RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
MCF2L-216ENST00000439475 ZNF692Q9BU19 519 aaPredicted RBP14.76□□□□□ -0.05
MCF2L-216ENST00000439475 BRD4O60885 1362 aaPredicted RBP14.75□□□□□ -0.05
MCF2L-216ENST00000439475 ATAD2Q6PL18 1390 aa14.74□□□□□ -0.05
MCF2L-216ENST00000439475 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
MCF2L-216ENST00000439475 ABTB2Q8N961 1025 aa14.74□□□□□ -0.05
MCF2L-216ENST00000439475 MARF1Q9Y4F3 1742 aaKnown RBP14.73□□□□□ -0.05
MCF2L-216ENST00000439475 NLRP13Q86W25 1043 aa14.73□□□□□ -0.05
MCF2L-216ENST00000439475 TRPM3Q9HCF6 1732 aaPredicted RBP14.72□□□□□ -0.05
MCF2L-216ENST00000439475 UNC5CLQ8IV45 518 aa14.72□□□□□ -0.05
MCF2L-216ENST00000439475 PUS7Q96PZ0 661 aaKnown RBP14.72□□□□□ -0.05
MCF2L-216ENST00000439475 TOPAZ1Q8N9V7 1692 aa14.71□□□□□ -0.05
MCF2L-216ENST00000439475 ST20-MTHFSA0A0A6YYL1 179 aa14.71□□□□□ -0.05
MCF2L-216ENST00000439475 TMC1Q8TDI8 760 aa14.7□□□□□ -0.06
MCF2L-216ENST00000439475 ALS2Q96Q42 1657 aa14.7□□□□□ -0.06
MCF2L-216ENST00000439475 FAM83GA6ND36 823 aa14.69□□□□□ -0.06
MCF2L-216ENST00000439475 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
MCF2L-216ENST00000439475 GJD4Q96KN9 370 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-216ENST00000439475 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-216ENST00000439475 NLRP6P59044 892 aa14.68□□□□□ -0.06
MCF2L-216ENST00000439475 TMF1P82094 1093 aa14.68□□□□□ -0.06
MCF2L-216ENST00000439475 HDGFL2Q7Z4V5 671 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-216ENST00000439475 PRDM11Q9NQV5 511 aa14.68□□□□□ -0.06
MCF2L-216ENST00000439475 CCDC9Q9Y3X0 531 aaKnown RBP14.68□□□□□ -0.06
MCF2L-216ENST00000439475 BCL9LQ86UU0 1499 aa14.68□□□□□ -0.06
MCF2L-216ENST00000439475 USP6P35125 1406 aa14.67□□□□□ -0.06
MCF2L-216ENST00000439475 SLIT2O94813 1529 aa14.67□□□□□ -0.06
MCF2L-216ENST00000439475 CDCA8Q53HL2 280 aa14.67□□□□□ -0.06
MCF2L-216ENST00000439475 ATRNO75882 1429 aa14.66□□□□□ -0.06
MCF2L-216ENST00000439475 USP47Q96K76 1375 aa14.66□□□□□ -0.06
MCF2L-216ENST00000439475 BTG4Q9NY30 223 aa14.66□□□□□ -0.06
MCF2L-216ENST00000439475 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
MCF2L-216ENST00000439475 TTC21AQ8NDW8 1320 aa14.66□□□□□ -0.06
MCF2L-216ENST00000439475 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.06
MCF2L-216ENST00000439475 ZC3H6P61129 1189 aaKnown RBP14.65□□□□□ -0.06
MCF2L-216ENST00000439475 VPS72Q15906 364 aa14.65□□□□□ -0.06
MCF2L-216ENST00000439475 TESK2Q96S53 571 aa14.65□□□□□ -0.06
MCF2L-216ENST00000439475 TTC21BQ7Z4L5 1316 aa14.65□□□□□ -0.06
MCF2L-216ENST00000439475 GCP02774 474 aa14.64□□□□□ -0.07
MCF2L-216ENST00000439475 SLC12A5Q9H2X9 1139 aa14.64□□□□□ -0.07
MCF2L-216ENST00000439475 ABCA3Q99758 1704 aa14.63□□□□□ -0.07
MCF2L-216ENST00000439475 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
MCF2L-216ENST00000439475 EVA1CP58658 441 aa14.63□□□□□ -0.07
MCF2L-216ENST00000439475 KCNH5Q8NCM2 988 aa14.63□□□□□ -0.07
MCF2L-216ENST00000439475 NWD2Q9ULI1 1742 aa14.63□□□□□ -0.07
MCF2L-216ENST00000439475 COL14A1Q05707 1796 aaKnown RBP14.62□□□□□ -0.07
MCF2L-216ENST00000439475 KIAA0232Q92628 1395 aa14.62□□□□□ -0.07
MCF2L-216ENST00000439475 NINLQ9Y2I6 1382 aa14.62□□□□□ -0.07
MCF2L-216ENST00000439475 CPSF1Q10570 1443 aaKnown RBP14.62□□□□□ -0.07
MCF2L-216ENST00000439475 USP19O94966 1318 aa14.62□□□□□ -0.07
MCF2L-216ENST00000439475 SSH2Q76I76 1423 aa14.61□□□□□ -0.07
MCF2L-216ENST00000439475 CHRNA2Q15822 529 aa14.61□□□□□ -0.07
MCF2L-216ENST00000439475 AKAP12Q02952 1782 aa14.6□□□□□ -0.07
MCF2L-216ENST00000439475 RGS12O14924 1447 aa14.6□□□□□ -0.07
MCF2L-216ENST00000439475 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
MCF2L-216ENST00000439475 PLCH1Q4KWH8 1693 aa14.59□□□□□ -0.07
MCF2L-216ENST00000439475 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
MCF2L-216ENST00000439475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.59□□□□□ -0.07
MCF2L-216ENST00000439475 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
MCF2L-216ENST00000439475 CPDO75976 1380 aa14.59□□□□□ -0.07
MCF2L-216ENST00000439475 PHRF1Q9P1Y6 1649 aaKnown RBP14.59□□□□□ -0.07
MCF2L-216ENST00000439475 CRYBG1Q9Y4K1 1723 aa14.58□□□□□ -0.07
MCF2L-216ENST00000439475 A0A0G2JS52 829 aa14.58□□□□□ -0.08
MCF2L-216ENST00000439475 MYT1Q01538 1121 aa14.58□□□□□ -0.08
MCF2L-216ENST00000439475 ONECUT3O60422 494 aaPredicted RBP14.57□□□□□ -0.08
MCF2L-216ENST00000439475 SEPT12Q8IYM1 358 aa14.57□□□□□ -0.08
MCF2L-216ENST00000439475 UPF1Q92900 1129 aaKnown RBP eCLIP14.57□□□□□ -0.08
MCF2L-216ENST00000439475 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
MCF2L-216ENST00000439475 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
MCF2L-216ENST00000439475 USP31Q70CQ4 1352 aa14.55□□□□□ -0.08
MCF2L-216ENST00000439475 EDC4Q6P2E9 1401 aaKnown RBP14.55□□□□□ -0.08
MCF2L-216ENST00000439475 MON2Q7Z3U7 1717 aa14.55□□□□□ -0.08
MCF2L-216ENST00000439475 SOX12O15370 315 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 FAM98CQ17RN3 349 aaKnown RBP14.54□□□□□ -0.08
MCF2L-216ENST00000439475 NME9Q86XW9 330 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 A0A1W2PP64 1363 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 GLI3P10071 1580 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 NRKQ7Z2Y5 1582 aa14.54□□□□□ -0.08
MCF2L-216ENST00000439475 NRAPQ86VF7 1730 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 PIK3C2AO00443 1686 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 SLIT3O75094 1523 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 AATKQ6ZMQ8 1374 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 ARHGEF25Q86VW2 580 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 CCDC125Q86Z20 511 aa14.53□□□□□ -0.08
MCF2L-216ENST00000439475 SPATA31A1Q5TZJ5 1347 aa14.52□□□□□ -0.08
MCF2L-216ENST00000439475 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
MCF2L-216ENST00000439475 KRT27Q7Z3Y8 459 aa14.52□□□□□ -0.09
MCF2L-216ENST00000439475 COG3Q96JB2 828 aa14.52□□□□□ -0.09
MCF2L-216ENST00000439475 POLR3GLQ9BT43 218 aa14.52□□□□□ -0.09
MCF2L-216ENST00000439475 USP35Q9P2H5 1018 aa14.52□□□□□ -0.09
MCF2L-216ENST00000439475 THRAP3Q9Y2W1 955 aaKnown RBP14.52□□□□□ -0.09
MCF2L-216ENST00000439475 LARP1Q6PKG0 1096 aaKnown RBP14.51□□□□□ -0.09
MCF2L-216ENST00000439475 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
MCF2L-216ENST00000439475 CAMTA1Q9Y6Y1 1673 aa14.5□□□□□ -0.09
MCF2L-216ENST00000439475 CSB-PGBD3P0DP91 1061 aa14.5□□□□□ -0.09
MCF2L-216ENST00000439475 BARGINQ6ZT62 677 aa14.5□□□□□ -0.09
MCF2L-216ENST00000439475 TOM1L2Q6ZVM7 507 aa14.5□□□□□ -0.09
MCF2L-216ENST00000439475 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms