RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
CCND3P1-201ENST00000438347 HAP1P54257 671 aaPredicted RBP18.7■□□□□ 0.58
CCND3P1-201ENST00000438347 ALS2Q96Q42 1657 aa18.69■□□□□ 0.58
CCND3P1-201ENST00000438347 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
CCND3P1-201ENST00000438347 TRPC5Q9UL62 973 aaPredicted RBP18.69■□□□□ 0.58
CCND3P1-201ENST00000438347 SLIT2O94813 1529 aa18.69■□□□□ 0.58
CCND3P1-201ENST00000438347 BRD4O60885 1362 aaPredicted RBP18.68■□□□□ 0.58
CCND3P1-201ENST00000438347 PLEKHG5O94827 1062 aa18.68■□□□□ 0.58
CCND3P1-201ENST00000438347 TESK2Q96S53 571 aa18.68■□□□□ 0.58
CCND3P1-201ENST00000438347 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
CCND3P1-201ENST00000438347 ATRNO75882 1429 aa18.67■□□□□ 0.58
CCND3P1-201ENST00000438347 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 FAM83GA6ND36 823 aa18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 USP6P35125 1406 aa18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
CCND3P1-201ENST00000438347 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
CCND3P1-201ENST00000438347 UPF1Q92900 1129 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCND3P1-201ENST00000438347 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.57
CCND3P1-201ENST00000438347 SLC24A1O60721 1099 aa18.63■□□□□ 0.57
CCND3P1-201ENST00000438347 NUTM2GQ5VZR2 741 aa18.63■□□□□ 0.57
CCND3P1-201ENST00000438347 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
CCND3P1-201ENST00000438347 USP19O94966 1318 aa18.62■□□□□ 0.57
CCND3P1-201ENST00000438347 USP47Q96K76 1375 aa18.62■□□□□ 0.57
CCND3P1-201ENST00000438347 ABCA3Q99758 1704 aa18.62■□□□□ 0.57
CCND3P1-201ENST00000438347 MARF1Q9Y4F3 1742 aaKnown RBP18.62■□□□□ 0.57
CCND3P1-201ENST00000438347 RGS12O14924 1447 aa18.61■□□□□ 0.57
CCND3P1-201ENST00000438347 CCDC125Q86Z20 511 aa18.61■□□□□ 0.57
CCND3P1-201ENST00000438347 GJD4Q96KN9 370 aaPredicted RBP18.61■□□□□ 0.57
CCND3P1-201ENST00000438347 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
CCND3P1-201ENST00000438347 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
CCND3P1-201ENST00000438347 VPS72Q15906 364 aa18.59■□□□□ 0.57
CCND3P1-201ENST00000438347 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.57
CCND3P1-201ENST00000438347 SLC12A5Q9H2X9 1139 aa18.58■□□□□ 0.56
CCND3P1-201ENST00000438347 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.56
CCND3P1-201ENST00000438347 KIAA0232Q92628 1395 aa18.57■□□□□ 0.56
CCND3P1-201ENST00000438347 BTG4Q9NY30 223 aa18.57■□□□□ 0.56
CCND3P1-201ENST00000438347 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
CCND3P1-201ENST00000438347 TTC21AQ8NDW8 1320 aa18.56■□□□□ 0.56
CCND3P1-201ENST00000438347 GCP02774 474 aa18.56■□□□□ 0.56
CCND3P1-201ENST00000438347 NLRP6P59044 892 aa18.56■□□□□ 0.56
CCND3P1-201ENST00000438347 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
CCND3P1-201ENST00000438347 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.56■□□□□ 0.56
CCND3P1-201ENST00000438347 CPDO75976 1380 aa18.55■□□□□ 0.56
CCND3P1-201ENST00000438347 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
CCND3P1-201ENST00000438347 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
CCND3P1-201ENST00000438347 TMF1P82094 1093 aa18.54■□□□□ 0.56
CCND3P1-201ENST00000438347 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
CCND3P1-201ENST00000438347 COL14A1Q05707 1796 aaKnown RBP18.53■□□□□ 0.56
CCND3P1-201ENST00000438347 ONECUT3O60422 494 aaPredicted RBP18.53■□□□□ 0.56
CCND3P1-201ENST00000438347 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
CCND3P1-201ENST00000438347 NWD2Q9ULI1 1742 aa18.53■□□□□ 0.56
CCND3P1-201ENST00000438347 PHRF1Q9P1Y6 1649 aaKnown RBP18.52■□□□□ 0.56
CCND3P1-201ENST00000438347 GLI3P10071 1580 aa18.52■□□□□ 0.56
CCND3P1-201ENST00000438347 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
CCND3P1-201ENST00000438347 TERF2IPQ9NYB0 399 aa18.52■□□□□ 0.56
CCND3P1-201ENST00000438347 PLCH1Q4KWH8 1693 aa18.52■□□□□ 0.56
CCND3P1-201ENST00000438347 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
CCND3P1-201ENST00000438347 SLIT3O75094 1523 aa18.51■□□□□ 0.55
CCND3P1-201ENST00000438347 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
CCND3P1-201ENST00000438347 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
CCND3P1-201ENST00000438347 PIK3C2AO00443 1686 aa18.5■□□□□ 0.55
CCND3P1-201ENST00000438347 SPATA31A5Q5VU36 1347 aa18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 SPATA31A7Q8IWB4 1347 aa18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
CCND3P1-201ENST00000438347 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
CCND3P1-201ENST00000438347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCND3P1-201ENST00000438347 NME9Q86XW9 330 aa18.47■□□□□ 0.55
CCND3P1-201ENST00000438347 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
CCND3P1-201ENST00000438347 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
CCND3P1-201ENST00000438347 ZRANB1Q9UGI0 708 aa18.47■□□□□ 0.55
CCND3P1-201ENST00000438347 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
CCND3P1-201ENST00000438347 ARHGEF25Q86VW2 580 aa18.46■□□□□ 0.55
CCND3P1-201ENST00000438347 CAMTA1Q9Y6Y1 1673 aa18.46■□□□□ 0.55
CCND3P1-201ENST00000438347 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
CCND3P1-201ENST00000438347 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
CCND3P1-201ENST00000438347 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
CCND3P1-201ENST00000438347 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCND3P1-201ENST00000438347 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
CCND3P1-201ENST00000438347 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
CCND3P1-201ENST00000438347 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
CCND3P1-201ENST00000438347 EVA1CP58658 441 aa18.43■□□□□ 0.54
CCND3P1-201ENST00000438347 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
CCND3P1-201ENST00000438347 LARP1Q6PKG0 1096 aaKnown RBP18.42■□□□□ 0.54
CCND3P1-201ENST00000438347 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
CCND3P1-201ENST00000438347 NFAT5O94916 1531 aa18.41■□□□□ 0.54
CCND3P1-201ENST00000438347 AXIN2Q9Y2T1 843 aa18.41■□□□□ 0.54
CCND3P1-201ENST00000438347 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
CCND3P1-201ENST00000438347 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
CCND3P1-201ENST00000438347 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
CCND3P1-201ENST00000438347 SOX12O15370 315 aa18.4■□□□□ 0.54
CCND3P1-201ENST00000438347 BARGINQ6ZT62 677 aa18.39■□□□□ 0.53
CCND3P1-201ENST00000438347 KRT27Q7Z3Y8 459 aa18.39■□□□□ 0.53
CCND3P1-201ENST00000438347 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
CCND3P1-201ENST00000438347 USP54Q70EL1 1684 aa18.38■□□□□ 0.53
CCND3P1-201ENST00000438347 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms