RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 G3BP1Q13283 466 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCH1-209ENST00000437951 TNMDQ9H2S6 317 aa13.66□□□□□ -0.22
PTCH1-209ENST00000437951 CCAR1Q8IX12 1150 aaKnown RBP13.65□□□□□ -0.22
PTCH1-209ENST00000437951 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 EVA1CP58658 441 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 COG6Q9Y2V7 657 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-209ENST00000437951 IVLP07476 585 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 MYZAPP0CAP1 466 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.22
PTCH1-209ENST00000437951 SKIDA1Q1XH10 827 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 TAX1BP1Q86VP1 789 aa13.65□□□□□ -0.22
PTCH1-209ENST00000437951 STK26Q9P289 416 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 DESP17661 470 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 KIF18AQ8NI77 898 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 PHF23Q9BUL5 403 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-209ENST00000437951 PRPF40AO75400 957 aaKnown RBP13.64□□□□□ -0.23
PTCH1-209ENST00000437951 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
PTCH1-209ENST00000437951 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
PTCH1-209ENST00000437951 NEMFO60524 1076 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 SMC1AQ14683 1233 aaKnown RBP13.64□□□□□ -0.23
PTCH1-209ENST00000437951 SPC24Q8NBT2 197 aa13.64□□□□□ -0.23
PTCH1-209ENST00000437951 GTF2A1P52655 376 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-209ENST00000437951 IRX3P78415 501 aaPredicted RBP13.63□□□□□ -0.23
PTCH1-209ENST00000437951 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 IL27Q8NEV9 243 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 GPATCH11Q8N954 259 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 NUP155O75694 1391 aa13.63□□□□□ -0.23
PTCH1-209ENST00000437951 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
PTCH1-209ENST00000437951 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
PTCH1-209ENST00000437951 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
PTCH1-209ENST00000437951 KRT85P78386 507 aa13.62□□□□□ -0.23
PTCH1-209ENST00000437951 CEP57L1Q8IYX8 460 aa13.62□□□□□ -0.23
PTCH1-209ENST00000437951 SPECC1LQ69YQ0 1117 aa13.61□□□□□ -0.23
PTCH1-209ENST00000437951 AMPHP49418 695 aa13.61□□□□□ -0.23
PTCH1-209ENST00000437951 WWC2Q6AWC2 1192 aa13.61□□□□□ -0.23
PTCH1-209ENST00000437951 ZNF397Q8NF99 534 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-209ENST00000437951 TICAM2Q86XR7 235 aa13.61□□□□□ -0.23
PTCH1-209ENST00000437951 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTCH1-209ENST00000437951 V9GYY5 206 aaPredicted RBP13.61□□□□□ -0.23
PTCH1-209ENST00000437951 TAF4BQ92750 862 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 PLIN1O60240 522 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 EPB41L2O43491 1005 aaKnown RBP13.6□□□□□ -0.23
PTCH1-209ENST00000437951 ERC1Q8IUD2 1116 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 CASQ1P31415 396 aa13.6□□□□□ -0.23
PTCH1-209ENST00000437951 FAM193AP78312 1265 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 STK38Q15208 465 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 SEPT11Q9NVA2 429 aaKnown RBP13.59□□□□□ -0.23
PTCH1-209ENST00000437951 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 LRRFIP2Q9Y608 721 aaKnown RBP13.59□□□□□ -0.23
PTCH1-209ENST00000437951 PRIMPOLQ96LW4 560 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
PTCH1-209ENST00000437951 FOXD1Q16676 465 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 NBPF1Q3BBV0 1214 aa13.59□□□□□ -0.23
PTCH1-209ENST00000437951 CCDC175P0C221 793 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 GCC1Q96CN9 775 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 CCDC18Q5T9S5 1454 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 RAD21O60216 631 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 CETN2P41208 172 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 ARHGAP29Q52LW3 1261 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 KIF5CO60282 957 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 SEPT6Q14141 434 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 NGDNQ8NEJ9 315 aaKnown RBP13.58□□□□□ -0.24
PTCH1-209ENST00000437951 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
PTCH1-209ENST00000437951 GGT6Q6P531 493 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 RUNDC1Q96C34 613 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 SLC3A2P08195 630 aaKnown RBP13.57□□□□□ -0.24
PTCH1-209ENST00000437951 GTPBP4Q9BZE4 634 aaKnown RBP13.57□□□□□ -0.24
PTCH1-209ENST00000437951 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 WASHC2AQ641Q2 1341 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 GNAI1P63096 354 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 DDX12PQ92771 950 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
PTCH1-209ENST00000437951 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
PTCH1-209ENST00000437951 MNAT1P51948 309 aa13.56□□□□□ -0.24
PTCH1-209ENST00000437951 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
PTCH1-209ENST00000437951 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-209ENST00000437951 TUBB4BP68371 445 aa13.56□□□□□ -0.24
PTCH1-209ENST00000437951 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-209ENST00000437951 CBX1P83916 185 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 EVC2Q86UK5 1308 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 CCDC144AA2RUR9 1427 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 USP47Q96K76 1375 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
PTCH1-209ENST00000437951 NUP62CLQ9H1M0 184 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 CDKL5O76039 1030 aa13.55□□□□□ -0.24
PTCH1-209ENST00000437951 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms