RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 RGS12O14924 1447 aa24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 ATP7BP35670 1465 aa24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 RBM6P78332 1123 aaKnown RBP24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 FNBP4Q8N3X1 1017 aaPredicted RBP24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 PHF8Q9UPP1 1060 aa24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
CCDC144A-209ENST00000436374 KRT28Q7Z3Y7 464 aa24.26■■□□□ 1.47
CCDC144A-209ENST00000436374 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
CCDC144A-209ENST00000436374 PLEKHG3A1L390 1219 aa24.25■■□□□ 1.47
CCDC144A-209ENST00000436374 USP21Q9UK80 565 aa24.25■■□□□ 1.47
CCDC144A-209ENST00000436374 DIEXFQ68CQ4 756 aaKnown RBP24.24■■□□□ 1.47
CCDC144A-209ENST00000436374 CABP1Q9NZU7 370 aa24.24■■□□□ 1.47
CCDC144A-209ENST00000436374 PSME1Q06323 249 aa24.23■■□□□ 1.47
CCDC144A-209ENST00000436374 PANK3Q9H999 370 aa24.23■■□□□ 1.47
CCDC144A-209ENST00000436374 ITSN1Q15811 1721 aa24.22■■□□□ 1.47
CCDC144A-209ENST00000436374 BCL9LQ86UU0 1499 aa24.22■■□□□ 1.47
CCDC144A-209ENST00000436374 ATRNO75882 1429 aa24.22■■□□□ 1.47
CCDC144A-209ENST00000436374 SLC12A5Q9H2X9 1139 aa24.22■■□□□ 1.47
CCDC144A-209ENST00000436374 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
CCDC144A-209ENST00000436374 BRD4O60885 1362 aaPredicted RBP24.21■■□□□ 1.47
CCDC144A-209ENST00000436374 PRR36Q9H6K5 1346 aa24.2■■□□□ 1.46
CCDC144A-209ENST00000436374 PMFBP1Q8TBY8 1022 aa24.2■■□□□ 1.46
CCDC144A-209ENST00000436374 TNS3Q68CZ2 1445 aa24.19■■□□□ 1.46
CCDC144A-209ENST00000436374 MYOM1P52179 1685 aa24.19■■□□□ 1.46
CCDC144A-209ENST00000436374 TRPC5Q9UL62 973 aaPredicted RBP24.19■■□□□ 1.46
CCDC144A-209ENST00000436374 ABCA3Q99758 1704 aa24.18■■□□□ 1.46
CCDC144A-209ENST00000436374 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
CCDC144A-209ENST00000436374 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
CCDC144A-209ENST00000436374 TRPM3Q9HCF6 1732 aaPredicted RBP24.17■■□□□ 1.46
CCDC144A-209ENST00000436374 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
CCDC144A-209ENST00000436374 POLR3AO14802 1390 aaPredicted RBP24.16■■□□□ 1.46
CCDC144A-209ENST00000436374 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
CCDC144A-209ENST00000436374 CPSF1Q10570 1443 aaKnown RBP24.16■■□□□ 1.46
CCDC144A-209ENST00000436374 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
CCDC144A-209ENST00000436374 LMOD2Q6P5Q4 547 aa24.15■■□□□ 1.46
CCDC144A-209ENST00000436374 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.15■■□□□ 1.46
CCDC144A-209ENST00000436374 A0A1W2PP64 1363 aa24.15■■□□□ 1.46
CCDC144A-209ENST00000436374 NPC1L1Q9UHC9 1359 aa24.15■■□□□ 1.46
CCDC144A-209ENST00000436374 SLIT2O94813 1529 aa24.15■■□□□ 1.46
CCDC144A-209ENST00000436374 CGNL1Q0VF96 1302 aa24.14■■□□□ 1.46
CCDC144A-209ENST00000436374 HAP1P54257 671 aaPredicted RBP24.14■■□□□ 1.45
CCDC144A-209ENST00000436374 NSD2O96028 1365 aa24.14■■□□□ 1.45
CCDC144A-209ENST00000436374 ACEP12821 1306 aa24.13■■□□□ 1.45
CCDC144A-209ENST00000436374 EDC4Q6P2E9 1401 aaKnown RBP24.13■■□□□ 1.45
CCDC144A-209ENST00000436374 PER1O15534 1290 aaPredicted RBP24.13■■□□□ 1.45
CCDC144A-209ENST00000436374 ANP32CO43423 234 aa24.13■■□□□ 1.45
CCDC144A-209ENST00000436374 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
CCDC144A-209ENST00000436374 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
CCDC144A-209ENST00000436374 CD163L1Q9NR16 1453 aa24.11■■□□□ 1.45
CCDC144A-209ENST00000436374 NSD3Q9BZ95 1437 aa24.1■■□□□ 1.45
CCDC144A-209ENST00000436374 TTC21AQ8NDW8 1320 aa24.09■■□□□ 1.45
CCDC144A-209ENST00000436374 PLCH1Q4KWH8 1693 aa24.08■■□□□ 1.45
CCDC144A-209ENST00000436374 GLI3P10071 1580 aa24.08■■□□□ 1.45
CCDC144A-209ENST00000436374 ARHGEF10O15013 1369 aa24.08■■□□□ 1.45
CCDC144A-209ENST00000436374 UNC5CLQ8IV45 518 aa24.08■■□□□ 1.45
CCDC144A-209ENST00000436374 GJD4Q96KN9 370 aaPredicted RBP24.08■■□□□ 1.45
CCDC144A-209ENST00000436374 USP6P35125 1406 aa24.08■■□□□ 1.44
CCDC144A-209ENST00000436374 RALBP1Q15311 655 aa24.07■■□□□ 1.44
CCDC144A-209ENST00000436374 CARD14Q9BXL6 1004 aa24.07■■□□□ 1.44
CCDC144A-209ENST00000436374 NWD2Q9ULI1 1742 aa24.05■■□□□ 1.44
CCDC144A-209ENST00000436374 CRYBG1Q9Y4K1 1723 aa24.04■■□□□ 1.44
CCDC144A-209ENST00000436374 PAK3O75914 559 aaPredicted RBP24.04■■□□□ 1.44
CCDC144A-209ENST00000436374 AMER1Q5JTC6 1135 aaPredicted RBP24.04■■□□□ 1.44
CCDC144A-209ENST00000436374 AKAP12Q02952 1782 aa24.02■■□□□ 1.44
CCDC144A-209ENST00000436374 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
CCDC144A-209ENST00000436374 BRWD3Q6RI45 1802 aa24.02■■□□□ 1.44
CCDC144A-209ENST00000436374 TTC21BQ7Z4L5 1316 aa24.01■■□□□ 1.43
CCDC144A-209ENST00000436374 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
CCDC144A-209ENST00000436374 NRAPQ86VF7 1730 aa24■■□□□ 1.43
CCDC144A-209ENST00000436374 SSH2Q76I76 1423 aa24■■□□□ 1.43
CCDC144A-209ENST00000436374 PRKRIP1Q9H875 184 aaPredicted RBP23.99■■□□□ 1.43
CCDC144A-209ENST00000436374 EP400Q96L91 3159 aa23.98■■□□□ 1.43
CCDC144A-209ENST00000436374 VPS72Q15906 364 aa23.97■■□□□ 1.43
CCDC144A-209ENST00000436374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
CCDC144A-209ENST00000436374 FYB1O15117 783 aa23.96■■□□□ 1.43
CCDC144A-209ENST00000436374 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
CCDC144A-209ENST00000436374 COG3Q96JB2 828 aa23.96■■□□□ 1.43
CCDC144A-209ENST00000436374 PARD3Q8TEW0 1356 aa23.95■■□□□ 1.42
CCDC144A-209ENST00000436374 CC2D1BQ5T0F9 858 aaKnown RBP23.95■■□□□ 1.42
CCDC144A-209ENST00000436374 COL14A1Q05707 1796 aaKnown RBP23.95■■□□□ 1.42
CCDC144A-209ENST00000436374 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.42
CCDC144A-209ENST00000436374 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
CCDC144A-209ENST00000436374 PHRF1Q9P1Y6 1649 aaKnown RBP23.92■■□□□ 1.42
CCDC144A-209ENST00000436374 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
CCDC144A-209ENST00000436374 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
CCDC144A-209ENST00000436374 NLRP13Q86W25 1043 aa23.91■■□□□ 1.42
CCDC144A-209ENST00000436374 BTG4Q9NY30 223 aa23.91■■□□□ 1.42
CCDC144A-209ENST00000436374 CCER2I3L3R5 266 aa23.9■■□□□ 1.42
CCDC144A-209ENST00000436374 ONECUT3O60422 494 aaPredicted RBP23.9■■□□□ 1.42
CCDC144A-209ENST00000436374 SEPT12Q8IYM1 358 aa23.9■■□□□ 1.42
CCDC144A-209ENST00000436374 CCDC9Q9Y3X0 531 aaKnown RBP23.9■■□□□ 1.42
CCDC144A-209ENST00000436374 NUTM2GQ5VZR2 741 aa23.89■■□□□ 1.41
CCDC144A-209ENST00000436374 GGNBP2Q9H3C7 697 aa23.89■■□□□ 1.41
CCDC144A-209ENST00000436374 NLRP6P59044 892 aa23.88■■□□□ 1.41
CCDC144A-209ENST00000436374 NME9Q86XW9 330 aa23.88■■□□□ 1.41
CCDC144A-209ENST00000436374 KIF20BQ96Q89 1820 aa23.87■■□□□ 1.41
CCDC144A-209ENST00000436374 OVOS2A0A0J9YW53 1432 aa23.86■■□□□ 1.41
CCDC144A-209ENST00000436374 OVOS2Q6IE36 1432 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms