RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ADGRB2O60241 1585 aa18.92■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 RREB1Q92766 1687 aa18.91■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 PARD3Q8TEW0 1356 aa18.91■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 NBPF8Q3BBV2 869 aa18.9■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 NBPF14Q5TI25 921 aa18.9■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
SMAD9-IT1-201ENST00000437983 RGPD8O14715 1765 aaPredicted RBP18.89■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 ITGAEP38570 1179 aa18.88■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 TECPR2O15040 1411 aa18.87■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 RPGRIP1LQ68CZ1 1315 aa18.87■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 FKBP8Q14318 412 aa18.86■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 ADGRF5Q8IZF2 1346 aa18.85■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 PPLO60437 1756 aa18.85■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 COL14A1Q05707 1796 aaKnown RBP18.85■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
SMAD9-IT1-201ENST00000437983 PMFBP1Q8TBY8 1022 aa18.83■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 ABCC11Q96J66 1382 aa18.82■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 PDGFDQ9GZP0 370 aaPredicted RBP18.81■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 RRBP1Q9P2E9 1410 aaKnown RBP18.8■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 NRKQ7Z2Y5 1582 aa18.8■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 RTN4Q9NQC3 1192 aaKnown RBP18.79■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 IFT172Q9UG01 1749 aa18.79■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 CEP350Q5VT06 3117 aa18.78■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 ANO8Q9HCE9 1232 aaPredicted RBP18.77■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 PRDM11Q9NQV5 511 aa18.77■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
SMAD9-IT1-201ENST00000437983 KNDC1Q76NI1 1749 aa18.77■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 ZBTB7AO95365 584 aa18.76■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 CHRNA2Q15822 529 aa18.76■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 AMER1Q5JTC6 1135 aaPredicted RBP18.76■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 TRPM3Q9HCF6 1732 aaPredicted RBP18.76■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 PTGER2P43116 358 aa18.75■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 MYOM1P52179 1685 aa18.75■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 YTHDC2Q9H6S0 1430 aaKnown RBP18.74■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 SAFB2Q14151 953 aaKnown RBP eCLIP18.74■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 SYT17Q9BSW7 474 aa18.73■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 FHDC1Q9C0D6 1143 aaPredicted RBP18.72■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 CRYBG1Q9Y4K1 1723 aa18.71■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
SMAD9-IT1-201ENST00000437983 SIRT1Q96EB6 747 aa18.7■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 CHD4Q14839 1912 aa18.7■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 BARGINQ6ZT62 677 aa18.69■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 ACIN1Q9UKV3 1341 aaKnown RBP18.69■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 GIGYF1O75420 1035 aaPredicted RBP18.68■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PAK3O75914 559 aaPredicted RBP18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 GPRASP1Q5JY77 1395 aa18.67■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 SAMD1Q6SPF0 538 aaPredicted RBP18.65■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PROM2Q8N271 834 aa18.65■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 PRR36Q9H6K5 1346 aa18.65■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 SSH2Q76I76 1423 aa18.65■□□□□ 0.58
SMAD9-IT1-201ENST00000437983 EVA1CP58658 441 aa18.64■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 BCL11BQ9C0K0 894 aaPredicted RBP18.64■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 PLSCR1O15162 318 aa18.63■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 ANKRD30BQ9BXX2 1392 aa18.62■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 SPATA31E1Q6ZUB1 1445 aa18.61■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 SGIP1Q9BQI5 828 aa18.61■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 C14orf93Q9H972 538 aaKnown RBP18.6■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 RGPD3A6NKT7 1758 aaPredicted RBP18.58■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 RGPD4Q7Z3J3 1758 aa18.58■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 PEAK1Q9H792 1746 aa18.58■□□□□ 0.57
SMAD9-IT1-201ENST00000437983 POGKQ9P215 609 aa18.58■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 PHRF1Q9P1Y6 1649 aaKnown RBP18.58■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 GPR162Q16538 588 aa18.56■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 MTFR1LQ9H019 292 aa18.56■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 PARP4Q9UKK3 1724 aaKnown RBP18.55■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 SLC15A2Q16348 729 aa18.55■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 ARXQ96QS3 562 aa18.55■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 SBF2Q86WG5 1849 aa18.55■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 THRAP3Q9Y2W1 955 aaKnown RBP18.54■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 SHANK3Q9BYB0 1731 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms