RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 USP6P35125 1406 aa29.47■■■□□ 2.31
GTF3A-203ENST00000435781 MON2Q7Z3U7 1717 aa29.47■■■□□ 2.31
GTF3A-203ENST00000435781 AFF2P51816 1311 aa29.46■■■□□ 2.31
GTF3A-203ENST00000435781 PLEKHG5O94827 1062 aa29.46■■■□□ 2.31
GTF3A-203ENST00000435781 PUS7Q96PZ0 661 aaKnown RBP29.46■■■□□ 2.31
GTF3A-203ENST00000435781 BRD4O60885 1362 aaPredicted RBP29.45■■■□□ 2.31
GTF3A-203ENST00000435781 POTEAQ6S8J7 498 aa29.45■■■□□ 2.31
GTF3A-203ENST00000435781 PHRF1Q9P1Y6 1649 aaKnown RBP29.45■■■□□ 2.3
GTF3A-203ENST00000435781 NRKQ7Z2Y5 1582 aa29.44■■■□□ 2.3
GTF3A-203ENST00000435781 CPSF1Q10570 1443 aaKnown RBP29.44■■■□□ 2.3
GTF3A-203ENST00000435781 HAP1P54257 671 aaPredicted RBP29.43■■■□□ 2.3
GTF3A-203ENST00000435781 ZNF772Q68DY9 489 aaPredicted RBP29.43■■■□□ 2.3
GTF3A-203ENST00000435781 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
GTF3A-203ENST00000435781 SSH2Q76I76 1423 aa29.41■■■□□ 2.3
GTF3A-203ENST00000435781 CD163L1Q9NR16 1453 aa29.41■■■□□ 2.3
GTF3A-203ENST00000435781 TMF1P82094 1093 aa29.4■■■□□ 2.3
GTF3A-203ENST00000435781 PIK3C2AO00443 1686 aa29.4■■■□□ 2.3
GTF3A-203ENST00000435781 TMC1Q8TDI8 760 aa29.39■■■□□ 2.3
GTF3A-203ENST00000435781 ZNF692Q9BU19 519 aaPredicted RBP29.39■■■□□ 2.3
GTF3A-203ENST00000435781 PLCH1Q4KWH8 1693 aa29.39■■■□□ 2.3
GTF3A-203ENST00000435781 NUTM2GQ5VZR2 741 aa29.38■■■□□ 2.29
GTF3A-203ENST00000435781 ABTB2Q8N961 1025 aa29.38■■■□□ 2.29
GTF3A-203ENST00000435781 FNBP4Q8N3X1 1017 aaPredicted RBP29.37■■■□□ 2.29
GTF3A-203ENST00000435781 SLC12A5Q9H2X9 1139 aa29.37■■■□□ 2.29
GTF3A-203ENST00000435781 KTN1Q86UP2 1357 aaKnown RBP29.37■■■□□ 2.29
GTF3A-203ENST00000435781 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.37■■■□□ 2.29
GTF3A-203ENST00000435781 EIF4G2P78344 907 aaKnown RBP eCLIP29.36■■■□□ 2.29
GTF3A-203ENST00000435781 NWD2Q9ULI1 1742 aa29.35■■■□□ 2.29
GTF3A-203ENST00000435781 NINLQ9Y2I6 1382 aa29.35■■■□□ 2.29
GTF3A-203ENST00000435781 HSPA5P11021 654 aaKnown RBP29.33■■■□□ 2.29
GTF3A-203ENST00000435781 TTC21BQ7Z4L5 1316 aa29.33■■■□□ 2.29
GTF3A-203ENST00000435781 SLIT2O94813 1529 aa29.33■■■□□ 2.29
GTF3A-203ENST00000435781 COL14A1Q05707 1796 aaKnown RBP29.33■■■□□ 2.29
GTF3A-203ENST00000435781 MYOM1P52179 1685 aa29.32■■■□□ 2.28
GTF3A-203ENST00000435781 USP19O94966 1318 aa29.32■■■□□ 2.28
GTF3A-203ENST00000435781 USP21Q9UK80 565 aa29.32■■■□□ 2.28
GTF3A-203ENST00000435781 BCL9LQ86UU0 1499 aa29.31■■■□□ 2.28
GTF3A-203ENST00000435781 A0A1W2PP64 1363 aa29.31■■■□□ 2.28
GTF3A-203ENST00000435781 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
GTF3A-203ENST00000435781 HDGFL2Q7Z4V5 671 aaPredicted RBP29.31■■■□□ 2.28
GTF3A-203ENST00000435781 NLRP13Q86W25 1043 aa29.3■■■□□ 2.28
GTF3A-203ENST00000435781 TERF2IPQ9NYB0 399 aa29.3■■■□□ 2.28
GTF3A-203ENST00000435781 TTC21AQ8NDW8 1320 aa29.29■■■□□ 2.28
GTF3A-203ENST00000435781 QTRT2Q9H974 415 aaKnown RBP29.28■■■□□ 2.28
GTF3A-203ENST00000435781 SLIT3O75094 1523 aa29.28■■■□□ 2.28
GTF3A-203ENST00000435781 NRAPQ86VF7 1730 aa29.28■■■□□ 2.28
GTF3A-203ENST00000435781 FAM83GA6ND36 823 aa29.27■■■□□ 2.28
GTF3A-203ENST00000435781 USP54Q70EL1 1684 aa29.27■■■□□ 2.28
GTF3A-203ENST00000435781 ATRNO75882 1429 aa29.27■■■□□ 2.28
GTF3A-203ENST00000435781 EDC4Q6P2E9 1401 aaKnown RBP29.27■■■□□ 2.28
GTF3A-203ENST00000435781 NLRP6P59044 892 aa29.26■■■□□ 2.27
GTF3A-203ENST00000435781 RXRBP28702 533 aa29.24■■■□□ 2.27
GTF3A-203ENST00000435781 TRPC5Q9UL62 973 aaPredicted RBP29.24■■■□□ 2.27
GTF3A-203ENST00000435781 ANKRD36BQ8N2N9 1353 aa29.24■■■□□ 2.27
GTF3A-203ENST00000435781 KIAA0232Q92628 1395 aa29.24■■■□□ 2.27
GTF3A-203ENST00000435781 UNC5CLQ8IV45 518 aa29.23■■■□□ 2.27
GTF3A-203ENST00000435781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.23■■■□□ 2.27
GTF3A-203ENST00000435781 ZC3H6P61129 1189 aaKnown RBP29.22■■■□□ 2.27
GTF3A-203ENST00000435781 PRDM11Q9NQV5 511 aa29.22■■■□□ 2.27
GTF3A-203ENST00000435781 GCP02774 474 aa29.21■■■□□ 2.27
GTF3A-203ENST00000435781 RBM6P78332 1123 aaKnown RBP29.2■■■□□ 2.26
GTF3A-203ENST00000435781 CDK12Q9NYV4 1490 aaPredicted RBP29.19■■■□□ 2.26
GTF3A-203ENST00000435781 CPDO75976 1380 aa29.19■■■□□ 2.26
GTF3A-203ENST00000435781 USP31Q70CQ4 1352 aa29.18■■■□□ 2.26
GTF3A-203ENST00000435781 NME9Q86XW9 330 aa29.18■■■□□ 2.26
GTF3A-203ENST00000435781 LMO7Q8WWI1 1683 aa29.18■■■□□ 2.26
GTF3A-203ENST00000435781 CHRNA2Q15822 529 aa29.17■■■□□ 2.26
GTF3A-203ENST00000435781 BTG4Q9NY30 223 aa29.17■■■□□ 2.26
GTF3A-203ENST00000435781 ZRANB1Q9UGI0 708 aa29.16■■■□□ 2.26
GTF3A-203ENST00000435781 GLI3P10071 1580 aa29.16■■■□□ 2.26
GTF3A-203ENST00000435781 SOCS7O14512 581 aa29.15■■■□□ 2.26
GTF3A-203ENST00000435781 KIF20BQ96Q89 1820 aa29.15■■■□□ 2.26
GTF3A-203ENST00000435781 NFAT5O94916 1531 aa29.15■■■□□ 2.26
GTF3A-203ENST00000435781 RGS12O14924 1447 aa29.13■■■□□ 2.25
GTF3A-203ENST00000435781 POLR3GLQ9BT43 218 aa29.13■■■□□ 2.25
GTF3A-203ENST00000435781 COL18A1P39060 1754 aa29.13■■■□□ 2.25
GTF3A-203ENST00000435781 VPS72Q15906 364 aa29.12■■■□□ 2.25
GTF3A-203ENST00000435781 GJD4Q96KN9 370 aaPredicted RBP29.12■■■□□ 2.25
GTF3A-203ENST00000435781 CAMTA1Q9Y6Y1 1673 aa29.12■■■□□ 2.25
GTF3A-203ENST00000435781 OVOS2A0A0J9YW53 1432 aa29.11■■■□□ 2.25
GTF3A-203ENST00000435781 OVOS2Q6IE36 1432 aa29.11■■■□□ 2.25
GTF3A-203ENST00000435781 KCNH5Q8NCM2 988 aa29.11■■■□□ 2.25
GTF3A-203ENST00000435781 LTN1O94822 1766 aa29.11■■■□□ 2.25
GTF3A-203ENST00000435781 RGPD5Q99666 1765 aa29.11■■■□□ 2.25
GTF3A-203ENST00000435781 C11orf95C9JLR9 678 aaPredicted RBP29.1■■■□□ 2.25
GTF3A-203ENST00000435781 SOX12O15370 315 aa29.09■■■□□ 2.25
GTF3A-203ENST00000435781 AATKQ6ZMQ8 1374 aa29.06■■■□□ 2.24
GTF3A-203ENST00000435781 ZBTB7CA1YPR0 619 aa29.06■■■□□ 2.24
GTF3A-203ENST00000435781 CCDC9Q9Y3X0 531 aaKnown RBP29.06■■■□□ 2.24
GTF3A-203ENST00000435781 ARHGEF25Q86VW2 580 aa29.05■■■□□ 2.24
GTF3A-203ENST00000435781 CARD14Q9BXL6 1004 aa29.05■■■□□ 2.24
GTF3A-203ENST00000435781 NSD3Q9BZ95 1437 aa29.04■■■□□ 2.24
GTF3A-203ENST00000435781 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
GTF3A-203ENST00000435781 COL5A2P05997 1499 aaPredicted RBP29.03■■■□□ 2.24
GTF3A-203ENST00000435781 STRN4Q9NRL3 753 aa29.02■■■□□ 2.24
GTF3A-203ENST00000435781 ABCC6O95255 1503 aa29.02■■■□□ 2.24
GTF3A-203ENST00000435781 FYB1O15117 783 aa29.01■■■□□ 2.23
GTF3A-203ENST00000435781 COG3Q96JB2 828 aa29.01■■■□□ 2.23
GTF3A-203ENST00000435781 KIF7Q2M1P5 1343 aa29■■■□□ 2.23
GTF3A-203ENST00000435781 SPATA31A5Q5VU36 1347 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms