RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 BTG4Q9NY30 223 aa25.83■■□□□ 1.73
HDAC7-213ENST00000440293 TRPM3Q9HCF6 1732 aaPredicted RBP25.82■■□□□ 1.72
HDAC7-213ENST00000440293 PRR36Q9H6K5 1346 aa25.82■■□□□ 1.72
HDAC7-213ENST00000440293 HIRIP3Q9BW71 556 aaPredicted RBP25.81■■□□□ 1.72
HDAC7-213ENST00000440293 BAG6P46379 1132 aa25.8■■□□□ 1.72
HDAC7-213ENST00000440293 NGDNQ8NEJ9 315 aaKnown RBP25.8■■□□□ 1.72
HDAC7-213ENST00000440293 MINK1Q8N4C8 1332 aaPredicted RBP25.8■■□□□ 1.72
HDAC7-213ENST00000440293 ALS2Q96Q42 1657 aa25.8■■□□□ 1.72
HDAC7-213ENST00000440293 COL14A1Q05707 1796 aaKnown RBP25.79■■□□□ 1.72
HDAC7-213ENST00000440293 NBPF8Q3BBV2 869 aa25.79■■□□□ 1.72
HDAC7-213ENST00000440293 CCER1Q8TC90 406 aaPredicted RBP25.79■■□□□ 1.72
HDAC7-213ENST00000440293 PLEKHG5O94827 1062 aa25.78■■□□□ 1.72
HDAC7-213ENST00000440293 FAM98CQ17RN3 349 aaKnown RBP25.78■■□□□ 1.72
HDAC7-213ENST00000440293 SPATA31A5Q5VU36 1347 aa25.78■■□□□ 1.72
HDAC7-213ENST00000440293 SPATA31A7Q8IWB4 1347 aa25.78■■□□□ 1.72
HDAC7-213ENST00000440293 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
HDAC7-213ENST00000440293 KIAA1210Q9ULL0 1709 aa25.77■■□□□ 1.72
HDAC7-213ENST00000440293 A0A0G2JS52 829 aa25.75■■□□□ 1.71
HDAC7-213ENST00000440293 MYT1Q01538 1121 aa25.75■■□□□ 1.71
HDAC7-213ENST00000440293 TIMELESSQ9UNS1 1208 aa25.74■■□□□ 1.71
HDAC7-213ENST00000440293 ROCK2O75116 1388 aaKnown RBP25.72■■□□□ 1.71
HDAC7-213ENST00000440293 PAK3O75914 559 aaPredicted RBP25.72■■□□□ 1.71
HDAC7-213ENST00000440293 NUDT16Q96DE0 195 aaKnown RBP25.72■■□□□ 1.71
HDAC7-213ENST00000440293 PRDM11Q9NQV5 511 aa25.72■■□□□ 1.71
HDAC7-213ENST00000440293 ATP7BP35670 1465 aa25.7■■□□□ 1.7
HDAC7-213ENST00000440293 DISP2A7MBM2 1401 aa25.7■■□□□ 1.7
HDAC7-213ENST00000440293 LRP5O75197 1615 aa25.69■■□□□ 1.7
HDAC7-213ENST00000440293 SPATA31A1Q5TZJ5 1347 aa25.67■■□□□ 1.7
HDAC7-213ENST00000440293 CRYBG1Q9Y4K1 1723 aa25.67■■□□□ 1.7
HDAC7-213ENST00000440293 CCDC61Q9Y6R9 512 aa25.67■■□□□ 1.7
HDAC7-213ENST00000440293 POLR3AO14802 1390 aaPredicted RBP25.67■■□□□ 1.7
HDAC7-213ENST00000440293 CENPJQ9HC77 1338 aaPredicted RBP25.66■■□□□ 1.7
HDAC7-213ENST00000440293 PLEKHG3A1L390 1219 aa25.66■■□□□ 1.7
HDAC7-213ENST00000440293 ITSN1Q15811 1721 aa25.66■■□□□ 1.7
HDAC7-213ENST00000440293 THSD7AQ9UPZ6 1657 aa25.65■■□□□ 1.7
HDAC7-213ENST00000440293 CDK19Q9BWU1 502 aa25.65■■□□□ 1.7
HDAC7-213ENST00000440293 CARD11Q9BXL7 1154 aa25.65■■□□□ 1.7
HDAC7-213ENST00000440293 KIAA0232Q92628 1395 aa25.65■■□□□ 1.7
HDAC7-213ENST00000440293 FAM196AQ6ZSG2 479 aa25.64■■□□□ 1.7
HDAC7-213ENST00000440293 TRPM1Q7Z4N2 1603 aa25.63■■□□□ 1.69
HDAC7-213ENST00000440293 RGPD1P0DJD0 1748 aa25.63■■□□□ 1.69
HDAC7-213ENST00000440293 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
HDAC7-213ENST00000440293 EN1Q05925 392 aaPredicted RBP25.62■■□□□ 1.69
HDAC7-213ENST00000440293 BARGINQ6ZT62 677 aa25.62■■□□□ 1.69
HDAC7-213ENST00000440293 ACEP12821 1306 aa25.61■■□□□ 1.69
HDAC7-213ENST00000440293 PARD3Q8TEW0 1356 aa25.59■■□□□ 1.69
HDAC7-213ENST00000440293 BRD4O60885 1362 aaPredicted RBP25.58■■□□□ 1.69
HDAC7-213ENST00000440293 CPDO75976 1380 aa25.58■■□□□ 1.69
HDAC7-213ENST00000440293 PSDA5PKW4 1024 aaPredicted RBP25.57■■□□□ 1.68
HDAC7-213ENST00000440293 EVA1CP58658 441 aa25.56■■□□□ 1.68
HDAC7-213ENST00000440293 ZC3H6P61129 1189 aaKnown RBP25.56■■□□□ 1.68
HDAC7-213ENST00000440293 CHRNA2Q15822 529 aa25.56■■□□□ 1.68
HDAC7-213ENST00000440293 FAM182BQ5T319 152 aa25.56■■□□□ 1.68
HDAC7-213ENST00000440293 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
HDAC7-213ENST00000440293 C11orf95C9JLR9 678 aaPredicted RBP25.55■■□□□ 1.68
HDAC7-213ENST00000440293 ABTB2Q8N961 1025 aa25.55■■□□□ 1.68
HDAC7-213ENST00000440293 CAMKK2Q96RR4 588 aa25.55■■□□□ 1.68
HDAC7-213ENST00000440293 STRN4Q9NRL3 753 aa25.55■■□□□ 1.68
HDAC7-213ENST00000440293 PHRF1Q9P1Y6 1649 aaKnown RBP25.55■■□□□ 1.68
HDAC7-213ENST00000440293 USP19O94966 1318 aa25.54■■□□□ 1.68
HDAC7-213ENST00000440293 SSH2Q76I76 1423 aa25.54■■□□□ 1.68
HDAC7-213ENST00000440293 TOPAZ1Q8N9V7 1692 aa25.53■■□□□ 1.68
HDAC7-213ENST00000440293 SRPK2P78362 688 aaKnown RBP25.53■■□□□ 1.68
HDAC7-213ENST00000440293 NLRP13Q86W25 1043 aa25.53■■□□□ 1.68
HDAC7-213ENST00000440293 PDE3BQ13370 1112 aa25.52■■□□□ 1.68
HDAC7-213ENST00000440293 TCP11L2Q8N4U5 519 aa25.52■■□□□ 1.68
HDAC7-213ENST00000440293 TRIM37O94972 964 aa25.51■■□□□ 1.67
HDAC7-213ENST00000440293 R3HDM1Q15032 1099 aaKnown RBP25.51■■□□□ 1.67
HDAC7-213ENST00000440293 EZH2Q15910 746 aaKnown RBP25.51■■□□□ 1.67
HDAC7-213ENST00000440293 NUTM2GQ5VZR2 741 aa25.51■■□□□ 1.67
HDAC7-213ENST00000440293 EVC2Q86UK5 1308 aa25.51■■□□□ 1.67
HDAC7-213ENST00000440293 TNS1Q9HBL0 1735 aaKnown RBP25.51■■□□□ 1.67
HDAC7-213ENST00000440293 CABP2Q9NPB3 220 aa25.5■■□□□ 1.67
HDAC7-213ENST00000440293 APBA3O96018 575 aa25.49■■□□□ 1.67
HDAC7-213ENST00000440293 GCP02774 474 aa25.48■■□□□ 1.67
HDAC7-213ENST00000440293 LARP1Q6PKG0 1096 aaKnown RBP25.47■■□□□ 1.67
HDAC7-213ENST00000440293 USP35Q9P2H5 1018 aa25.47■■□□□ 1.67
HDAC7-213ENST00000440293 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
HDAC7-213ENST00000440293 NRKQ7Z2Y5 1582 aa25.47■■□□□ 1.67
HDAC7-213ENST00000440293 LMO7Q8WWI1 1683 aa25.45■■□□□ 1.66
HDAC7-213ENST00000440293 PPIP5K1Q6PFW1 1433 aa25.45■■□□□ 1.66
HDAC7-213ENST00000440293 ST20-MTHFSA0A0A6YYL1 179 aa25.43■■□□□ 1.66
HDAC7-213ENST00000440293 SLC24A1O60721 1099 aa25.43■■□□□ 1.66
HDAC7-213ENST00000440293 NBPF14Q5TI25 921 aa25.43■■□□□ 1.66
HDAC7-213ENST00000440293 SBNO2Q9Y2G9 1366 aa25.43■■□□□ 1.66
HDAC7-213ENST00000440293 QRICH2Q9H0J4 1663 aa25.42■■□□□ 1.66
HDAC7-213ENST00000440293 AATKQ6ZMQ8 1374 aa25.4■■□□□ 1.66
HDAC7-213ENST00000440293 COL5A2P05997 1499 aaPredicted RBP25.4■■□□□ 1.66
HDAC7-213ENST00000440293 CRB1P82279 1406 aa25.39■■□□□ 1.66
HDAC7-213ENST00000440293 CABP1Q9NZU7 370 aa25.39■■□□□ 1.66
HDAC7-213ENST00000440293 USP6P35125 1406 aa25.37■■□□□ 1.65
HDAC7-213ENST00000440293 TESK2Q96S53 571 aa25.37■■□□□ 1.65
HDAC7-213ENST00000440293 USP47Q96K76 1375 aa25.36■■□□□ 1.65
HDAC7-213ENST00000440293 NLRP6P59044 892 aa25.36■■□□□ 1.65
HDAC7-213ENST00000440293 ZNF692Q9BU19 519 aaPredicted RBP25.36■■□□□ 1.65
HDAC7-213ENST00000440293 PARP4Q9UKK3 1724 aaKnown RBP25.35■■□□□ 1.65
HDAC7-213ENST00000440293 PUS7Q96PZ0 661 aaKnown RBP25.35■■□□□ 1.65
HDAC7-213ENST00000440293 RREB1Q92766 1687 aa25.34■■□□□ 1.65
HDAC7-213ENST00000440293 CDCA7Q9BWT1 371 aaPredicted RBP25.34■■□□□ 1.65
HDAC7-213ENST00000440293 SLIT3O75094 1523 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms