RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 CCDC9Q9Y3X0 531 aaKnown RBP23.13■■□□□ 1.29
ITGB1-207ENST00000439974 NBPF1Q3BBV0 1214 aa23.12■■□□□ 1.29
ITGB1-207ENST00000439974 CRYBG1Q9Y4K1 1723 aa23.11■■□□□ 1.29
ITGB1-207ENST00000439974 BRWD3Q6RI45 1802 aa23.11■■□□□ 1.29
ITGB1-207ENST00000439974 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
ITGB1-207ENST00000439974 COL14A1Q05707 1796 aaKnown RBP23.11■■□□□ 1.29
ITGB1-207ENST00000439974 NRAPQ86VF7 1730 aa23.11■■□□□ 1.29
ITGB1-207ENST00000439974 TOPAZ1Q8N9V7 1692 aa23.1■■□□□ 1.29
ITGB1-207ENST00000439974 ONECUT3O60422 494 aaPredicted RBP23.09■■□□□ 1.29
ITGB1-207ENST00000439974 L3MBTL2Q969R5 705 aa23.09■■□□□ 1.29
ITGB1-207ENST00000439974 BTG4Q9NY30 223 aa23.09■■□□□ 1.29
ITGB1-207ENST00000439974 CCDC61Q9Y6R9 512 aa23.09■■□□□ 1.29
ITGB1-207ENST00000439974 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.29
ITGB1-207ENST00000439974 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
ITGB1-207ENST00000439974 ACEP12821 1306 aa23.06■■□□□ 1.28
ITGB1-207ENST00000439974 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
ITGB1-207ENST00000439974 BLMP54132 1417 aaPredicted RBP23.05■■□□□ 1.28
ITGB1-207ENST00000439974 NBPF8Q3BBV2 869 aa23.04■■□□□ 1.28
ITGB1-207ENST00000439974 PRDM11Q9NQV5 511 aa23.04■■□□□ 1.28
ITGB1-207ENST00000439974 KRT27Q7Z3Y8 459 aa23.03■■□□□ 1.28
ITGB1-207ENST00000439974 PHRF1Q9P1Y6 1649 aaKnown RBP23.03■■□□□ 1.28
ITGB1-207ENST00000439974 A0A0G2JS52 829 aa23.02■■□□□ 1.28
ITGB1-207ENST00000439974 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
ITGB1-207ENST00000439974 MYT1Q01538 1121 aa23.02■■□□□ 1.28
ITGB1-207ENST00000439974 QRICH2Q9H0J4 1663 aa23.01■■□□□ 1.27
ITGB1-207ENST00000439974 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
ITGB1-207ENST00000439974 KIAA0232Q92628 1395 aa23.01■■□□□ 1.27
ITGB1-207ENST00000439974 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
ITGB1-207ENST00000439974 PPIP5K1Q6PFW1 1433 aa22.99■■□□□ 1.27
ITGB1-207ENST00000439974 NUTM2GQ5VZR2 741 aa22.99■■□□□ 1.27
ITGB1-207ENST00000439974 SPATA31A5Q5VU36 1347 aa22.99■■□□□ 1.27
ITGB1-207ENST00000439974 SPATA31A7Q8IWB4 1347 aa22.99■■□□□ 1.27
ITGB1-207ENST00000439974 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
ITGB1-207ENST00000439974 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
ITGB1-207ENST00000439974 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
ITGB1-207ENST00000439974 ZC3H6P61129 1189 aaKnown RBP22.96■■□□□ 1.27
ITGB1-207ENST00000439974 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
ITGB1-207ENST00000439974 ABTB2Q8N961 1025 aa22.96■■□□□ 1.27
ITGB1-207ENST00000439974 NRKQ7Z2Y5 1582 aa22.95■■□□□ 1.26
ITGB1-207ENST00000439974 BRD4O60885 1362 aaPredicted RBP22.94■■□□□ 1.26
ITGB1-207ENST00000439974 DEFB132Q7Z7B7 95 aa22.94■■□□□ 1.26
ITGB1-207ENST00000439974 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
ITGB1-207ENST00000439974 TONSLQ96HA7 1378 aa22.93■■□□□ 1.26
ITGB1-207ENST00000439974 USP19O94966 1318 aa22.93■■□□□ 1.26
ITGB1-207ENST00000439974 THSD7AQ9UPZ6 1657 aa22.93■■□□□ 1.26
ITGB1-207ENST00000439974 SPATA31A1Q5TZJ5 1347 aa22.92■■□□□ 1.26
ITGB1-207ENST00000439974 STRN4Q9NRL3 753 aa22.92■■□□□ 1.26
ITGB1-207ENST00000439974 SRCAPQ6ZRS2 3230 aa22.92■■□□□ 1.26
ITGB1-207ENST00000439974 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
ITGB1-207ENST00000439974 NLRP13Q86W25 1043 aa22.91■■□□□ 1.26
ITGB1-207ENST00000439974 CPDO75976 1380 aa22.9■■□□□ 1.26
ITGB1-207ENST00000439974 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
ITGB1-207ENST00000439974 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
ITGB1-207ENST00000439974 USP6P35125 1406 aa22.89■■□□□ 1.25
ITGB1-207ENST00000439974 SSH2Q76I76 1423 aa22.88■■□□□ 1.25
ITGB1-207ENST00000439974 GCP02774 474 aa22.87■■□□□ 1.25
ITGB1-207ENST00000439974 EVA1CP58658 441 aa22.87■■□□□ 1.25
ITGB1-207ENST00000439974 LMO7Q8WWI1 1683 aa22.87■■□□□ 1.25
ITGB1-207ENST00000439974 CAMTA1Q9Y6Y1 1673 aa22.87■■□□□ 1.25
ITGB1-207ENST00000439974 BAG6P46379 1132 aa22.86■■□□□ 1.25
ITGB1-207ENST00000439974 RGPD1P0DJD0 1748 aa22.85■■□□□ 1.25
ITGB1-207ENST00000439974 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
ITGB1-207ENST00000439974 NLRP6P59044 892 aa22.83■■□□□ 1.25
ITGB1-207ENST00000439974 USP35Q9P2H5 1018 aa22.83■■□□□ 1.25
ITGB1-207ENST00000439974 LARP1Q6PKG0 1096 aaKnown RBP22.82■■□□□ 1.24
ITGB1-207ENST00000439974 BARGINQ6ZT62 677 aa22.82■■□□□ 1.24
ITGB1-207ENST00000439974 SLIT3O75094 1523 aa22.82■■□□□ 1.24
ITGB1-207ENST00000439974 ZNF692Q9BU19 519 aaPredicted RBP22.8■■□□□ 1.24
ITGB1-207ENST00000439974 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
ITGB1-207ENST00000439974 COL5A2P05997 1499 aaPredicted RBP22.79■■□□□ 1.24
ITGB1-207ENST00000439974 TCP11L2Q8N4U5 519 aa22.79■■□□□ 1.24
ITGB1-207ENST00000439974 AKAP12Q02952 1782 aa22.78■■□□□ 1.24
ITGB1-207ENST00000439974 FAM196AQ6ZSG2 479 aa22.78■■□□□ 1.24
ITGB1-207ENST00000439974 TNS1Q9HBL0 1735 aaKnown RBP22.78■■□□□ 1.24
ITGB1-207ENST00000439974 THRAP3Q9Y2W1 955 aaKnown RBP22.78■■□□□ 1.24
ITGB1-207ENST00000439974 SBNO2Q9Y2G9 1366 aa22.77■■□□□ 1.24
ITGB1-207ENST00000439974 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
ITGB1-207ENST00000439974 ZBTB7CA1YPR0 619 aa22.77■■□□□ 1.24
ITGB1-207ENST00000439974 EN1Q05925 392 aaPredicted RBP22.77■■□□□ 1.24
ITGB1-207ENST00000439974 CARD11Q9BXL7 1154 aa22.77■■□□□ 1.24
ITGB1-207ENST00000439974 AATKQ6ZMQ8 1374 aa22.76■■□□□ 1.23
ITGB1-207ENST00000439974 PDE3BQ13370 1112 aa22.76■■□□□ 1.23
ITGB1-207ENST00000439974 TTC21BQ7Z4L5 1316 aa22.76■■□□□ 1.23
ITGB1-207ENST00000439974 CLSPNQ9HAW4 1339 aa22.76■■□□□ 1.23
ITGB1-207ENST00000439974 CRB1P82279 1406 aa22.74■■□□□ 1.23
ITGB1-207ENST00000439974 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
ITGB1-207ENST00000439974 TTC21AQ8NDW8 1320 aa22.74■■□□□ 1.23
ITGB1-207ENST00000439974 TRIM37O94972 964 aa22.73■■□□□ 1.23
ITGB1-207ENST00000439974 PARP4Q9UKK3 1724 aaKnown RBP22.72■■□□□ 1.23
ITGB1-207ENST00000439974 COL18A1P39060 1754 aa22.72■■□□□ 1.23
ITGB1-207ENST00000439974 KCNH5Q8NCM2 988 aa22.72■■□□□ 1.23
ITGB1-207ENST00000439974 KTN1Q86UP2 1357 aaKnown RBP22.72■■□□□ 1.23
ITGB1-207ENST00000439974 MON2Q7Z3U7 1717 aa22.71■■□□□ 1.23
ITGB1-207ENST00000439974 PSDA5PKW4 1024 aaPredicted RBP22.69■■□□□ 1.22
ITGB1-207ENST00000439974 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
ITGB1-207ENST00000439974 ARHGEF25Q86VW2 580 aa22.68■■□□□ 1.22
ITGB1-207ENST00000439974 APBA3O96018 575 aa22.67■■□□□ 1.22
ITGB1-207ENST00000439974 TOM1L2Q6ZVM7 507 aa22.67■■□□□ 1.22
ITGB1-207ENST00000439974 AXIN2Q9Y2T1 843 aa22.67■■□□□ 1.22
ITGB1-207ENST00000439974 LRP5O75197 1615 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms