RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 BRWD3Q6RI45 1802 aa16.08■□□□□ 0.16
SPTLC1P4-201ENST00000435997 COL14A1Q05707 1796 aaKnown RBP16.07■□□□□ 0.16
SPTLC1P4-201ENST00000435997 POLR3AO14802 1390 aaPredicted RBP16.05■□□□□ 0.16
SPTLC1P4-201ENST00000435997 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
SPTLC1P4-201ENST00000435997 BTG4Q9NY30 223 aa16.04■□□□□ 0.16
SPTLC1P4-201ENST00000435997 TOPAZ1Q8N9V7 1692 aa16.04■□□□□ 0.16
SPTLC1P4-201ENST00000435997 THSD7AQ9UPZ6 1657 aa16.04■□□□□ 0.16
SPTLC1P4-201ENST00000435997 ITSN1Q15811 1721 aa16.03■□□□□ 0.16
SPTLC1P4-201ENST00000435997 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
SPTLC1P4-201ENST00000435997 DEFB132Q7Z7B7 95 aa16.03■□□□□ 0.16
SPTLC1P4-201ENST00000435997 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 SPATA31A5Q5VU36 1347 aa16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 SPATA31A7Q8IWB4 1347 aa16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 NGDNQ8NEJ9 315 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 NUDT16Q96DE0 195 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
SPTLC1P4-201ENST00000435997 FAM98CQ17RN3 349 aaKnown RBP16.01■□□□□ 0.15
SPTLC1P4-201ENST00000435997 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
SPTLC1P4-201ENST00000435997 DISP2A7MBM2 1401 aa16■□□□□ 0.15
SPTLC1P4-201ENST00000435997 KIAA0232Q92628 1395 aa16■□□□□ 0.15
SPTLC1P4-201ENST00000435997 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
SPTLC1P4-201ENST00000435997 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
SPTLC1P4-201ENST00000435997 NRKQ7Z2Y5 1582 aa15.98■□□□□ 0.15
SPTLC1P4-201ENST00000435997 CDK19Q9BWU1 502 aa15.98■□□□□ 0.15
SPTLC1P4-201ENST00000435997 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
SPTLC1P4-201ENST00000435997 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
SPTLC1P4-201ENST00000435997 USP19O94966 1318 aa15.96■□□□□ 0.15
SPTLC1P4-201ENST00000435997 SPATA31A1Q5TZJ5 1347 aa15.96■□□□□ 0.15
SPTLC1P4-201ENST00000435997 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.15
SPTLC1P4-201ENST00000435997 LRP5O75197 1615 aa15.96■□□□□ 0.15
SPTLC1P4-201ENST00000435997 ACEP12821 1306 aa15.95■□□□□ 0.14
SPTLC1P4-201ENST00000435997 NBPF1Q3BBV0 1214 aa15.95■□□□□ 0.14
SPTLC1P4-201ENST00000435997 CPDO75976 1380 aa15.95■□□□□ 0.14
SPTLC1P4-201ENST00000435997 A0A0G2JS52 829 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 BAG6P46379 1132 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 MYT1Q01538 1121 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 LMO7Q8WWI1 1683 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
SPTLC1P4-201ENST00000435997 RGPD1P0DJD0 1748 aa15.92■□□□□ 0.14
SPTLC1P4-201ENST00000435997 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
SPTLC1P4-201ENST00000435997 CHRNA2Q15822 529 aa15.92■□□□□ 0.14
SPTLC1P4-201ENST00000435997 PPIP5K1Q6PFW1 1433 aa15.92■□□□□ 0.14
SPTLC1P4-201ENST00000435997 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
SPTLC1P4-201ENST00000435997 BRD4O60885 1362 aaPredicted RBP15.91■□□□□ 0.14
SPTLC1P4-201ENST00000435997 CENPJQ9HC77 1338 aaPredicted RBP15.91■□□□□ 0.14
SPTLC1P4-201ENST00000435997 ZC3H6P61129 1189 aaKnown RBP15.9■□□□□ 0.14
SPTLC1P4-201ENST00000435997 FAM182BQ5T319 152 aa15.9■□□□□ 0.14
SPTLC1P4-201ENST00000435997 NUTM2GQ5VZR2 741 aa15.9■□□□□ 0.14
SPTLC1P4-201ENST00000435997 BARGINQ6ZT62 677 aa15.9■□□□□ 0.14
SPTLC1P4-201ENST00000435997 USP6P35125 1406 aa15.88■□□□□ 0.13
SPTLC1P4-201ENST00000435997 EN1Q05925 392 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1P4-201ENST00000435997 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
SPTLC1P4-201ENST00000435997 COL5A2P05997 1499 aaPredicted RBP15.88■□□□□ 0.13
SPTLC1P4-201ENST00000435997 SLIT3O75094 1523 aa15.88■□□□□ 0.13
SPTLC1P4-201ENST00000435997 QRICH2Q9H0J4 1663 aa15.87■□□□□ 0.13
SPTLC1P4-201ENST00000435997 STRN4Q9NRL3 753 aa15.87■□□□□ 0.13
SPTLC1P4-201ENST00000435997 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
SPTLC1P4-201ENST00000435997 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
SPTLC1P4-201ENST00000435997 FAM196AQ6ZSG2 479 aa15.86■□□□□ 0.13
SPTLC1P4-201ENST00000435997 CABP2Q9NPB3 220 aa15.86■□□□□ 0.13
SPTLC1P4-201ENST00000435997 PARD3Q8TEW0 1356 aa15.86■□□□□ 0.13
SPTLC1P4-201ENST00000435997 GCP02774 474 aa15.85■□□□□ 0.13
SPTLC1P4-201ENST00000435997 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
SPTLC1P4-201ENST00000435997 CAMKK2Q96RR4 588 aa15.85■□□□□ 0.13
SPTLC1P4-201ENST00000435997 PSDA5PKW4 1024 aaPredicted RBP15.84■□□□□ 0.13
SPTLC1P4-201ENST00000435997 NLRP13Q86W25 1043 aa15.84■□□□□ 0.13
SPTLC1P4-201ENST00000435997 L3MBTL2Q969R5 705 aa15.84■□□□□ 0.13
SPTLC1P4-201ENST00000435997 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.13
SPTLC1P4-201ENST00000435997 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.12
SPTLC1P4-201ENST00000435997 TRIM37O94972 964 aa15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 EZH2Q15910 746 aaKnown RBP15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 USP35Q9P2H5 1018 aa15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 AATKQ6ZMQ8 1374 aa15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 CRB1P82279 1406 aa15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 PIK3C2AO00443 1686 aa15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
SPTLC1P4-201ENST00000435997 EVA1CP58658 441 aa15.81■□□□□ 0.12
SPTLC1P4-201ENST00000435997 RREB1Q92766 1687 aa15.81■□□□□ 0.12
SPTLC1P4-201ENST00000435997 CABP1Q9NZU7 370 aa15.81■□□□□ 0.12
SPTLC1P4-201ENST00000435997 EVC2Q86UK5 1308 aa15.79■□□□□ 0.12
SPTLC1P4-201ENST00000435997 R3HDM1Q15032 1099 aaKnown RBP15.79■□□□□ 0.12
SPTLC1P4-201ENST00000435997 PEAK1Q9H792 1746 aa15.79■□□□□ 0.12
SPTLC1P4-201ENST00000435997 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
SPTLC1P4-201ENST00000435997 CPSF1Q10570 1443 aaKnown RBP15.78■□□□□ 0.12
SPTLC1P4-201ENST00000435997 ROCK2O75116 1388 aaKnown RBP15.78■□□□□ 0.12
SPTLC1P4-201ENST00000435997 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
SPTLC1P4-201ENST00000435997 COL18A1P39060 1754 aa15.77■□□□□ 0.12
SPTLC1P4-201ENST00000435997 SBNO2Q9Y2G9 1366 aa15.77■□□□□ 0.12
SPTLC1P4-201ENST00000435997 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.11
SPTLC1P4-201ENST00000435997 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
SPTLC1P4-201ENST00000435997 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
SPTLC1P4-201ENST00000435997 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
SPTLC1P4-201ENST00000435997 APBA3O96018 575 aa15.76■□□□□ 0.11
SPTLC1P4-201ENST00000435997 NLRP6P59044 892 aa15.76■□□□□ 0.11
SPTLC1P4-201ENST00000435997 SIN3AQ96ST3 1273 aa15.76■□□□□ 0.11
SPTLC1P4-201ENST00000435997 BCL9O00512 1426 aa15.76■□□□□ 0.11
SPTLC1P4-201ENST00000435997 NFAT5O94916 1531 aa15.75■□□□□ 0.11
SPTLC1P4-201ENST00000435997 ABCC6O95255 1503 aa15.75■□□□□ 0.11
SPTLC1P4-201ENST00000435997 C11orf95C9JLR9 678 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms