RNA–Protein interactions for RNA: ENST00000434655.5

UBE2F-211, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-211ENST00000434655 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
UBE2F-211ENST00000434655 PPIP5K1Q6PFW1 1433 aa13.11□□□□□ -0.31
UBE2F-211ENST00000434655 NWD2Q9ULI1 1742 aa13.1□□□□□ -0.31
UBE2F-211ENST00000434655 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
UBE2F-211ENST00000434655 SRPK2P78362 688 aaKnown RBP13.1□□□□□ -0.31
UBE2F-211ENST00000434655 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
UBE2F-211ENST00000434655 ACEP12821 1306 aa13.1□□□□□ -0.31
UBE2F-211ENST00000434655 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
UBE2F-211ENST00000434655 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
UBE2F-211ENST00000434655 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
UBE2F-211ENST00000434655 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
UBE2F-211ENST00000434655 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.32
UBE2F-211ENST00000434655 EVC2Q86UK5 1308 aa13.08□□□□□ -0.32
UBE2F-211ENST00000434655 BRD4O60885 1362 aaPredicted RBP13.07□□□□□ -0.32
UBE2F-211ENST00000434655 COL14A1Q05707 1796 aaKnown RBP13.07□□□□□ -0.32
UBE2F-211ENST00000434655 GLI3P10071 1580 aa13.07□□□□□ -0.32
UBE2F-211ENST00000434655 NRAPQ86VF7 1730 aa13.06□□□□□ -0.32
UBE2F-211ENST00000434655 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
UBE2F-211ENST00000434655 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
UBE2F-211ENST00000434655 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
UBE2F-211ENST00000434655 NRKQ7Z2Y5 1582 aa13.05□□□□□ -0.32
UBE2F-211ENST00000434655 USP6P35125 1406 aa13.05□□□□□ -0.32
UBE2F-211ENST00000434655 FAM83GA6ND36 823 aa13.04□□□□□ -0.32
UBE2F-211ENST00000434655 VPS72Q15906 364 aa13.04□□□□□ -0.32
UBE2F-211ENST00000434655 ATAD2Q6PL18 1390 aa13.04□□□□□ -0.32
UBE2F-211ENST00000434655 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
UBE2F-211ENST00000434655 USP19O94966 1318 aa13.03□□□□□ -0.32
UBE2F-211ENST00000434655 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
UBE2F-211ENST00000434655 SSH2Q76I76 1423 aa13.03□□□□□ -0.32
UBE2F-211ENST00000434655 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
UBE2F-211ENST00000434655 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
UBE2F-211ENST00000434655 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
UBE2F-211ENST00000434655 BTG4Q9NY30 223 aa13.01□□□□□ -0.33
UBE2F-211ENST00000434655 AKAP12Q02952 1782 aa13□□□□□ -0.33
UBE2F-211ENST00000434655 PIK3C2AO00443 1686 aa13□□□□□ -0.33
UBE2F-211ENST00000434655 CPSF1Q10570 1443 aaKnown RBP13□□□□□ -0.33
UBE2F-211ENST00000434655 CPDO75976 1380 aa13□□□□□ -0.33
UBE2F-211ENST00000434655 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
UBE2F-211ENST00000434655 SLIT3O75094 1523 aa12.99□□□□□ -0.33
UBE2F-211ENST00000434655 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
UBE2F-211ENST00000434655 NLRP13Q86W25 1043 aa12.98□□□□□ -0.33
UBE2F-211ENST00000434655 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
UBE2F-211ENST00000434655 TIMELESSQ9UNS1 1208 aa12.98□□□□□ -0.33
UBE2F-211ENST00000434655 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
UBE2F-211ENST00000434655 LMO7Q8WWI1 1683 aa12.98□□□□□ -0.33
UBE2F-211ENST00000434655 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
UBE2F-211ENST00000434655 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
UBE2F-211ENST00000434655 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
UBE2F-211ENST00000434655 SPATA31A5Q5VU36 1347 aa12.96□□□□□ -0.33
UBE2F-211ENST00000434655 SPATA31A7Q8IWB4 1347 aa12.96□□□□□ -0.33
UBE2F-211ENST00000434655 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
UBE2F-211ENST00000434655 ZC3H6P61129 1189 aaKnown RBP12.96□□□□□ -0.33
UBE2F-211ENST00000434655 SEPT12Q8IYM1 358 aa12.96□□□□□ -0.33
UBE2F-211ENST00000434655 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
UBE2F-211ENST00000434655 TESK2Q96S53 571 aa12.96□□□□□ -0.33
UBE2F-211ENST00000434655 KTN1Q86UP2 1357 aaKnown RBP12.95□□□□□ -0.34
UBE2F-211ENST00000434655 TTC21BQ7Z4L5 1316 aa12.95□□□□□ -0.34
UBE2F-211ENST00000434655 GCP02774 474 aa12.95□□□□□ -0.34
UBE2F-211ENST00000434655 CHRNA2Q15822 529 aa12.95□□□□□ -0.34
UBE2F-211ENST00000434655 THSD7AQ9UPZ6 1657 aa12.95□□□□□ -0.34
UBE2F-211ENST00000434655 BRWD3Q6RI45 1802 aa12.95□□□□□ -0.34
UBE2F-211ENST00000434655 USP47Q96K76 1375 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 NLRP6P59044 892 aa12.94□□□□□ -0.34
UBE2F-211ENST00000434655 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
UBE2F-211ENST00000434655 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
UBE2F-211ENST00000434655 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
UBE2F-211ENST00000434655 COL5A2P05997 1499 aaPredicted RBP12.92□□□□□ -0.34
UBE2F-211ENST00000434655 EDC4Q6P2E9 1401 aaKnown RBP12.92□□□□□ -0.34
UBE2F-211ENST00000434655 NFAT5O94916 1531 aa12.92□□□□□ -0.34
UBE2F-211ENST00000434655 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
UBE2F-211ENST00000434655 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
UBE2F-211ENST00000434655 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
UBE2F-211ENST00000434655 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
UBE2F-211ENST00000434655 TMC1Q8TDI8 760 aa12.91□□□□□ -0.34
UBE2F-211ENST00000434655 STRN4Q9NRL3 753 aa12.91□□□□□ -0.34
UBE2F-211ENST00000434655 USP31Q70CQ4 1352 aa12.91□□□□□ -0.34
UBE2F-211ENST00000434655 BLMP54132 1417 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-211ENST00000434655 ABCC6O95255 1503 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 A0A0G2JS52 829 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 MYT1Q01538 1121 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
UBE2F-211ENST00000434655 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
UBE2F-211ENST00000434655 COL18A1P39060 1754 aa12.89□□□□□ -0.35
UBE2F-211ENST00000434655 EVA1CP58658 441 aa12.89□□□□□ -0.35
UBE2F-211ENST00000434655 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
UBE2F-211ENST00000434655 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
UBE2F-211ENST00000434655 ARHGEF25Q86VW2 580 aa12.88□□□□□ -0.35
UBE2F-211ENST00000434655 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
UBE2F-211ENST00000434655 CRB1P82279 1406 aa12.88□□□□□ -0.35
UBE2F-211ENST00000434655 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
UBE2F-211ENST00000434655 TMF1P82094 1093 aa12.87□□□□□ -0.35
UBE2F-211ENST00000434655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBE2F-211ENST00000434655 CCER1Q8TC90 406 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-211ENST00000434655 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms