RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 FAM198AQ9UFP1 575 aa11.13□□□□□ -0.63
CLNS1AP1-201ENST00000435954 TNRQ92752 1358 aa11.13□□□□□ -0.63
CLNS1AP1-201ENST00000435954 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 SAMD9LQ8IVG5 1584 aa11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 IQGAP1P46940 1657 aa11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 GGT6Q6P531 493 aa11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 A2MP01023 1474 aa11.12□□□□□ -0.63
CLNS1AP1-201ENST00000435954 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 PBX2P40425 430 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 FAM161AQ3B820 660 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 DMRTA1Q5VZB9 504 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 NLRP1Q9C000 1473 aa11.11□□□□□ -0.63
CLNS1AP1-201ENST00000435954 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
CLNS1AP1-201ENST00000435954 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
CLNS1AP1-201ENST00000435954 PROX2Q3B8N5 592 aa11.1□□□□□ -0.63
CLNS1AP1-201ENST00000435954 ADGRG1Q9Y653 693 aa11.1□□□□□ -0.63
CLNS1AP1-201ENST00000435954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLNS1AP1-201ENST00000435954 UGGT1Q9NYU2 1555 aa11.09□□□□□ -0.63
CLNS1AP1-201ENST00000435954 PDE4DQ08499 809 aa11.09□□□□□ -0.63
CLNS1AP1-201ENST00000435954 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PZPP20742 1482 aa11.07□□□□□ -0.64
CLNS1AP1-201ENST00000435954 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
CLNS1AP1-201ENST00000435954 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
CLNS1AP1-201ENST00000435954 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PLEKHH2Q8IVE3 1493 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 KDM5DQ9BY66 1539 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 OATP04181 439 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 AMHR2Q16671 573 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 ZNF772Q68DY9 489 aaPredicted RBP11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 METTL3Q86U44 580 aaKnown RBP11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PHOX2BQ99453 314 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 EEA1Q15075 1411 aa11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 INO80Q9ULG1 1556 aaPredicted RBP11.06□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PACS2Q86VP3 889 aa11.05□□□□□ -0.64
CLNS1AP1-201ENST00000435954 STRCP1A6NGW2 1772 aa11.05□□□□□ -0.64
CLNS1AP1-201ENST00000435954 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
CLNS1AP1-201ENST00000435954 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
CLNS1AP1-201ENST00000435954 JCADQ9P266 1359 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 KIAA1107Q9UPP5 1409 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 RBM46Q8TBY0 533 aaKnown RBP11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 TATDN2Q93075 761 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 EYA1Q99502 592 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 CDC42BPAQ5VT25 1732 aa11.03□□□□□ -0.64
CLNS1AP1-201ENST00000435954 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
CLNS1AP1-201ENST00000435954 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
CLNS1AP1-201ENST00000435954 ZNF777Q9ULD5 760 aaPredicted RBP11.02□□□□□ -0.65
CLNS1AP1-201ENST00000435954 SRCAPQ6ZRS2 3230 aa11.02□□□□□ -0.65
CLNS1AP1-201ENST00000435954 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
CLNS1AP1-201ENST00000435954 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
CLNS1AP1-201ENST00000435954 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
CLNS1AP1-201ENST00000435954 TRIM52Q96A61 297 aa11.01□□□□□ -0.65
CLNS1AP1-201ENST00000435954 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
CLNS1AP1-201ENST00000435954 SMAPO00193 183 aa11□□□□□ -0.65
CLNS1AP1-201ENST00000435954 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
CLNS1AP1-201ENST00000435954 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
CLNS1AP1-201ENST00000435954 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
CLNS1AP1-201ENST00000435954 TK2O00142 265 aa10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 RXRBP28702 533 aa10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 TTLL12Q14166 644 aaPredicted RBP10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 KDM4CQ9H3R0 1056 aa10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 SPATA31A6Q5VVP1 1343 aa10.99□□□□□ -0.65
CLNS1AP1-201ENST00000435954 ZC3H13Q5T200 1668 aaKnown RBP10.98□□□□□ -0.65
CLNS1AP1-201ENST00000435954 MDM2Q00987 491 aaPredicted RBP10.98□□□□□ -0.65
CLNS1AP1-201ENST00000435954 WASHC2CQ9Y4E1 1318 aa10.98□□□□□ -0.65
CLNS1AP1-201ENST00000435954 SCAF11Q99590 1463 aaKnown RBP10.98□□□□□ -0.65
CLNS1AP1-201ENST00000435954 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
CLNS1AP1-201ENST00000435954 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLNS1AP1-201ENST00000435954 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
CLNS1AP1-201ENST00000435954 PHLPP1O60346 1717 aa10.97□□□□□ -0.65
CLNS1AP1-201ENST00000435954 XIRP1Q702N8 1843 aaKnown RBP10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 DHX29Q7Z478 1369 aaKnown RBP10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 CLCN1P35523 988 aa10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 GIGYF2Q6Y7W6 1299 aaKnown RBP10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
CLNS1AP1-201ENST00000435954 ADGRD1Q6QNK2 874 aa10.95□□□□□ -0.66
CLNS1AP1-201ENST00000435954 SEPT9Q9UHD8 586 aaPredicted RBP10.95□□□□□ -0.66
CLNS1AP1-201ENST00000435954 TMEM94Q12767 1356 aa10.94□□□□□ -0.66
CLNS1AP1-201ENST00000435954 POTEMA6NI47 508 aa10.94□□□□□ -0.66
CLNS1AP1-201ENST00000435954 KIF3BO15066 747 aa10.94□□□□□ -0.66
CLNS1AP1-201ENST00000435954 DNAJB2P25686 324 aa10.94□□□□□ -0.66
CLNS1AP1-201ENST00000435954 KRTAP3-3Q9BYR6 98 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms