RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P6-201ENST00000438508 NUP160Q12769 1436 aa10.77□□□□□ -0.68
HMGN1P6-201ENST00000438508 HPS1Q92902 700 aa10.77□□□□□ -0.69
HMGN1P6-201ENST00000438508 LRRC9Q6ZRR7 1453 aa10.76□□□□□ -0.69
HMGN1P6-201ENST00000438508 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
HMGN1P6-201ENST00000438508 PCF11O94913 1555 aaKnown RBP10.76□□□□□ -0.69
HMGN1P6-201ENST00000438508 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
HMGN1P6-201ENST00000438508 RRBP1Q9P2E9 1410 aaKnown RBP10.75□□□□□ -0.69
HMGN1P6-201ENST00000438508 MORN1Q5T089 497 aa10.75□□□□□ -0.69
HMGN1P6-201ENST00000438508 MRGPRX2Q96LB1 330 aa10.75□□□□□ -0.69
HMGN1P6-201ENST00000438508 GSK3AP49840 483 aa10.74□□□□□ -0.69
HMGN1P6-201ENST00000438508 TTBK1Q5TCY1 1321 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P6-201ENST00000438508 CEP170Q5SW79 1584 aa10.73□□□□□ -0.69
HMGN1P6-201ENST00000438508 REPIN1Q9BWE0 567 aaKnown RBP10.73□□□□□ -0.69
HMGN1P6-201ENST00000438508 DISP1Q96F81 1524 aa10.73□□□□□ -0.69
HMGN1P6-201ENST00000438508 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
HMGN1P6-201ENST00000438508 TRIM32Q13049 653 aa10.72□□□□□ -0.69
HMGN1P6-201ENST00000438508 ERBB4Q15303 1308 aa10.72□□□□□ -0.69
HMGN1P6-201ENST00000438508 LRRIQ1Q96JM4 1722 aa10.71□□□□□ -0.69
HMGN1P6-201ENST00000438508 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
HMGN1P6-201ENST00000438508 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
HMGN1P6-201ENST00000438508 KCTD17Q8N5Z5 321 aa10.7□□□□□ -0.7
HMGN1P6-201ENST00000438508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGN1P6-201ENST00000438508 CCDC18Q5T9S5 1454 aa10.68□□□□□ -0.7
HMGN1P6-201ENST00000438508 CARMIL2Q6F5E8 1435 aa10.67□□□□□ -0.7
HMGN1P6-201ENST00000438508 CCNB3Q8WWL7 1395 aa10.67□□□□□ -0.7
HMGN1P6-201ENST00000438508 BRICD5Q6PL45 260 aa10.67□□□□□ -0.7
HMGN1P6-201ENST00000438508 ATP1B4Q9UN42 357 aaPredicted RBP10.67□□□□□ -0.7
HMGN1P6-201ENST00000438508 HECW1Q76N89 1606 aa10.66□□□□□ -0.7
HMGN1P6-201ENST00000438508 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
HMGN1P6-201ENST00000438508 CHD1O14646 1710 aa10.66□□□□□ -0.7
HMGN1P6-201ENST00000438508 EPRSP07814 1512 aaKnown RBP10.65□□□□□ -0.7
HMGN1P6-201ENST00000438508 FAM161AQ3B820 660 aa10.65□□□□□ -0.7
HMGN1P6-201ENST00000438508 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
HMGN1P6-201ENST00000438508 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
HMGN1P6-201ENST00000438508 PHLDB1Q86UU1 1377 aa10.65□□□□□ -0.71
HMGN1P6-201ENST00000438508 OATP04181 439 aa10.64□□□□□ -0.71
HMGN1P6-201ENST00000438508 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
HMGN1P6-201ENST00000438508 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
HMGN1P6-201ENST00000438508 WDR70Q9NW82 654 aa10.64□□□□□ -0.71
HMGN1P6-201ENST00000438508 MTUS2Q5JR59 1369 aa10.64□□□□□ -0.71
HMGN1P6-201ENST00000438508 RAPGEF6Q8TEU7 1601 aa10.63□□□□□ -0.71
HMGN1P6-201ENST00000438508 VEGFBP49765 207 aa10.63□□□□□ -0.71
HMGN1P6-201ENST00000438508 TRIM46Q7Z4K8 759 aa10.63□□□□□ -0.71
HMGN1P6-201ENST00000438508 ARHGEF11O15085 1522 aa10.63□□□□□ -0.71
HMGN1P6-201ENST00000438508 SHROOM2Q13796 1616 aa10.62□□□□□ -0.71
HMGN1P6-201ENST00000438508 SUPT6HQ7KZ85 1726 aaKnown RBP10.62□□□□□ -0.71
HMGN1P6-201ENST00000438508 FUT2Q10981 343 aa10.62□□□□□ -0.71
HMGN1P6-201ENST00000438508 TMEM151AQ8N4L1 468 aa10.62□□□□□ -0.71
HMGN1P6-201ENST00000438508 EHBP1L1Q8N3D4 1523 aa10.62□□□□□ -0.71
HMGN1P6-201ENST00000438508 MMP16P51512 607 aa10.61□□□□□ -0.71
HMGN1P6-201ENST00000438508 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
HMGN1P6-201ENST00000438508 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
HMGN1P6-201ENST00000438508 MAGI3Q5TCQ9 1506 aa10.59□□□□□ -0.71
HMGN1P6-201ENST00000438508 WNT7BP56706 349 aa10.59□□□□□ -0.71
HMGN1P6-201ENST00000438508 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
HMGN1P6-201ENST00000438508 CDK11AQ9UQ88 783 aaPredicted RBP10.59□□□□□ -0.71
HMGN1P6-201ENST00000438508 NCOA2Q15596 1464 aa10.59□□□□□ -0.71
HMGN1P6-201ENST00000438508 PRG4Q92954 1404 aaPredicted RBP10.58□□□□□ -0.72
HMGN1P6-201ENST00000438508 ABCA8O94911 1581 aa10.58□□□□□ -0.72
HMGN1P6-201ENST00000438508 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
HMGN1P6-201ENST00000438508 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
HMGN1P6-201ENST00000438508 CLSPNQ9HAW4 1339 aa10.58□□□□□ -0.72
HMGN1P6-201ENST00000438508 GDF11O95390 407 aa10.56□□□□□ -0.72
HMGN1P6-201ENST00000438508 FECHP22830 423 aa10.56□□□□□ -0.72
HMGN1P6-201ENST00000438508 PTPRGP23470 1445 aa10.56□□□□□ -0.72
HMGN1P6-201ENST00000438508 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
HMGN1P6-201ENST00000438508 CDK13Q14004 1512 aaKnown RBP10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 BMP1P13497 986 aa10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 MLLT3P42568 568 aaPredicted RBP10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 RASSF7Q02833 373 aa10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 PLB1Q6P1J6 1458 aa10.55□□□□□ -0.72
HMGN1P6-201ENST00000438508 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
HMGN1P6-201ENST00000438508 SKOR1P84550 965 aa10.54□□□□□ -0.72
HMGN1P6-201ENST00000438508 METTL3Q86U44 580 aaKnown RBP10.54□□□□□ -0.72
HMGN1P6-201ENST00000438508 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
HMGN1P6-201ENST00000438508 TCOF1Q13428 1488 aaKnown RBP10.54□□□□□ -0.72
HMGN1P6-201ENST00000438508 TROQ12816 1431 aaPredicted RBP10.53□□□□□ -0.72
HMGN1P6-201ENST00000438508 GCGRP47871 477 aa10.53□□□□□ -0.72
HMGN1P6-201ENST00000438508 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
HMGN1P6-201ENST00000438508 ATP10BO94823 1461 aa10.53□□□□□ -0.72
HMGN1P6-201ENST00000438508 SETD5Q9C0A6 1442 aa10.52□□□□□ -0.73
HMGN1P6-201ENST00000438508 ALDH1A1P00352 501 aa10.52□□□□□ -0.73
HMGN1P6-201ENST00000438508 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
HMGN1P6-201ENST00000438508 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
HMGN1P6-201ENST00000438508 ADCY10Q96PN6 1610 aa10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 PTPN23Q9H3S7 1636 aa10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 FCHSD2O94868 740 aa10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 RDH13Q8NBN7 331 aa10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 DHX57Q6P158 1386 aaKnown RBP10.51□□□□□ -0.73
HMGN1P6-201ENST00000438508 UACAQ9BZF9 1416 aa10.5□□□□□ -0.73
HMGN1P6-201ENST00000438508 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
HMGN1P6-201ENST00000438508 SIAH2O43255 324 aa10.5□□□□□ -0.73
HMGN1P6-201ENST00000438508 DXOO77932 396 aaKnown RBP10.5□□□□□ -0.73
HMGN1P6-201ENST00000438508 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
HMGN1P6-201ENST00000438508 NUTM2FA1L443 756 aa10.48□□□□□ -0.73
HMGN1P6-201ENST00000438508 IGHA1P01876 353 aa10.48□□□□□ -0.73
HMGN1P6-201ENST00000438508 ITGAEP38570 1179 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms