RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 MTHFSP49914 203 aa16.19■□□□□ 0.18
PRAMEF27-201ENST00000436041 C19orf44Q9H6X5 657 aa16.19■□□□□ 0.18
PRAMEF27-201ENST00000436041 NKTRP30414 1462 aaKnown RBP16.19■□□□□ 0.18
PRAMEF27-201ENST00000436041 DEKP35659 375 aaKnown RBP16.18■□□□□ 0.18
PRAMEF27-201ENST00000436041 WDR43Q15061 677 aaKnown RBP eCLIP16.18■□□□□ 0.18
PRAMEF27-201ENST00000436041 NCOA3Q9Y6Q9 1424 aa16.18■□□□□ 0.18
PRAMEF27-201ENST00000436041 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
PRAMEF27-201ENST00000436041 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
PRAMEF27-201ENST00000436041 CFAP53Q96M91 514 aa16.17■□□□□ 0.18
PRAMEF27-201ENST00000436041 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
PRAMEF27-201ENST00000436041 NME9Q86XW9 330 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 COG3Q96JB2 828 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 USP6P35125 1406 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 ZBED9Q6R2W3 1325 aa16.16■□□□□ 0.18
PRAMEF27-201ENST00000436041 FMN2Q9NZ56 1722 aa16.15■□□□□ 0.18
PRAMEF27-201ENST00000436041 AKAP12Q02952 1782 aa16.15■□□□□ 0.18
PRAMEF27-201ENST00000436041 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
PRAMEF27-201ENST00000436041 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
PRAMEF27-201ENST00000436041 NALCNQ8IZF0 1738 aa16.15■□□□□ 0.18
PRAMEF27-201ENST00000436041 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 MON2Q7Z3U7 1717 aa16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 NOP58Q9Y2X3 529 aaKnown RBP16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 TMEM94Q12767 1356 aa16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
PRAMEF27-201ENST00000436041 ATF3P18847 181 aa16.12■□□□□ 0.17
PRAMEF27-201ENST00000436041 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
PRAMEF27-201ENST00000436041 ANKRD26Q9UPS8 1709 aa16.12■□□□□ 0.17
PRAMEF27-201ENST00000436041 KIF20BQ96Q89 1820 aa16.11■□□□□ 0.17
PRAMEF27-201ENST00000436041 RGPD8O14715 1765 aaPredicted RBP16.11■□□□□ 0.17
PRAMEF27-201ENST00000436041 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
PRAMEF27-201ENST00000436041 POLKQ9UBT6 870 aa16.1■□□□□ 0.17
PRAMEF27-201ENST00000436041 PSME1Q06323 249 aa16.1■□□□□ 0.17
PRAMEF27-201ENST00000436041 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
PRAMEF27-201ENST00000436041 NUDCQ9Y266 331 aa16.09■□□□□ 0.17
PRAMEF27-201ENST00000436041 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
PRAMEF27-201ENST00000436041 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
PRAMEF27-201ENST00000436041 ORAI2Q96SN7 254 aa16.08■□□□□ 0.17
PRAMEF27-201ENST00000436041 DCCP43146 1447 aa16.08■□□□□ 0.16
PRAMEF27-201ENST00000436041 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
PRAMEF27-201ENST00000436041 RNF123Q5XPI4 1314 aa16.08■□□□□ 0.16
PRAMEF27-201ENST00000436041 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
PRAMEF27-201ENST00000436041 ZNF335Q9H4Z2 1342 aaPredicted RBP16.07■□□□□ 0.16
PRAMEF27-201ENST00000436041 FBLN1P23142 703 aa16.07■□□□□ 0.16
PRAMEF27-201ENST00000436041 NRKQ7Z2Y5 1582 aa16.07■□□□□ 0.16
PRAMEF27-201ENST00000436041 MSH6P52701 1360 aa16.06■□□□□ 0.16
PRAMEF27-201ENST00000436041 C1orf167Q5SNV9 1468 aa16.06■□□□□ 0.16
PRAMEF27-201ENST00000436041 PPM1GO15355 546 aaPredicted RBP16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 DIAPH1O60610 1272 aaKnown RBP16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 OVOS2A0A0J9YW53 1432 aa16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 OVOS2Q6IE36 1432 aa16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 FOXO3O43524 673 aa16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 NLRP6P59044 892 aa16.05■□□□□ 0.16
PRAMEF27-201ENST00000436041 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 PDE3BQ13370 1112 aa16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 SALL2Q9Y467 1007 aaPredicted RBP16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
PRAMEF27-201ENST00000436041 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
PRAMEF27-201ENST00000436041 CCDC146Q8IYE0 955 aa16.02■□□□□ 0.16
PRAMEF27-201ENST00000436041 RUNDC1Q96C34 613 aa16.02■□□□□ 0.16
PRAMEF27-201ENST00000436041 MST1RQ04912 1400 aa16.02■□□□□ 0.16
PRAMEF27-201ENST00000436041 KRT28Q7Z3Y7 464 aa16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 IPO9Q96P70 1041 aaKnown RBP16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 COL3A1P02461 1466 aaPredicted RBP16.01■□□□□ 0.15
PRAMEF27-201ENST00000436041 APAF1O14727 1248 aa16■□□□□ 0.15
PRAMEF27-201ENST00000436041 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
PRAMEF27-201ENST00000436041 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
PRAMEF27-201ENST00000436041 IL13P35225 146 aa15.99■□□□□ 0.15
PRAMEF27-201ENST00000436041 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
PRAMEF27-201ENST00000436041 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
PRAMEF27-201ENST00000436041 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
PRAMEF27-201ENST00000436041 FCHSD2O94868 740 aa15.97■□□□□ 0.15
PRAMEF27-201ENST00000436041 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
PRAMEF27-201ENST00000436041 SLAIN2Q9P270 581 aa15.97■□□□□ 0.15
PRAMEF27-201ENST00000436041 SOX12O15370 315 aa15.97■□□□□ 0.15
PRAMEF27-201ENST00000436041 PIK3C2AO00443 1686 aa15.96■□□□□ 0.15
PRAMEF27-201ENST00000436041 KIF1AQ12756 1690 aa15.96■□□□□ 0.15
PRAMEF27-201ENST00000436041 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
PRAMEF27-201ENST00000436041 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.15
PRAMEF27-201ENST00000436041 MAP3K19Q56UN5 1328 aa15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 XIRP1Q702N8 1843 aaKnown RBP15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 AMPHP49418 695 aa15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 RTL5Q5HYW3 569 aaPredicted RBP15.95■□□□□ 0.14
PRAMEF27-201ENST00000436041 KIF24Q5T7B8 1368 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms