RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RUFY2Q8WXA3 655 aa18.09■□□□□ 0.49
TSC2-206ENST00000439117 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
TSC2-206ENST00000439117 CDR1P51861 262 aa18.08■□□□□ 0.49
TSC2-206ENST00000439117 RNF214Q8ND24 703 aa18.08■□□□□ 0.49
TSC2-206ENST00000439117 G3V3G9 751 aa18.08■□□□□ 0.48
TSC2-206ENST00000439117 DCAF8Q5TAQ9 597 aa18.08■□□□□ 0.48
TSC2-206ENST00000439117 CAVIN1Q6NZI2 390 aaKnown RBP18.07■□□□□ 0.48
TSC2-206ENST00000439117 PTPN23Q9H3S7 1636 aa18.07■□□□□ 0.48
TSC2-206ENST00000439117 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
TSC2-206ENST00000439117 ERCC4Q92889 916 aaPredicted RBP18.06■□□□□ 0.48
TSC2-206ENST00000439117 RUFY1Q96T51 708 aa18.06■□□□□ 0.48
TSC2-206ENST00000439117 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
TSC2-206ENST00000439117 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
TSC2-206ENST00000439117 SMC3Q9UQE7 1217 aa18.06■□□□□ 0.48
TSC2-206ENST00000439117 ANKRD20A12PQ8NF67 263 aa18.06■□□□□ 0.48
TSC2-206ENST00000439117 H0YHG0 523 aa18.05■□□□□ 0.48
TSC2-206ENST00000439117 RDXP35241 583 aaKnown RBP18.05■□□□□ 0.48
TSC2-206ENST00000439117 PRKAR2BP31323 418 aa18.05■□□□□ 0.48
TSC2-206ENST00000439117 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
TSC2-206ENST00000439117 GAS2L2Q8NHY3 880 aa18.05■□□□□ 0.48
TSC2-206ENST00000439117 UQCRHLA0A096LP55 91 aa18.05■□□□□ 0.48
TSC2-206ENST00000439117 UQCRHP07919 91 aa18.05■□□□□ 0.48
TSC2-206ENST00000439117 TSPY26PQ9H489 355 aa18.04■□□□□ 0.48
TSC2-206ENST00000439117 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
TSC2-206ENST00000439117 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
TSC2-206ENST00000439117 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
TSC2-206ENST00000439117 CPLX2Q6PUV4 134 aaKnown RBP18.03■□□□□ 0.48
TSC2-206ENST00000439117 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
TSC2-206ENST00000439117 HOOK1Q9UJC3 728 aaKnown RBP18.03■□□□□ 0.48
TSC2-206ENST00000439117 PATL2C9JE40 543 aaKnown RBP18.02■□□□□ 0.48
TSC2-206ENST00000439117 VPS37CA5D8V6 355 aaPredicted RBP18.02■□□□□ 0.47
TSC2-206ENST00000439117 PDCL3Q9H2J4 239 aa18.02■□□□□ 0.47
TSC2-206ENST00000439117 ZSCAN30Q86W11 494 aa18.01■□□□□ 0.47
TSC2-206ENST00000439117 NAT10Q9H0A0 1025 aaKnown RBP18.01■□□□□ 0.47
TSC2-206ENST00000439117 CDC45O75419 566 aa18.01■□□□□ 0.47
TSC2-206ENST00000439117 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
TSC2-206ENST00000439117 MSH5O43196 834 aa18.01■□□□□ 0.47
TSC2-206ENST00000439117 PLEKHO1Q53GL0 409 aaPredicted RBP18■□□□□ 0.47
TSC2-206ENST00000439117 TOMM22Q9NS69 142 aa18■□□□□ 0.47
TSC2-206ENST00000439117 CCP110O43303 1012 aa18■□□□□ 0.47
TSC2-206ENST00000439117 PDCL2Q8N4E4 241 aa18■□□□□ 0.47
TSC2-206ENST00000439117 LNPKQ9C0E8 428 aa18■□□□□ 0.47
TSC2-206ENST00000439117 MCM4P33991 863 aa17.99■□□□□ 0.47
TSC2-206ENST00000439117 TRIM5Q9C035 493 aa17.99■□□□□ 0.47
TSC2-206ENST00000439117 RRP12Q5JTH9 1297 aaKnown RBP17.99■□□□□ 0.47
TSC2-206ENST00000439117 CCDC191Q8NCU4 936 aa17.99■□□□□ 0.47
TSC2-206ENST00000439117 MCM2P49736 904 aa17.99■□□□□ 0.47
TSC2-206ENST00000439117 RNF20Q5VTR2 975 aa17.99■□□□□ 0.47
TSC2-206ENST00000439117 FANCAO15360 1455 aa17.98■□□□□ 0.47
TSC2-206ENST00000439117 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
TSC2-206ENST00000439117 DHX8Q14562 1220 aaKnown RBP17.98■□□□□ 0.47
TSC2-206ENST00000439117 LRRFIP1Q32MZ4 808 aaKnown RBP17.98■□□□□ 0.47
TSC2-206ENST00000439117 CCDC112Q8NEF3 446 aa17.98■□□□□ 0.47
TSC2-206ENST00000439117 DENND4BO75064 1496 aaPredicted RBP17.98■□□□□ 0.47
TSC2-206ENST00000439117 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
TSC2-206ENST00000439117 CCDC61Q9Y6R9 512 aa17.98■□□□□ 0.47
TSC2-206ENST00000439117 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
TSC2-206ENST00000439117 IFIT2P09913 472 aaKnown RBP17.97■□□□□ 0.47
TSC2-206ENST00000439117 G3BP1Q13283 466 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSC2-206ENST00000439117 CDCA7LQ96GN5 454 aa17.97■□□□□ 0.47
TSC2-206ENST00000439117 PRPF40AO75400 957 aaKnown RBP17.97■□□□□ 0.47
TSC2-206ENST00000439117 RABEP1Q15276 862 aa17.97■□□□□ 0.47
TSC2-206ENST00000439117 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
TSC2-206ENST00000439117 SULT6B1Q6IMI4 303 aa17.96■□□□□ 0.47
TSC2-206ENST00000439117 PANK1Q8TE04 598 aa17.96■□□□□ 0.47
TSC2-206ENST00000439117 SMG6Q86US8 1419 aaKnown RBP17.96■□□□□ 0.47
TSC2-206ENST00000439117 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
TSC2-206ENST00000439117 TSPYL1Q9H0U9 437 aa17.95■□□□□ 0.46
TSC2-206ENST00000439117 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.95■□□□□ 0.46
TSC2-206ENST00000439117 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
TSC2-206ENST00000439117 USP8P40818 1118 aa17.95■□□□□ 0.46
TSC2-206ENST00000439117 AIMP1Q12904 312 aaKnown RBP17.95■□□□□ 0.46
TSC2-206ENST00000439117 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
TSC2-206ENST00000439117 NUDT16Q96DE0 195 aaKnown RBP17.94■□□□□ 0.46
TSC2-206ENST00000439117 IDI1Q13907 227 aa17.94■□□□□ 0.46
TSC2-206ENST00000439117 EXOSC9Q06265 439 aaKnown RBP17.94■□□□□ 0.46
TSC2-206ENST00000439117 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
TSC2-206ENST00000439117 TATP17735 454 aaPredicted RBP17.93■□□□□ 0.46
TSC2-206ENST00000439117 TRIM29Q14134 588 aa17.93■□□□□ 0.46
TSC2-206ENST00000439117 FBXO31Q5XUX0 539 aaPredicted RBP17.93■□□□□ 0.46
TSC2-206ENST00000439117 PPP6R1Q9UPN7 881 aa17.93■□□□□ 0.46
TSC2-206ENST00000439117 GPATCH8Q9UKJ3 1502 aaKnown RBP17.93■□□□□ 0.46
TSC2-206ENST00000439117 PDE3AQ14432 1141 aa17.93■□□□□ 0.46
TSC2-206ENST00000439117 PDE4CQ08493 712 aa17.92■□□□□ 0.46
TSC2-206ENST00000439117 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
TSC2-206ENST00000439117 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
TSC2-206ENST00000439117 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
TSC2-206ENST00000439117 CCDC47Q96A33 483 aaKnown RBP17.92■□□□□ 0.46
TSC2-206ENST00000439117 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
TSC2-206ENST00000439117 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 CPLX1O14810 134 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 TWISTNBQ3B726 338 aaPredicted RBP17.91■□□□□ 0.46
TSC2-206ENST00000439117 WAPLQ7Z5K2 1190 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 DEF6Q9H4E7 631 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 ATP10BO94823 1461 aa17.91■□□□□ 0.46
TSC2-206ENST00000439117 PCMTD1Q96MG8 357 aaPredicted RBP17.91■□□□□ 0.46
TSC2-206ENST00000439117 SYNE3Q6ZMZ3 975 aa17.9■□□□□ 0.46
TSC2-206ENST00000439117 SDF4Q9BRK5 362 aa17.9■□□□□ 0.46
TSC2-206ENST00000439117 PDZRN3Q9UPQ7 1066 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms