RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
RPE-210ENST00000438204 FAM196AQ6ZSG2 479 aa14.15□□□□□ -0.14
RPE-210ENST00000438204 STK26Q9P289 416 aa14.15□□□□□ -0.14
RPE-210ENST00000438204 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
RPE-210ENST00000438204 VGFO15240 615 aaPredicted RBP14.14□□□□□ -0.15
RPE-210ENST00000438204 PDGFDQ9GZP0 370 aaPredicted RBP14.13□□□□□ -0.15
RPE-210ENST00000438204 PHF8Q9UPP1 1060 aa14.13□□□□□ -0.15
RPE-210ENST00000438204 RGPD3A6NKT7 1758 aaPredicted RBP14.12□□□□□ -0.15
RPE-210ENST00000438204 RGPD4Q7Z3J3 1758 aa14.12□□□□□ -0.15
RPE-210ENST00000438204 PSME1Q06323 249 aa14.12□□□□□ -0.15
RPE-210ENST00000438204 APLP2Q06481 763 aa14.12□□□□□ -0.15
RPE-210ENST00000438204 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
RPE-210ENST00000438204 SPATA31A1Q5TZJ5 1347 aa14.11□□□□□ -0.15
RPE-210ENST00000438204 SBF2Q86WG5 1849 aa14.1□□□□□ -0.15
RPE-210ENST00000438204 PHRF1Q9P1Y6 1649 aaKnown RBP14.09□□□□□ -0.15
RPE-210ENST00000438204 GIGYF1O75420 1035 aaPredicted RBP14.09□□□□□ -0.15
RPE-210ENST00000438204 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
RPE-210ENST00000438204 SHANK3Q9BYB0 1731 aa14.09□□□□□ -0.15
RPE-210ENST00000438204 FHDC1Q9C0D6 1143 aaPredicted RBP14.08□□□□□ -0.16
RPE-210ENST00000438204 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
RPE-210ENST00000438204 PTGER2P43116 358 aa14.07□□□□□ -0.16
RPE-210ENST00000438204 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
RPE-210ENST00000438204 LOC105371045A0A1W2PR82 267 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 TMEM132EQ6IEE7 984 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 PRDM11Q9NQV5 511 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 STRN4Q9NRL3 753 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 PEAK1Q9H792 1746 aa14.06□□□□□ -0.16
RPE-210ENST00000438204 PARP4Q9UKK3 1724 aaKnown RBP14.05□□□□□ -0.16
RPE-210ENST00000438204 SYT17Q9BSW7 474 aa14.05□□□□□ -0.16
RPE-210ENST00000438204 ATF5Q9Y2D1 282 aaPredicted RBP14.05□□□□□ -0.16
RPE-210ENST00000438204 ABCC11Q96J66 1382 aa14.05□□□□□ -0.16
RPE-210ENST00000438204 CHRNA2Q15822 529 aa14.04□□□□□ -0.16
RPE-210ENST00000438204 RPGRIP1LQ68CZ1 1315 aa14.04□□□□□ -0.16
RPE-210ENST00000438204 YTHDC2Q9H6S0 1430 aaKnown RBP14.04□□□□□ -0.16
RPE-210ENST00000438204 ITGAEP38570 1179 aa14.03□□□□□ -0.16
RPE-210ENST00000438204 PDE3BQ13370 1112 aa14.03□□□□□ -0.16
RPE-210ENST00000438204 KIAA0232Q92628 1395 aa14.03□□□□□ -0.16
RPE-210ENST00000438204 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
RPE-210ENST00000438204 LRRC37A3O60309 1634 aa14.01□□□□□ -0.17
RPE-210ENST00000438204 SAFB2Q14151 953 aaKnown RBP eCLIP14□□□□□ -0.17
RPE-210ENST00000438204 GOLGB1Q14789 3259 aaKnown RBP14□□□□□ -0.17
RPE-210ENST00000438204 ANKARQ7Z5J8 1434 aa13.99□□□□□ -0.17
RPE-210ENST00000438204 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
RPE-210ENST00000438204 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
RPE-210ENST00000438204 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
RPE-210ENST00000438204 PTF1AQ7RTS3 328 aa13.98□□□□□ -0.17
RPE-210ENST00000438204 ACIN1Q9UKV3 1341 aaKnown RBP13.97□□□□□ -0.17
RPE-210ENST00000438204 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
RPE-210ENST00000438204 BCL11BQ9C0K0 894 aaPredicted RBP13.97□□□□□ -0.17
RPE-210ENST00000438204 OVOS2A0A0G2JMS6 1433 aa13.97□□□□□ -0.17
RPE-210ENST00000438204 OVOS2A0A0J9YW53 1432 aa13.97□□□□□ -0.17
RPE-210ENST00000438204 OVOS2Q6IE36 1432 aa13.97□□□□□ -0.17
RPE-210ENST00000438204 WNK3Q9BYP7 1800 aa13.97□□□□□ -0.17
RPE-210ENST00000438204 GPRASP1Q5JY77 1395 aa13.96□□□□□ -0.17
RPE-210ENST00000438204 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
RPE-210ENST00000438204 AKAP12Q02952 1782 aa13.96□□□□□ -0.18
RPE-210ENST00000438204 ZC3H6P61129 1189 aaKnown RBP13.95□□□□□ -0.18
RPE-210ENST00000438204 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
RPE-210ENST00000438204 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
RPE-210ENST00000438204 GPR162Q16538 588 aa13.94□□□□□ -0.18
RPE-210ENST00000438204 PROM2Q8N271 834 aa13.94□□□□□ -0.18
RPE-210ENST00000438204 TCP11L2Q8N4U5 519 aa13.94□□□□□ -0.18
RPE-210ENST00000438204 ATP7BP35670 1465 aa13.93□□□□□ -0.18
RPE-210ENST00000438204 PLSCR1O15162 318 aa13.93□□□□□ -0.18
RPE-210ENST00000438204 PRAM1Q96QH2 718 aa13.93□□□□□ -0.18
RPE-210ENST00000438204 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
RPE-210ENST00000438204 TOPAZ1Q8N9V7 1692 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 EVA1CP58658 441 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 RGL3Q3MIN7 710 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
RPE-210ENST00000438204 MTFR1LQ9H019 292 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 MAP3K5Q99683 1374 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 ITSN1Q15811 1721 aa13.92□□□□□ -0.18
RPE-210ENST00000438204 SPATA31E1Q6ZUB1 1445 aa13.91□□□□□ -0.18
RPE-210ENST00000438204 NUTM2GQ5VZR2 741 aa13.91□□□□□ -0.18
RPE-210ENST00000438204 ARXQ96QS3 562 aa13.91□□□□□ -0.18
RPE-210ENST00000438204 HIRIP3Q9BW71 556 aaPredicted RBP13.91□□□□□ -0.18
RPE-210ENST00000438204 STK32BQ9NY57 414 aa13.91□□□□□ -0.18
RPE-210ENST00000438204 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
RPE-210ENST00000438204 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
RPE-210ENST00000438204 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
RPE-210ENST00000438204 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
RPE-210ENST00000438204 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
RPE-210ENST00000438204 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
RPE-210ENST00000438204 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
RPE-210ENST00000438204 COL5A2P05997 1499 aaPredicted RBP13.88□□□□□ -0.19
RPE-210ENST00000438204 HSPA6P17066 643 aa13.88□□□□□ -0.19
RPE-210ENST00000438204 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
RPE-210ENST00000438204 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
RPE-210ENST00000438204 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
RPE-210ENST00000438204 CAPN15O75808 1086 aa13.86□□□□□ -0.19
RPE-210ENST00000438204 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
RPE-210ENST00000438204 TUBGCP6Q96RT7 1819 aa13.85□□□□□ -0.19
RPE-210ENST00000438204 COL24A1Q17RW2 1714 aa13.85□□□□□ -0.19
RPE-210ENST00000438204 POGKQ9P215 609 aa13.85□□□□□ -0.19
RPE-210ENST00000438204 THRAP3Q9Y2W1 955 aaKnown RBP13.85□□□□□ -0.19
RPE-210ENST00000438204 CRB1P82279 1406 aa13.84□□□□□ -0.19
RPE-210ENST00000438204 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms