RNA–Protein interactions for RNA: ENST00000437974.5

ARHGEF28-204, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARHGEF28, Length 5,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-204ENST00000437974 ERC1Q8IUD2 1116 aa21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 CFTRP13569 1480 aa21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 GPS2Q13227 327 aa21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 PNISRQ8TF01 805 aaKnown RBP21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 ZNF592Q92610 1267 aa21.97■■□□□ 1.11
ARHGEF28-204ENST00000437974 CCDC158Q5M9N0 1113 aa21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 POGZQ7Z3K3 1410 aa21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 NFKBIBQ15653 356 aa21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 TWISTNBQ3B726 338 aaPredicted RBP21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 TTC39AQ5SRH9 613 aa21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 SCAPERQ9BY12 1400 aa21.96■■□□□ 1.11
ARHGEF28-204ENST00000437974 SYNJ1O43426 1573 aa21.95■■□□□ 1.11
ARHGEF28-204ENST00000437974 HIP1O00291 1037 aa21.95■■□□□ 1.11
ARHGEF28-204ENST00000437974 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.1
ARHGEF28-204ENST00000437974 HFM1A2PYH4 1435 aa21.95■■□□□ 1.1
ARHGEF28-204ENST00000437974 HDGFL1Q5TGJ6 251 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 HOMER1Q86YM7 354 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 CABP1Q9NZU7 370 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 ODF2Q5BJF6 829 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 EPS15P42566 896 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 SULT6B1Q6IMI4 303 aa21.94■■□□□ 1.1
ARHGEF28-204ENST00000437974 PRDM11Q9NQV5 511 aa21.93■■□□□ 1.1
ARHGEF28-204ENST00000437974 MRC2Q9UBG0 1479 aa21.93■■□□□ 1.1
ARHGEF28-204ENST00000437974 NAP1L1P55209 391 aaKnown RBP21.93■■□□□ 1.1
ARHGEF28-204ENST00000437974 PIP4K2BP78356 416 aa21.93■■□□□ 1.1
ARHGEF28-204ENST00000437974 EXOSC9Q06265 439 aaKnown RBP21.92■■□□□ 1.1
ARHGEF28-204ENST00000437974 GNAI2P04899 355 aa21.92■■□□□ 1.1
ARHGEF28-204ENST00000437974 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
ARHGEF28-204ENST00000437974 KDM4AO75164 1064 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 NBPF1Q3BBV0 1214 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 RRP12Q5JTH9 1297 aaKnown RBP21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 RTEL1-TNFRSF6BF6WH68 1400 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 TMEM132AQ24JP5 1023 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
ARHGEF28-204ENST00000437974 OFD1O75665 1012 aa21.89■■□□□ 1.1
ARHGEF28-204ENST00000437974 WWC2Q6AWC2 1192 aa21.89■■□□□ 1.1
ARHGEF28-204ENST00000437974 SLC4A2P04920 1241 aa21.89■■□□□ 1.1
ARHGEF28-204ENST00000437974 SLC12A5Q9H2X9 1139 aa21.89■■□□□ 1.1
ARHGEF28-204ENST00000437974 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
ARHGEF28-204ENST00000437974 NBPF8Q3BBV2 869 aa21.88■■□□□ 1.09
ARHGEF28-204ENST00000437974 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
ARHGEF28-204ENST00000437974 RAPGEF3O95398 923 aa21.88■■□□□ 1.09
ARHGEF28-204ENST00000437974 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.88■■□□□ 1.09
ARHGEF28-204ENST00000437974 CDK5RAP3Q96JB5 506 aa21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 SDF4Q9BRK5 362 aa21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 NAT10Q9H0A0 1025 aaKnown RBP21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 MPHOSPH8Q99549 860 aa21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 ATP2B2Q01814 1243 aa21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
ARHGEF28-204ENST00000437974 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 ATP2B1P20020 1258 aa21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 NACAP1Q9BZK3 213 aa21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 MYL6BP14649 208 aa21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 ZFYVE27Q5T4F4 411 aa21.85■■□□□ 1.09
ARHGEF28-204ENST00000437974 RPGRIP1LQ68CZ1 1315 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 SRCIN1Q9C0H9 1055 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 HMGB2P26583 209 aaKnown RBP21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 C1orf115Q9H7X2 142 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 CCDC57Q2TAC2 916 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 BCAR3O75815 825 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 TXLNAP40222 546 aa21.84■■□□□ 1.09
ARHGEF28-204ENST00000437974 RBM5P52756 815 aaKnown RBP eCLIP21.83■■□□□ 1.09
ARHGEF28-204ENST00000437974 GCC1Q96CN9 775 aa21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 NOB1Q9ULX3 412 aaKnown RBP21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 FBXO3Q9UK99 471 aa21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 SETQ01105 290 aaPredicted RBP21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 TSR2Q969E8 191 aaKnown RBP21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 SIL1Q9H173 461 aa21.82■■□□□ 1.08
ARHGEF28-204ENST00000437974 KRT18P05783 430 aaKnown RBP21.81■■□□□ 1.08
ARHGEF28-204ENST00000437974 EFCAB5A4FU69 1503 aa21.81■■□□□ 1.08
ARHGEF28-204ENST00000437974 PDCP20941 246 aa21.8■■□□□ 1.08
ARHGEF28-204ENST00000437974 ZSCAN25Q6NSZ9 544 aa21.8■■□□□ 1.08
ARHGEF28-204ENST00000437974 FAM13BQ9NYF5 915 aa21.8■■□□□ 1.08
ARHGEF28-204ENST00000437974 FAM43AQ8N2R8 423 aa21.8■■□□□ 1.08
ARHGEF28-204ENST00000437974 XPCQ01831 940 aaPredicted RBP21.79■■□□□ 1.08
ARHGEF28-204ENST00000437974 ERBINQ96RT1 1412 aa21.79■■□□□ 1.08
ARHGEF28-204ENST00000437974 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
ARHGEF28-204ENST00000437974 PDILTQ8N807 584 aa21.79■■□□□ 1.08
ARHGEF28-204ENST00000437974 NEK4P51957 841 aa21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 TROQ12816 1431 aaPredicted RBP21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 MCM2P49736 904 aa21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 ATAD2Q6PL18 1390 aa21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 CCDC173Q0VFZ6 552 aa21.78■■□□□ 1.08
ARHGEF28-204ENST00000437974 PDE3AQ14432 1141 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 LRRCC1Q9C099 1032 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 HSP90AB2PQ58FF8 381 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 ZNF396Q96N95 335 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 TIAM1Q13009 1591 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 TRAK2O60296 914 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 CDR1P51861 262 aa21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 ZC3H6P61129 1189 aaKnown RBP21.77■■□□□ 1.08
ARHGEF28-204ENST00000437974 RUFY1Q96T51 708 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms