RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PTGER2P43116 358 aa13.31□□□□□ -0.28
NIF3L1-208ENST00000436412 XIRP1Q702N8 1843 aaKnown RBP13.31□□□□□ -0.28
NIF3L1-208ENST00000436412 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 KCNA6P17658 529 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 FOSBP53539 338 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 TMEM94Q12767 1356 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
NIF3L1-208ENST00000436412 CEP152O94986 1710 aa13.29□□□□□ -0.28
NIF3L1-208ENST00000436412 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
NIF3L1-208ENST00000436412 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
NIF3L1-208ENST00000436412 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
NIF3L1-208ENST00000436412 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
NIF3L1-208ENST00000436412 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
NIF3L1-208ENST00000436412 ADGRD1Q6QNK2 874 aa13.27□□□□□ -0.29
NIF3L1-208ENST00000436412 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.29
NIF3L1-208ENST00000436412 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
NIF3L1-208ENST00000436412 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
NIF3L1-208ENST00000436412 KDM5AP29375 1690 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-208ENST00000436412 KANK1Q14678 1352 aa13.26□□□□□ -0.29
NIF3L1-208ENST00000436412 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
NIF3L1-208ENST00000436412 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
NIF3L1-208ENST00000436412 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
NIF3L1-208ENST00000436412 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
NIF3L1-208ENST00000436412 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
NIF3L1-208ENST00000436412 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
NIF3L1-208ENST00000436412 BCL2L12Q9HB09 334 aa13.24□□□□□ -0.29
NIF3L1-208ENST00000436412 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 JCADQ9P266 1359 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 TK2O00142 265 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 HRO43593 1189 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 IDI1Q13907 227 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 TET3O43151 1660 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
NIF3L1-208ENST00000436412 MSH6P52701 1360 aa13.22□□□□□ -0.29
NIF3L1-208ENST00000436412 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
NIF3L1-208ENST00000436412 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
NIF3L1-208ENST00000436412 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
NIF3L1-208ENST00000436412 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
NIF3L1-208ENST00000436412 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
NIF3L1-208ENST00000436412 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
NIF3L1-208ENST00000436412 LMTK2Q8IWU2 1503 aa13.2□□□□□ -0.3
NIF3L1-208ENST00000436412 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
NIF3L1-208ENST00000436412 DPYSL4O14531 572 aa13.19□□□□□ -0.3
NIF3L1-208ENST00000436412 KANK4Q5T7N3 995 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-208ENST00000436412 ADAM33Q9BZ11 813 aa13.19□□□□□ -0.3
NIF3L1-208ENST00000436412 ABCC5O15440 1437 aa13.19□□□□□ -0.3
NIF3L1-208ENST00000436412 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-208ENST00000436412 PCDHGA10Q9Y5H3 936 aa13.18□□□□□ -0.3
NIF3L1-208ENST00000436412 NOS1P29475 1434 aa13.18□□□□□ -0.3
NIF3L1-208ENST00000436412 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 PHLPP1O60346 1717 aa13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 NCOA3Q9Y6Q9 1424 aa13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 BCANQ96GW7 911 aa13.17□□□□□ -0.3
NIF3L1-208ENST00000436412 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
NIF3L1-208ENST00000436412 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
NIF3L1-208ENST00000436412 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
NIF3L1-208ENST00000436412 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
NIF3L1-208ENST00000436412 CROCC2H7BZ55 1655 aa13.15□□□□□ -0.3
NIF3L1-208ENST00000436412 PLEKHG1Q9ULL1 1385 aa13.15□□□□□ -0.3
NIF3L1-208ENST00000436412 DAPK1P53355 1430 aa13.14□□□□□ -0.31
NIF3L1-208ENST00000436412 SLC4A5Q9BY07 1137 aa13.14□□□□□ -0.31
NIF3L1-208ENST00000436412 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 PTPREP23469 700 aa13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 PTPN23Q9H3S7 1636 aa13.13□□□□□ -0.31
NIF3L1-208ENST00000436412 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
NIF3L1-208ENST00000436412 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
NIF3L1-208ENST00000436412 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
NIF3L1-208ENST00000436412 PPP1R15AO75807 674 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-208ENST00000436412 PHF14O94880 888 aa13.11□□□□□ -0.31
NIF3L1-208ENST00000436412 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
NIF3L1-208ENST00000436412 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
NIF3L1-208ENST00000436412 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
NIF3L1-208ENST00000436412 C14orf37Q86TY3 774 aa13.1□□□□□ -0.31
NIF3L1-208ENST00000436412 CHIC2Q9UKJ5 165 aa13.1□□□□□ -0.31
NIF3L1-208ENST00000436412 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 ATF3P18847 181 aa13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 RXRBP28702 533 aa13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 RIMS2Q9UQ26 1411 aa13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 LRP6O75581 1613 aa13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 AHDC1Q5TGY3 1603 aaPredicted RBP13.09□□□□□ -0.31
NIF3L1-208ENST00000436412 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-208ENST00000436412 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
NIF3L1-208ENST00000436412 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
NIF3L1-208ENST00000436412 CDK12Q9NYV4 1490 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-208ENST00000436412 E2F4Q16254 413 aa13.07□□□□□ -0.32
NIF3L1-208ENST00000436412 SHPRHQ149N8 1683 aa13.07□□□□□ -0.32
NIF3L1-208ENST00000436412 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
NIF3L1-208ENST00000436412 COL9A1P20849 921 aa13.06□□□□□ -0.32
NIF3L1-208ENST00000436412 PDIA6Q15084 440 aa13.06□□□□□ -0.32
NIF3L1-208ENST00000436412 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-208ENST00000436412 FBXW7Q969H0 707 aa13.05□□□□□ -0.32
NIF3L1-208ENST00000436412 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
NIF3L1-208ENST00000436412 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms