa24.16■■□□□ 1.46
COL16A1-204ENST00000440437 SEPT12Q8IYM1 358 aa24.15■■□□□ 1.46
COL16A1-204ENST00000440437 CCDC9Q9Y3X0 531 aaKnown RBP24.15■■□□□ 1.46
COL16A1-204ENST00000440437 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
COL16A1-204ENST00000440437 KIAA0232Q92628 1395 aa24.14■■□□□ 1.45
COL16A1-204ENST00000440437 PRDM11Q9NQV5 511 aa24.13■■□□□ 1.45
COL16A1-204ENST00000440437 LMO7Q8WWI1 1683 aa24.13■■□□□ 1.45
COL16A1-204ENST00000440437 AKAP12Q02952 1782 aa24.13■■□□□ 1.45
COL16A1-204ENST00000440437 CCDC125Q86Z20 511 aa24.12■■□□□ 1.45
COL16A1-204ENST00000440437 USP19O94966 1318 aa24.11■■□□□ 1.45
COL16A1-204ENST00000440437 NUTM2GQ5VZR2 741 aa24.11■■□□□ 1.45
COL16A1-204ENST00000440437 BRD4O60885 1362 aaPredicted RBP24.11■■□□□ 1.45
COL16A1-204ENST00000440437 USP6P35125 1406 aa24.1■■□□□ 1.45
COL16A1-204ENST00000440437 BLMP54132 1417 aaPredicted RBP24.1■■□□□ 1.45
COL16A1-204ENST00000440437 SPATA31A5Q5VU36 1347 aa24.1■■□□□ 1.45
COL16A1-204ENST00000440437 SPATA31A7Q8IWB4 1347 aa24.1■■□□□ 1.45
COL16A1-204ENST00000440437 PIK3C2AO00443 1686 aa24.09■■□□□ 1.45
COL16A1-204ENST00000440437 EVC2Q86UK5 1308 aa24.09■■□□□ 1.45
COL16A1-204ENST00000440437 ABTB2Q8N961 1025 aa24.08■■□□□ 1.45
COL16A1-204ENST00000440437 CHRNA2Q15822 529 aa24.07■■□□□ 1.44
COL16A1-204ENST00000440437 FAM98CQ17RN3 349 aaKnown RBP24.07■■□□□ 1.44
COL16A1-204ENST00000440437 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
COL16A1-204ENST00000440437 SSH2Q76I76 1423 aa24.07■■□□□ 1.44
COL16A1-204ENST00000440437 CPDO75976 1380 aa24.06■■□□□ 1.44
COL16A1-204ENST00000440437 SLIT3O75094 1523 aa24.06■■□□□ 1.44
COL16A1-204ENST00000440437 ZC3H6P61129 1189 aaKnown RBP24.06■■□□□ 1.44
COL16A1-204ENST00000440437 KRT27Q7Z3Y8 459 aa24.06■■□□□ 1.44
COL16A1-204ENST00000440437 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
COL16A1-204ENST00000440437 SBNO2Q9Y2G9 1366 aa24.04■■□□□ 1.44
COL16A1-204ENST00000440437 NLRP13Q86W25 1043 aa24.03■■□□□ 1.44
COL16A1-204ENST00000440437 MON2Q7Z3U7 1717 aa24.03■■□□□ 1.44
COL16A1-204ENST00000440437 SPATA31A1Q5TZJ5 1347 aa24.03■■□□□ 1.44
COL16A1-204ENST00000440437 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
COL16A1-204ENST00000440437 A0A0G2JS52 829 aa24.02■■□□□ 1.44
COL16A1-204ENST00000440437 MYT1Q01538 1121 aa24.02■■□□□ 1.44
COL16A1-204ENST00000440437 RGPD1P0DJD0 1748 aa24.01■■□□□ 1.43
COL16A1-204ENST00000440437 TRIM26Q12899 539 aaPredicted RBP24.01■■□□□ 1.43
COL16A1-204ENST00000440437 GCP02774 474 aa24■■□□□ 1.43
COL16A1-204ENST00000440437 COL18A1P39060 1754 aa23.99■■□□□ 1.43
COL16A1-204ENST00000440437 STRN4Q9NRL3 753 aa23.99■■□□□ 1.43
COL16A1-204ENST00000440437 CPSF1Q10570 1443 aaKnown RBP23.99■■□□□ 1.43
COL16A1-204ENST00000440437 TNS1Q9HBL0 1735 aaKnown RBP23.98■■□□□ 1.43
COL16A1-204ENST00000440437 COL5A2P05997 1499 aaPredicted RBP23.97■■□□□ 1.43
COL16A1-204ENST00000440437 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
COL16A1-204ENST00000440437 USP54Q70EL1 1684 aa23.95■■□□□ 1.43
COL16A1-204ENST00000440437 NLRP6P59044 892 aa23.95■■□□□ 1.42
COL16A1-204ENST00000440437 DEFB132Q7Z7B7 95 aa23.95■■□□□ 1.42
COL16A1-204ENST00000440437 PARP4Q9UKK3 1724 aaKnown RBP23.94■■□□□ 1.42
COL16A1-204ENST00000440437 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
COL16A1-204ENST00000440437 TTC21BQ7Z4L5 1316 aa23.93■■□□□ 1.42
COL16A1-204ENST00000440437 SF3B2Q13435 895 aaKnown RBP23.93■■□□□ 1.42
COL16A1-204ENST00000440437 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
COL16A1-204ENST00000440437 WNK3Q9BYP7 1800 aa23.93■■□□□ 1.42
COL16A1-204ENST00000440437 RGPD5Q99666 1765 aa23.93■■□□□ 1.42
COL16A1-204ENST00000440437 LARP1Q6PKG0 1096 aaKnown RBP23.92■■□□□ 1.42
COL16A1-204ENST00000440437 BARGINQ6ZT62 677 aa23.92■■□□□ 1.42
COL16A1-204ENST00000440437 CD163L1Q9NR16 1453 aa23.92■■□□□ 1.42
COL16A1-204ENST00000440437 AATKQ6ZMQ8 1374 aa23.91■■□□□ 1.42
COL16A1-204ENST00000440437 TTC21AQ8NDW8 1320 aa23.91■■□□□ 1.42
COL16A1-204ENST00000440437 EVA1CP58658 441 aa23.91■■□□□ 1.42
COL16A1-204ENST00000440437 FAM182BQ5T319 152 aa23.91■■□□□ 1.42
COL16A1-204ENST00000440437 KTN1Q86UP2 1357 aaKnown RBP23.9■■□□□ 1.42
COL16A1-204ENST00000440437 NFAT5O94916 1531 aa23.89■■□□□ 1.42
COL16A1-204ENST00000440437 USP35Q9P2H5 1018 aa23.89■■□□□ 1.41
COL16A1-204ENST00000440437 CRB1P82279 1406 aa23.88■■□□□ 1.41
COL16A1-204ENST00000440437 DISP2A7MBM2 1401 aa23.87■■□□□ 1.41
COL16A1-204ENST00000440437 TCP11L2Q8N4U5 519 aa23.87■■□□□ 1.41
COL16A1-204ENST00000440437 LRRC37A3O60309 1634 aa23.86■■□□□ 1.41
COL16A1-204ENST00000440437 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
COL16A1-204ENST00000440437 ABCC6O95255 1503 aa23.85■■□□□ 1.41
COL16A1-204ENST00000440437 BAG6P46379 1132 aa23.85■■□□□ 1.41
COL16A1-204ENST00000440437 ZBTB7CA1YPR0 619 aa23.83■■□□□ 1.41
COL16A1-204ENST00000440437 ARHGEF25Q86VW2 580 aa23.83■■□□□ 1.41
COL16A1-204ENST00000440437 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
COL16A1-204ENST00000440437 LTN1O94822 1766 aa23.83■■□□□ 1.4
COL16A1-204ENST00000440437 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
COL16A1-204ENST00000440437 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
COL16A1-204ENST00000440437 SRCAPQ6ZRS2 3230 aa23.81■■□□□ 1.4
COL16A1-204ENST00000440437 FAM196AQ6ZSG2 479 aa23.81■■□□□ 1.4
COL16A1-204ENST00000440437 PUS7Q96PZ0 661 aaKnown RBP23.81■■□□□ 1.4
COL16A1-204ENST00000440437 TESK2Q96S53 571 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms