RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 EP400Q96L91 3159 aa15.84■□□□□ 0.13
PDLIM2-211ENST00000436754 ARHGEF28Q8N1W1 1705 aaKnown RBP15.83■□□□□ 0.13
PDLIM2-211ENST00000436754 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
PDLIM2-211ENST00000436754 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-211ENST00000436754 L3MBTL2Q969R5 705 aa15.82■□□□□ 0.12
PDLIM2-211ENST00000436754 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-211ENST00000436754 CDK19Q9BWU1 502 aa15.81■□□□□ 0.12
PDLIM2-211ENST00000436754 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
PDLIM2-211ENST00000436754 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
PDLIM2-211ENST00000436754 NRAPQ86VF7 1730 aa15.8■□□□□ 0.12
PDLIM2-211ENST00000436754 ATP7BP35670 1465 aa15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 SPATA31A5Q5VU36 1347 aa15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 SPATA31A7Q8IWB4 1347 aa15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 FAM98CQ17RN3 349 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
PDLIM2-211ENST00000436754 ITSN1Q15811 1721 aa15.78■□□□□ 0.12
PDLIM2-211ENST00000436754 CRYBG1Q9Y4K1 1723 aa15.78■□□□□ 0.12
PDLIM2-211ENST00000436754 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
PDLIM2-211ENST00000436754 NBPF1Q3BBV0 1214 aa15.77■□□□□ 0.12
PDLIM2-211ENST00000436754 PRDM11Q9NQV5 511 aa15.77■□□□□ 0.12
PDLIM2-211ENST00000436754 ACEP12821 1306 aa15.76■□□□□ 0.11
PDLIM2-211ENST00000436754 TRPM1Q7Z4N2 1603 aa15.75■□□□□ 0.11
PDLIM2-211ENST00000436754 BAG6P46379 1132 aa15.74■□□□□ 0.11
PDLIM2-211ENST00000436754 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
PDLIM2-211ENST00000436754 SPATA31A1Q5TZJ5 1347 aa15.73■□□□□ 0.11
PDLIM2-211ENST00000436754 A0A0G2JS52 829 aa15.73■□□□□ 0.11
PDLIM2-211ENST00000436754 MYT1Q01538 1121 aa15.73■□□□□ 0.11
PDLIM2-211ENST00000436754 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
PDLIM2-211ENST00000436754 TOPAZ1Q8N9V7 1692 aa15.72■□□□□ 0.11
PDLIM2-211ENST00000436754 BRD4O60885 1362 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-211ENST00000436754 THSD7AQ9UPZ6 1657 aa15.71■□□□□ 0.11
PDLIM2-211ENST00000436754 ZC3H6P61129 1189 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-211ENST00000436754 ABTB2Q8N961 1025 aa15.71■□□□□ 0.11
PDLIM2-211ENST00000436754 ROCK2O75116 1388 aaKnown RBP15.71■□□□□ 0.11
PDLIM2-211ENST00000436754 QRICH2Q9H0J4 1663 aa15.7■□□□□ 0.1
PDLIM2-211ENST00000436754 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
PDLIM2-211ENST00000436754 CHRNA2Q15822 529 aa15.7■□□□□ 0.1
PDLIM2-211ENST00000436754 BARGINQ6ZT62 677 aa15.7■□□□□ 0.1
PDLIM2-211ENST00000436754 CPDO75976 1380 aa15.7■□□□□ 0.1
PDLIM2-211ENST00000436754 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
PDLIM2-211ENST00000436754 PHRF1Q9P1Y6 1649 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-211ENST00000436754 NUTM2GQ5VZR2 741 aa15.69■□□□□ 0.1
PDLIM2-211ENST00000436754 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
PDLIM2-211ENST00000436754 USP19O94966 1318 aa15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 EVA1CP58658 441 aa15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 SRPK2P78362 688 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 FAM196AQ6ZSG2 479 aa15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 PCGF6Q9BYE7 350 aa15.68■□□□□ 0.1
PDLIM2-211ENST00000436754 GCP02774 474 aa15.67■□□□□ 0.1
PDLIM2-211ENST00000436754 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
PDLIM2-211ENST00000436754 STRN4Q9NRL3 753 aa15.67■□□□□ 0.1
PDLIM2-211ENST00000436754 RGPD1P0DJD0 1748 aa15.67■□□□□ 0.1
PDLIM2-211ENST00000436754 PPIP5K1Q6PFW1 1433 aa15.67■□□□□ 0.1
PDLIM2-211ENST00000436754 EN1Q05925 392 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-211ENST00000436754 THRAP3Q9Y2W1 955 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-211ENST00000436754 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
PDLIM2-211ENST00000436754 CAMTA1Q9Y6Y1 1673 aa15.65■□□□□ 0.1
PDLIM2-211ENST00000436754 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
PDLIM2-211ENST00000436754 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 NRKQ7Z2Y5 1582 aa15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 TCP11L2Q8N4U5 519 aa15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 CAMKK2Q96RR4 588 aa15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 CABP1Q9NZU7 370 aa15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 LRP5O75197 1615 aa15.64■□□□□ 0.09
PDLIM2-211ENST00000436754 LMO7Q8WWI1 1683 aa15.63■□□□□ 0.09
PDLIM2-211ENST00000436754 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
PDLIM2-211ENST00000436754 C11orf95C9JLR9 678 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-211ENST00000436754 USP35Q9P2H5 1018 aa15.62■□□□□ 0.09
PDLIM2-211ENST00000436754 EVC2Q86UK5 1308 aa15.62■□□□□ 0.09
PDLIM2-211ENST00000436754 PARD3Q8TEW0 1356 aa15.62■□□□□ 0.09
PDLIM2-211ENST00000436754 USP6P35125 1406 aa15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 PSDA5PKW4 1024 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 TRIM37O94972 964 aa15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 EZH2Q15910 746 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
PDLIM2-211ENST00000436754 TNS1Q9HBL0 1735 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-211ENST00000436754 NLRP6P59044 892 aa15.6■□□□□ 0.09
PDLIM2-211ENST00000436754 AATKQ6ZMQ8 1374 aa15.6■□□□□ 0.09
PDLIM2-211ENST00000436754 APBA3O96018 575 aa15.59■□□□□ 0.09
PDLIM2-211ENST00000436754 COL5A2P05997 1499 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-211ENST00000436754 CRB1P82279 1406 aa15.58■□□□□ 0.08
PDLIM2-211ENST00000436754 SLIT3O75094 1523 aa15.58■□□□□ 0.08
PDLIM2-211ENST00000436754 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-211ENST00000436754 KCNH5Q8NCM2 988 aa15.55■□□□□ 0.08
PDLIM2-211ENST00000436754 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
PDLIM2-211ENST00000436754 TTC21BQ7Z4L5 1316 aa15.54■□□□□ 0.08
PDLIM2-211ENST00000436754 TTC21AQ8NDW8 1320 aa15.54■□□□□ 0.08
PDLIM2-211ENST00000436754 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
PDLIM2-211ENST00000436754 ARHGEF25Q86VW2 580 aa15.54■□□□□ 0.08
PDLIM2-211ENST00000436754 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
PDLIM2-211ENST00000436754 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
PDLIM2-211ENST00000436754 CDCA7Q9BWT1 371 aaPredicted RBP15.53■□□□□ 0.08
PDLIM2-211ENST00000436754 AXIN2Q9Y2T1 843 aa15.53■□□□□ 0.08
PDLIM2-211ENST00000436754 COL18A1P39060 1754 aa15.53■□□□□ 0.08
PDLIM2-211ENST00000436754 SBNO2Q9Y2G9 1366 aa15.52■□□□□ 0.08
PDLIM2-211ENST00000436754 WDR17Q8IZU2 1322 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms