RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 COL14A1Q05707 1796 aaKnown RBP20.79■□□□□ 0.92
LINC01006-204ENST00000435354 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
LINC01006-204ENST00000435354 PAK3O75914 559 aaPredicted RBP20.78■□□□□ 0.92
LINC01006-204ENST00000435354 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
LINC01006-204ENST00000435354 SIN3AQ96ST3 1273 aa20.76■□□□□ 0.91
LINC01006-204ENST00000435354 CCDC61Q9Y6R9 512 aa20.76■□□□□ 0.91
LINC01006-204ENST00000435354 ACEP12821 1306 aa20.76■□□□□ 0.91
LINC01006-204ENST00000435354 QRICH2Q9H0J4 1663 aa20.75■□□□□ 0.91
LINC01006-204ENST00000435354 ONECUT3O60422 494 aaPredicted RBP20.75■□□□□ 0.91
LINC01006-204ENST00000435354 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
LINC01006-204ENST00000435354 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
LINC01006-204ENST00000435354 CENPJQ9HC77 1338 aaPredicted RBP20.75■□□□□ 0.91
LINC01006-204ENST00000435354 PHRF1Q9P1Y6 1649 aaKnown RBP20.75■□□□□ 0.91
LINC01006-204ENST00000435354 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
LINC01006-204ENST00000435354 TRPM1Q7Z4N2 1603 aa20.74■□□□□ 0.91
LINC01006-204ENST00000435354 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
LINC01006-204ENST00000435354 CCDC125Q86Z20 511 aa20.72■□□□□ 0.91
LINC01006-204ENST00000435354 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
LINC01006-204ENST00000435354 NUTM2GQ5VZR2 741 aa20.7■□□□□ 0.9
LINC01006-204ENST00000435354 PRDM11Q9NQV5 511 aa20.7■□□□□ 0.9
LINC01006-204ENST00000435354 KIAA0232Q92628 1395 aa20.7■□□□□ 0.9
LINC01006-204ENST00000435354 NEUROD1Q13562 356 aa20.69■□□□□ 0.9
LINC01006-204ENST00000435354 CABP2Q9NPB3 220 aa20.69■□□□□ 0.9
LINC01006-204ENST00000435354 BLMP54132 1417 aaPredicted RBP20.69■□□□□ 0.9
LINC01006-204ENST00000435354 PPIP5K1Q6PFW1 1433 aa20.69■□□□□ 0.9
LINC01006-204ENST00000435354 SPATA31A5Q5VU36 1347 aa20.68■□□□□ 0.9
LINC01006-204ENST00000435354 SPATA31A7Q8IWB4 1347 aa20.68■□□□□ 0.9
LINC01006-204ENST00000435354 FAM98CQ17RN3 349 aaKnown RBP20.67■□□□□ 0.9
LINC01006-204ENST00000435354 NRKQ7Z2Y5 1582 aa20.67■□□□□ 0.9
LINC01006-204ENST00000435354 CHRNA2Q15822 529 aa20.66■□□□□ 0.9
LINC01006-204ENST00000435354 KRT27Q7Z3Y8 459 aa20.66■□□□□ 0.9
LINC01006-204ENST00000435354 THSD7AQ9UPZ6 1657 aa20.65■□□□□ 0.9
LINC01006-204ENST00000435354 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
LINC01006-204ENST00000435354 USP19O94966 1318 aa20.64■□□□□ 0.89
LINC01006-204ENST00000435354 ABTB2Q8N961 1025 aa20.64■□□□□ 0.89
LINC01006-204ENST00000435354 ROCK2O75116 1388 aaKnown RBP20.63■□□□□ 0.89
LINC01006-204ENST00000435354 A0A0G2JS52 829 aa20.63■□□□□ 0.89
LINC01006-204ENST00000435354 MYT1Q01538 1121 aa20.63■□□□□ 0.89
LINC01006-204ENST00000435354 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
LINC01006-204ENST00000435354 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
LINC01006-204ENST00000435354 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
LINC01006-204ENST00000435354 USP6P35125 1406 aa20.61■□□□□ 0.89
LINC01006-204ENST00000435354 LMO7Q8WWI1 1683 aa20.61■□□□□ 0.89
LINC01006-204ENST00000435354 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
LINC01006-204ENST00000435354 CPDO75976 1380 aa20.6■□□□□ 0.89
LINC01006-204ENST00000435354 SPATA31A1Q5TZJ5 1347 aa20.6■□□□□ 0.89
LINC01006-204ENST00000435354 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
LINC01006-204ENST00000435354 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
LINC01006-204ENST00000435354 STRN4Q9NRL3 753 aa20.59■□□□□ 0.89
LINC01006-204ENST00000435354 NLRP13Q86W25 1043 aa20.58■□□□□ 0.89
LINC01006-204ENST00000435354 SSH2Q76I76 1423 aa20.58■□□□□ 0.88
LINC01006-204ENST00000435354 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
LINC01006-204ENST00000435354 GCP02774 474 aa20.57■□□□□ 0.88
LINC01006-204ENST00000435354 FAM182BQ5T319 152 aa20.57■□□□□ 0.88
LINC01006-204ENST00000435354 SF3B2Q13435 895 aaKnown RBP20.56■□□□□ 0.88
LINC01006-204ENST00000435354 PIK3C2AO00443 1686 aa20.56■□□□□ 0.88
LINC01006-204ENST00000435354 SLIT3O75094 1523 aa20.55■□□□□ 0.88
LINC01006-204ENST00000435354 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
LINC01006-204ENST00000435354 RGPD1P0DJD0 1748 aa20.53■□□□□ 0.88
LINC01006-204ENST00000435354 EVA1CP58658 441 aa20.53■□□□□ 0.88
LINC01006-204ENST00000435354 LARP1Q6PKG0 1096 aaKnown RBP20.53■□□□□ 0.88
LINC01006-204ENST00000435354 NLRP6P59044 892 aa20.52■□□□□ 0.88
LINC01006-204ENST00000435354 USP35Q9P2H5 1018 aa20.52■□□□□ 0.88
LINC01006-204ENST00000435354 TNS1Q9HBL0 1735 aaKnown RBP20.52■□□□□ 0.88
LINC01006-204ENST00000435354 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
LINC01006-204ENST00000435354 SBNO2Q9Y2G9 1366 aa20.5■□□□□ 0.87
LINC01006-204ENST00000435354 BARGINQ6ZT62 677 aa20.5■□□□□ 0.87
LINC01006-204ENST00000435354 CPSF1Q10570 1443 aaKnown RBP20.5■□□□□ 0.87
LINC01006-204ENST00000435354 TTC21BQ7Z4L5 1316 aa20.49■□□□□ 0.87
LINC01006-204ENST00000435354 COL18A1P39060 1754 aa20.49■□□□□ 0.87
LINC01006-204ENST00000435354 BAG6P46379 1132 aa20.48■□□□□ 0.87
LINC01006-204ENST00000435354 TCP11L2Q8N4U5 519 aa20.48■□□□□ 0.87
LINC01006-204ENST00000435354 ZNF692Q9BU19 519 aaPredicted RBP20.48■□□□□ 0.87
LINC01006-204ENST00000435354 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
LINC01006-204ENST00000435354 AATKQ6ZMQ8 1374 aa20.47■□□□□ 0.87
LINC01006-204ENST00000435354 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
LINC01006-204ENST00000435354 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
LINC01006-204ENST00000435354 DISP2A7MBM2 1401 aa20.46■□□□□ 0.87
LINC01006-204ENST00000435354 ZBTB7CA1YPR0 619 aa20.46■□□□□ 0.87
LINC01006-204ENST00000435354 EN1Q05925 392 aaPredicted RBP20.45■□□□□ 0.86
LINC01006-204ENST00000435354 CRB1P82279 1406 aa20.44■□□□□ 0.86
LINC01006-204ENST00000435354 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
LINC01006-204ENST00000435354 FAM196AQ6ZSG2 479 aa20.44■□□□□ 0.86
LINC01006-204ENST00000435354 TTC21AQ8NDW8 1320 aa20.44■□□□□ 0.86
LINC01006-204ENST00000435354 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
LINC01006-204ENST00000435354 CD163L1Q9NR16 1453 aa20.43■□□□□ 0.86
LINC01006-204ENST00000435354 THRAP3Q9Y2W1 955 aaKnown RBP20.43■□□□□ 0.86
LINC01006-204ENST00000435354 NFAT5O94916 1531 aa20.43■□□□□ 0.86
LINC01006-204ENST00000435354 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
LINC01006-204ENST00000435354 TRIM37O94972 964 aa20.42■□□□□ 0.86
LINC01006-204ENST00000435354 AXIN2Q9Y2T1 843 aa20.42■□□□□ 0.86
LINC01006-204ENST00000435354 TRIM26Q12899 539 aaPredicted RBP20.41■□□□□ 0.86
LINC01006-204ENST00000435354 PDE3BQ13370 1112 aa20.41■□□□□ 0.86
LINC01006-204ENST00000435354 ARHGEF25Q86VW2 580 aa20.41■□□□□ 0.86
LINC01006-204ENST00000435354 USP54Q70EL1 1684 aa20.39■□□□□ 0.86
LINC01006-204ENST00000435354 LRRC37A3O60309 1634 aa20.39■□□□□ 0.86
LINC01006-204ENST00000435354 SOX12O15370 315 aa20.39■□□□□ 0.85
LINC01006-204ENST00000435354 KCNH5Q8NCM2 988 aa20.39■□□□□ 0.85
LINC01006-204ENST00000435354 WNK3Q9BYP7 1800 aa20.39■□□□□ 0.85
LINC01006-204ENST00000435354 PSDA5PKW4 1024 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms