RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 METP08581 1390 aa19.86■□□□□ 0.77
SCARF1-203ENST00000434376 ZKSCAN2Q63HK3 967 aa19.85■□□□□ 0.77
SCARF1-203ENST00000434376 DZIP1LQ8IYY4 767 aaKnown RBP19.85■□□□□ 0.77
SCARF1-203ENST00000434376 TSPYL6Q8N831 410 aa19.85■□□□□ 0.77
SCARF1-203ENST00000434376 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
SCARF1-203ENST00000434376 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
SCARF1-203ENST00000434376 TRMT2AQ8IZ69 625 aaKnown RBP19.85■□□□□ 0.77
SCARF1-203ENST00000434376 PDZRN3Q9UPQ7 1066 aa19.85■□□□□ 0.77
SCARF1-203ENST00000434376 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-203ENST00000434376 NFKBIBQ15653 356 aa19.84■□□□□ 0.77
SCARF1-203ENST00000434376 NGDNQ8NEJ9 315 aaKnown RBP19.84■□□□□ 0.77
SCARF1-203ENST00000434376 KDM2BQ8NHM5 1336 aa19.83■□□□□ 0.77
SCARF1-203ENST00000434376 TRIM27P14373 513 aa19.83■□□□□ 0.76
SCARF1-203ENST00000434376 LTKP29376 864 aa19.83■□□□□ 0.76
SCARF1-203ENST00000434376 GSE1Q14687 1217 aa19.82■□□□□ 0.76
SCARF1-203ENST00000434376 SULT6B1Q6IMI4 303 aa19.82■□□□□ 0.76
SCARF1-203ENST00000434376 TMEM57Q8N5G2 664 aa19.82■□□□□ 0.76
SCARF1-203ENST00000434376 NPC1L1Q9UHC9 1359 aa19.82■□□□□ 0.76
SCARF1-203ENST00000434376 NEO1Q92859 1461 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 MCM10Q7L590 875 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 DDRGK1Q96HY6 314 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 LNPKQ9C0E8 428 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 MS4A1P11836 297 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 C8orf34Q49A92 452 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 ZMYM3Q14202 1370 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
SCARF1-203ENST00000434376 MFAP1P55081 439 aaKnown RBP19.81■□□□□ 0.76
SCARF1-203ENST00000434376 LAMC1P11047 1609 aa19.8■□□□□ 0.76
SCARF1-203ENST00000434376 MYOM1P52179 1685 aa19.8■□□□□ 0.76
SCARF1-203ENST00000434376 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
SCARF1-203ENST00000434376 ATAD2Q6PL18 1390 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 XPCQ01831 940 aaPredicted RBP19.79■□□□□ 0.76
SCARF1-203ENST00000434376 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 ADGRB1O14514 1584 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 GLI2P10070 1586 aa19.79■□□□□ 0.76
SCARF1-203ENST00000434376 PDE3AQ14432 1141 aa19.78■□□□□ 0.76
SCARF1-203ENST00000434376 INSRP06213 1382 aa19.78■□□□□ 0.76
SCARF1-203ENST00000434376 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
SCARF1-203ENST00000434376 QRICH2Q9H0J4 1663 aa19.77■□□□□ 0.76
SCARF1-203ENST00000434376 FOXO3O43524 673 aa19.76■□□□□ 0.75
SCARF1-203ENST00000434376 MVPQ14764 893 aaKnown RBP19.75■□□□□ 0.75
SCARF1-203ENST00000434376 PLEKHF1Q96S99 279 aa19.75■□□□□ 0.75
SCARF1-203ENST00000434376 FRAT2O75474 233 aaPredicted RBP19.74■□□□□ 0.75
SCARF1-203ENST00000434376 RWDD1Q9H446 243 aaPredicted RBP19.74■□□□□ 0.75
SCARF1-203ENST00000434376 SLC4A10Q6U841 1118 aa19.74■□□□□ 0.75
SCARF1-203ENST00000434376 PPIP5K1Q6PFW1 1433 aa19.74■□□□□ 0.75
SCARF1-203ENST00000434376 NEXMIFQ5QGS0 1516 aa19.74■□□□□ 0.75
SCARF1-203ENST00000434376 CAMSAP1Q5T5Y3 1602 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 ATF7IPQ6VMQ6 1270 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 AMOTL2Q9Y2J4 779 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 EID1Q9Y6B2 187 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 ABCC11Q96J66 1382 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 ACEP12821 1306 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 USHBP1Q8N6Y0 703 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 PRR36Q9H6K5 1346 aa19.73■□□□□ 0.75
SCARF1-203ENST00000434376 AMPHP49418 695 aa19.72■□□□□ 0.75
SCARF1-203ENST00000434376 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
SCARF1-203ENST00000434376 FOXD4L1Q9NU39 408 aa19.72■□□□□ 0.75
SCARF1-203ENST00000434376 NRXN1Q9ULB1 1477 aa19.72■□□□□ 0.75
SCARF1-203ENST00000434376 ANKRD45Q5TZF3 282 aa19.71■□□□□ 0.75
SCARF1-203ENST00000434376 MYO5BQ9ULV0 1848 aa19.71■□□□□ 0.75
SCARF1-203ENST00000434376 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
SCARF1-203ENST00000434376 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
SCARF1-203ENST00000434376 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
SCARF1-203ENST00000434376 HDGFP51858 240 aaKnown RBP19.7■□□□□ 0.74
SCARF1-203ENST00000434376 NLRP6P59044 892 aa19.7■□□□□ 0.74
SCARF1-203ENST00000434376 MBIPQ9NS73 344 aa19.69■□□□□ 0.74
SCARF1-203ENST00000434376 FCHSD2O94868 740 aa19.68■□□□□ 0.74
SCARF1-203ENST00000434376 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-203ENST00000434376 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCARF1-203ENST00000434376 UPF2Q9HAU5 1272 aaKnown RBP19.68■□□□□ 0.74
SCARF1-203ENST00000434376 NFE2L2Q16236 605 aa19.68■□□□□ 0.74
SCARF1-203ENST00000434376 PPLO60437 1756 aa19.67■□□□□ 0.74
SCARF1-203ENST00000434376 TNRQ92752 1358 aa19.66■□□□□ 0.74
SCARF1-203ENST00000434376 PTPRMP28827 1452 aa19.66■□□□□ 0.74
SCARF1-203ENST00000434376 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
SCARF1-203ENST00000434376 EIF4A2Q14240 407 aaKnown RBP19.65■□□□□ 0.74
SCARF1-203ENST00000434376 RIMBP3CA6NJZ7 1639 aa19.64■□□□□ 0.74
SCARF1-203ENST00000434376 RIMBP3BA6NNM3 1639 aa19.64■□□□□ 0.74
SCARF1-203ENST00000434376 RIMBP3Q9UFD9 1639 aa19.64■□□□□ 0.74
SCARF1-203ENST00000434376 IPO8O15397 1037 aaKnown RBP19.64■□□□□ 0.73
SCARF1-203ENST00000434376 A2ML1A8K2U0 1454 aa19.64■□□□□ 0.73
SCARF1-203ENST00000434376 F6X3S4 739 aa19.63■□□□□ 0.73
SCARF1-203ENST00000434376 IL13P35225 146 aa19.63■□□□□ 0.73
SCARF1-203ENST00000434376 NGEFQ8N5V2 710 aa19.63■□□□□ 0.73
SCARF1-203ENST00000434376 DDX19BQ9UMR2 479 aa19.63■□□□□ 0.73
SCARF1-203ENST00000434376 PNNQ9H307 717 aaKnown RBP19.63■□□□□ 0.73
SCARF1-203ENST00000434376 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
SCARF1-203ENST00000434376 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
SCARF1-203ENST00000434376 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
SCARF1-203ENST00000434376 ABTB2Q8N961 1025 aa19.61■□□□□ 0.73
SCARF1-203ENST00000434376 KCNA6P17658 529 aa19.61■□□□□ 0.73
SCARF1-203ENST00000434376 TTC21BQ7Z4L5 1316 aa19.61■□□□□ 0.73
SCARF1-203ENST00000434376 CCDC27Q2M243 656 aa19.6■□□□□ 0.73
SCARF1-203ENST00000434376 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms